RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 ATP10DQ9P241 1426 aa37.26■■■■□ 3.56
PABPN1-201ENST00000216727 RNMTO43148 476 aaKnown RBP37.25■■■■□ 3.55
PABPN1-201ENST00000216727 EIF4A1P60842 406 aaKnown RBP37.25■■■■□ 3.55
PABPN1-201ENST00000216727 CHMP4AQ9BY43 222 aa37.25■■■■□ 3.55
PABPN1-201ENST00000216727 ANKRD44Q8N8A2 993 aa37.24■■■■□ 3.55
PABPN1-201ENST00000216727 LNPKQ9C0E8 428 aa37.24■■■■□ 3.55
PABPN1-201ENST00000216727 MPRIPQ6WCQ1 1025 aa37.24■■■■□ 3.55
PABPN1-201ENST00000216727 SEC24BO95487 1268 aa37.23■■■■□ 3.55
PABPN1-201ENST00000216727 CPDO75976 1380 aa37.23■■■■□ 3.55
PABPN1-201ENST00000216727 PLEKHG2Q9H7P9 1386 aa37.22■■■■□ 3.55
PABPN1-201ENST00000216727 ANKRD45Q5TZF3 282 aa37.22■■■■□ 3.55
PABPN1-201ENST00000216727 HDGFL1Q5TGJ6 251 aa37.21■■■■□ 3.55
PABPN1-201ENST00000216727 ADAMTS7Q9UKP4 1686 aa37.21■■■■□ 3.55
PABPN1-201ENST00000216727 MEIS3Q99687 375 aa37.2■■■■□ 3.55
PABPN1-201ENST00000216727 DCTPP1Q9H773 170 aa37.2■■■■□ 3.55
PABPN1-201ENST00000216727 F6X3S4 739 aa37.2■■■■□ 3.55
PABPN1-201ENST00000216727 ZNF335Q9H4Z2 1342 aaPredicted RBP37.19■■■■□ 3.54
PABPN1-201ENST00000216727 BTBD11A6QL63 1104 aa37.19■■■■□ 3.54
PABPN1-201ENST00000216727 CEP85Q6P2H3 762 aa37.19■■■■□ 3.54
PABPN1-201ENST00000216727 CABLES1Q8TDN4 633 aa37.19■■■■□ 3.54
PABPN1-201ENST00000216727 FKBP5Q13451 457 aaPredicted RBP37.19■■■■□ 3.54
PABPN1-201ENST00000216727 SLC4A10Q6U841 1118 aa37.18■■■■□ 3.54
PABPN1-201ENST00000216727 RAPGEF4Q8WZA2 1011 aa37.17■■■■□ 3.54
PABPN1-201ENST00000216727 PXDNLA1KZ92 1463 aa37.17■■■■□ 3.54
PABPN1-201ENST00000216727 NLRP2Q9NX02 1062 aa37.17■■■■□ 3.54
PABPN1-201ENST00000216727 NECTIN2Q92692 538 aa37.16■■■■□ 3.54
PABPN1-201ENST00000216727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP37.15■■■■□ 3.542e-15■■□□□ 12.5
PABPN1-201ENST00000216727 SLAIN2Q9P270 581 aa37.15■■■■□ 3.54
PABPN1-201ENST00000216727 N4BP2Q86UW6 1770 aaPredicted RBP37.15■■■■□ 3.54
PABPN1-201ENST00000216727 UPF2Q9HAU5 1272 aaKnown RBP37.14■■■■□ 3.54
PABPN1-201ENST00000216727 SOS2Q07890 1332 aaPredicted RBP37.13■■■■□ 3.54
PABPN1-201ENST00000216727 SIPA1L3O60292 1781 aaPredicted RBP37.13■■■■□ 3.53
PABPN1-201ENST00000216727 KCNQ3O43525 872 aa37.12■■■■□ 3.53
PABPN1-201ENST00000216727 TATP17735 454 aaPredicted RBP37.11■■■■□ 3.53
PABPN1-201ENST00000216727 BMP2KLQ5H9B9 411 aa37.1■■■■□ 3.53
PABPN1-201ENST00000216727 HEG1Q9ULI3 1381 aa37.1■■■■□ 3.53
PABPN1-201ENST00000216727 CSB-PGBD3P0DP91 1061 aa37.09■■■■□ 3.53
PABPN1-201ENST00000216727 CHRNA2Q15822 529 aa37.09■■■■□ 3.53
PABPN1-201ENST00000216727 SPG7Q9UQ90 795 aa37.09■■■■□ 3.53
PABPN1-201ENST00000216727 MEGF6O75095 1541 aa37.08■■■■□ 3.53
PABPN1-201ENST00000216727 GNAI3P08754 354 aa37.07■■■■□ 3.53
PABPN1-201ENST00000216727 HMMRO75330 724 aa37.07■■■■□ 3.52
PABPN1-201ENST00000216727 TBC1D32Q96NH3 1257 aa37.07■■■■□ 3.52
PABPN1-201ENST00000216727 GNAI2P04899 355 aa37.06■■■■□ 3.52
PABPN1-201ENST00000216727 EIF2S2P20042 333 aaKnown RBP37.06■■■■□ 3.52
PABPN1-201ENST00000216727 PHAXQ9H814 394 aaKnown RBP37.05■■■■□ 3.52
PABPN1-201ENST00000216727 PHKG2P15735 406 aa37.03■■■■□ 3.52
PABPN1-201ENST00000216727 CHPF2Q9P2E5 772 aa37.03■■■■□ 3.52
PABPN1-201ENST00000216727 SCN11AQ9UI33 1791 aa37.03■■■■□ 3.52
PABPN1-201ENST00000216727 GIGYF1O75420 1035 aaPredicted RBP37.02■■■■□ 3.52
PABPN1-201ENST00000216727 KDM6AO15550 1401 aaPredicted RBP37.01■■■■□ 3.51
PABPN1-201ENST00000216727 IFNL2Q8IZJ0 200 aa37■■■■□ 3.51
PABPN1-201ENST00000216727 DAXXQ9UER7 740 aaPredicted RBP37■■■■□ 3.51
PABPN1-201ENST00000216727 PKD1L3Q7Z443 1732 aa37■■■■□ 3.51
PABPN1-201ENST00000216727 DBF4Q9UBU7 674 aaPredicted RBP36.99■■■■□ 3.51
PABPN1-201ENST00000216727 SLC52A2Q9HAB3 445 aa36.98■■■■□ 3.51
PABPN1-201ENST00000216727 MYT1Q01538 1121 aa36.97■■■■□ 3.51
PABPN1-201ENST00000216727 PLEKHM2Q8IWE5 1019 aa36.96■■■■□ 3.51
PABPN1-201ENST00000216727 USP44Q9H0E7 712 aa36.95■■■■□ 3.51
PABPN1-201ENST00000216727 PRDM11Q9NQV5 511 aa36.95■■■■□ 3.51
PABPN1-201ENST00000216727 SRCIN1Q9C0H9 1055 aa36.93■■■■□ 3.5
PABPN1-201ENST00000216727 MRC1P22897 1456 aa36.93■■■■□ 3.5
PABPN1-201ENST00000216727 NHSL1Q5SYE7 1610 aa36.93■■■■□ 3.5
PABPN1-201ENST00000216727 WDR17Q8IZU2 1322 aa36.93■■■■□ 3.5
PABPN1-201ENST00000216727 DCAF5Q96JK2 942 aa36.93■■■■□ 3.5
PABPN1-201ENST00000216727 HSP90AB1P08238 724 aaKnown RBP36.92■■■■□ 3.5
PABPN1-201ENST00000216727 ATP8B2P98198 1209 aa36.92■■■■□ 3.5
PABPN1-201ENST00000216727 ZNF790Q6PG37 636 aa36.92■■■■□ 3.5
PABPN1-201ENST00000216727 DNAAF4Q8WXU2 420 aa36.92■■■■□ 3.5
PABPN1-201ENST00000216727 ABCA3Q99758 1704 aa36.91■■■■□ 3.5
PABPN1-201ENST00000216727 CYP27B1O15528 508 aa36.9■■■■□ 3.5
PABPN1-201ENST00000216727 PI4KAP2A4QPH2 592 aa36.9■■■■□ 3.5
PABPN1-201ENST00000216727 SLC4A3P48751 1232 aa36.9■■■■□ 3.5
PABPN1-201ENST00000216727 MFAP1P55081 439 aaKnown RBP36.9■■■■□ 3.5
PABPN1-201ENST00000216727 PI4KAP1Q8N8J0 262 aa36.9■■■■□ 3.5
PABPN1-201ENST00000216727 C22orf23Q9BZE7 217 aa36.9■■■■□ 3.5
PABPN1-201ENST00000216727 UBTFL1P0CB47 393 aaPredicted RBP36.89■■■■□ 3.5
PABPN1-201ENST00000216727 BEND3Q5T5X7 828 aa36.88■■■■□ 3.5
PABPN1-201ENST00000216727 COL5A2P05997 1499 aaPredicted RBP36.88■■■■□ 3.49
PABPN1-201ENST00000216727 ADCY9O60503 1353 aa36.88■■■■□ 3.49
PABPN1-201ENST00000216727 NFATC2IPQ8NCF5 419 aa36.87■■■■□ 3.49
PABPN1-201ENST00000216727 LRRFIP2Q9Y608 721 aaKnown RBP36.87■■■■□ 3.49
PABPN1-201ENST00000216727 BECN1Q14457 450 aa36.86■■■■□ 3.49
PABPN1-201ENST00000216727 HYPKQ9NX55 129 aa36.86■■■■□ 3.49
PABPN1-201ENST00000216727 PARP4Q9UKK3 1724 aaKnown RBP36.85■■■■□ 3.49
PABPN1-201ENST00000216727 ANXA1P04083 346 aa36.85■■■■□ 3.49
PABPN1-201ENST00000216727 C16orf71Q8IYS4 520 aaPredicted RBP36.85■■■■□ 3.49
PABPN1-201ENST00000216727 TTC22Q5TAA0 569 aa36.85■■■■□ 3.49
PABPN1-201ENST00000216727 GSPT1P15170 499 aaKnown RBP36.84■■■■□ 3.49
PABPN1-201ENST00000216727 PRAMEF22A3QJZ6 481 aa36.83■■■■□ 3.49
PABPN1-201ENST00000216727 PNMA6EA0A0J9YXQ4 647 aa36.83■■■■□ 3.49
PABPN1-201ENST00000216727 DDX21Q9NR30 783 aaKnown RBP eCLIP36.83■■■■□ 3.49
PABPN1-201ENST00000216727 SMARCA5O60264 1052 aaPredicted RBP36.81■■■■□ 3.48
PABPN1-201ENST00000216727 SLC39A6Q13433 755 aa36.81■■■■□ 3.48
PABPN1-201ENST00000216727 PROSER3Q2NL68 480 aa36.81■■■■□ 3.48
PABPN1-201ENST00000216727 TOM1L2Q6ZVM7 507 aa36.81■■■■□ 3.48
PABPN1-201ENST00000216727 KSR2Q6VAB6 950 aa36.81■■■■□ 3.48
PABPN1-201ENST00000216727 TBC1D9Q6ZT07 1266 aa36.8■■■■□ 3.48
PABPN1-201ENST00000216727 CDC45O75419 566 aa36.8■■■■□ 3.48
PABPN1-201ENST00000216727 APBB1O00213 710 aa36.79■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms