RNA–Protein interactions for RNA: ENST00000216489.7

ALKBH1-201, Transcript of alkB homolog 1, histone H2A dioxygenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALKBH1, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH1-201ENST00000216489 FLIIQ13045 1269 aa17.06■□□□□ 0.32
ALKBH1-201ENST00000216489 AMOTQ4VCS5 1084 aa17.06■□□□□ 0.32
ALKBH1-201ENST00000216489 C1orf141Q5JVX7 400 aa17.06■□□□□ 0.32
ALKBH1-201ENST00000216489 TEFQ10587 303 aa17.06■□□□□ 0.32
ALKBH1-201ENST00000216489 CHRNA2Q15822 529 aa17.06■□□□□ 0.32
ALKBH1-201ENST00000216489 FKBP5Q13451 457 aaPredicted RBP17.05■□□□□ 0.32
ALKBH1-201ENST00000216489 RNMTO43148 476 aaKnown RBP17.05■□□□□ 0.32
ALKBH1-201ENST00000216489 HDGFL1Q5TGJ6 251 aa17.05■□□□□ 0.32
ALKBH1-201ENST00000216489 NLRP2Q9NX02 1062 aa17.05■□□□□ 0.32
ALKBH1-201ENST00000216489 CRYBG1Q9Y4K1 1723 aa17.05■□□□□ 0.32
ALKBH1-201ENST00000216489 COL18A1P39060 1754 aa17.05■□□□□ 0.32
ALKBH1-201ENST00000216489 SPATA31A3Q5VYP0 1347 aa17.04■□□□□ 0.32
ALKBH1-201ENST00000216489 EIF4A1P60842 406 aaKnown RBP17.04■□□□□ 0.32
ALKBH1-201ENST00000216489 BRINP3Q76B58 766 aa17.04■□□□□ 0.32
ALKBH1-201ENST00000216489 BTBD11A6QL63 1104 aa17.04■□□□□ 0.32
ALKBH1-201ENST00000216489 CEP85Q6P2H3 762 aa17.04■□□□□ 0.32
ALKBH1-201ENST00000216489 EIF2S2P20042 333 aaKnown RBP17.03■□□□□ 0.32
ALKBH1-201ENST00000216489 ANKRD44Q8N8A2 993 aa17.03■□□□□ 0.32
ALKBH1-201ENST00000216489 CCT4P50991 539 aaKnown RBP17.02■□□□□ 0.32
ALKBH1-201ENST00000216489 SOS1Q07889 1333 aaPredicted RBP17.02■□□□□ 0.32
ALKBH1-201ENST00000216489 CSB-PGBD3P0DP91 1061 aa17.02■□□□□ 0.31
ALKBH1-201ENST00000216489 PHAXQ9H814 394 aaKnown RBP17.02■□□□□ 0.31
ALKBH1-201ENST00000216489 CACNA1FO60840 1977 aa17.02■□□□□ 0.31
ALKBH1-201ENST00000216489 NBR1Q14596 966 aa17■□□□□ 0.31
ALKBH1-201ENST00000216489 RAPGEF4Q8WZA2 1011 aa17■□□□□ 0.31
ALKBH1-201ENST00000216489 DCTPP1Q9H773 170 aa17■□□□□ 0.31
ALKBH1-201ENST00000216489 MEGF6O75095 1541 aa17■□□□□ 0.31
ALKBH1-201ENST00000216489 RPAP2Q8IXW5 612 aaPredicted RBP16.99■□□□□ 0.31
ALKBH1-201ENST00000216489 CHPF2Q9P2E5 772 aa16.99■□□□□ 0.31
ALKBH1-201ENST00000216489 APBB1O00213 710 aa16.99■□□□□ 0.31
ALKBH1-201ENST00000216489 UPF2Q9HAU5 1272 aaKnown RBP16.99■□□□□ 0.31
ALKBH1-201ENST00000216489 SIPA1L3O60292 1781 aaPredicted RBP16.99■□□□□ 0.31
ALKBH1-201ENST00000216489 OVOS2A0A0G2JMS6 1433 aa16.99■□□□□ 0.31
ALKBH1-201ENST00000216489 ANXA1P04083 346 aa16.98■□□□□ 0.31
ALKBH1-201ENST00000216489 MFAP1P55081 439 aaKnown RBP16.98■□□□□ 0.31
ALKBH1-201ENST00000216489 N4BP2Q86UW6 1770 aaPredicted RBP16.98■□□□□ 0.31
ALKBH1-201ENST00000216489 TATP17735 454 aaPredicted RBP16.97■□□□□ 0.31
ALKBH1-201ENST00000216489 TBC1D32Q96NH3 1257 aa16.97■□□□□ 0.31
ALKBH1-201ENST00000216489 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
ALKBH1-201ENST00000216489 DAXXQ9UER7 740 aaPredicted RBP16.97■□□□□ 0.31
ALKBH1-201ENST00000216489 ADAMTS7Q9UKP4 1686 aa16.97■□□□□ 0.31
ALKBH1-201ENST00000216489 PRAMEF22A3QJZ6 481 aa16.96■□□□□ 0.31
ALKBH1-201ENST00000216489 SMARCA5O60264 1052 aaPredicted RBP16.96■□□□□ 0.31
ALKBH1-201ENST00000216489 C16orf71Q8IYS4 520 aaPredicted RBP16.96■□□□□ 0.31
ALKBH1-201ENST00000216489 KDM6AO15550 1401 aaPredicted RBP16.95■□□□□ 0.3
ALKBH1-201ENST00000216489 GNAI2P04899 355 aa16.95■□□□□ 0.3
ALKBH1-201ENST00000216489 HOXB7P09629 217 aa16.95■□□□□ 0.3
ALKBH1-201ENST00000216489 BMP2KLQ5H9B9 411 aa16.95■□□□□ 0.3
ALKBH1-201ENST00000216489 PXDNLA1KZ92 1463 aa16.95■□□□□ 0.3
ALKBH1-201ENST00000216489 CPDO75976 1380 aa16.95■□□□□ 0.3
ALKBH1-201ENST00000216489 OTUD7AQ8TE49 926 aaPredicted RBP16.94■□□□□ 0.3
ALKBH1-201ENST00000216489 SCN11AQ9UI33 1791 aa16.94■□□□□ 0.3
ALKBH1-201ENST00000216489 ABCC6O95255 1503 aa16.94■□□□□ 0.3
ALKBH1-201ENST00000216489 PHKG2P15735 406 aa16.94■□□□□ 0.3
ALKBH1-201ENST00000216489 PLEKHM2Q8IWE5 1019 aa16.93■□□□□ 0.3
ALKBH1-201ENST00000216489 SLC39A6Q13433 755 aa16.93■□□□□ 0.3
ALKBH1-201ENST00000216489 SPG7Q9UQ90 795 aa16.93■□□□□ 0.3
ALKBH1-201ENST00000216489 SOS2Q07890 1332 aaPredicted RBP16.93■□□□□ 0.3
ALKBH1-201ENST00000216489 HMMRO75330 724 aa16.92■□□□□ 0.3
ALKBH1-201ENST00000216489 GIGYF1O75420 1035 aaPredicted RBP16.92■□□□□ 0.3
ALKBH1-201ENST00000216489 GNAI3P08754 354 aa16.92■□□□□ 0.3
ALKBH1-201ENST00000216489 PROSER3Q2NL68 480 aa16.92■□□□□ 0.3
ALKBH1-201ENST00000216489 PRDM11Q9NQV5 511 aa16.92■□□□□ 0.3
ALKBH1-201ENST00000216489 LRRFIP2Q9Y608 721 aaKnown RBP16.92■□□□□ 0.3
ALKBH1-201ENST00000216489 GSPT1P15170 499 aaKnown RBP16.91■□□□□ 0.3
ALKBH1-201ENST00000216489 C22orf23Q9BZE7 217 aa16.91■□□□□ 0.3
ALKBH1-201ENST00000216489 USP44Q9H0E7 712 aa16.91■□□□□ 0.3
ALKBH1-201ENST00000216489 HEG1Q9ULI3 1381 aa16.91■□□□□ 0.3
ALKBH1-201ENST00000216489 PNMA6EA0A0J9YXQ4 647 aa16.91■□□□□ 0.3
ALKBH1-201ENST00000216489 PI4KAP2A4QPH2 592 aa16.91■□□□□ 0.3
ALKBH1-201ENST00000216489 PI4KAP1Q8N8J0 262 aa16.91■□□□□ 0.3
ALKBH1-201ENST00000216489 ABCA3Q99758 1704 aa16.91■□□□□ 0.3
ALKBH1-201ENST00000216489 PKD1L3Q7Z443 1732 aa16.9■□□□□ 0.3
ALKBH1-201ENST00000216489 SLC52A2Q9HAB3 445 aa16.9■□□□□ 0.3
ALKBH1-201ENST00000216489 EXOC6BQ9Y2D4 811 aa16.9■□□□□ 0.3
ALKBH1-201ENST00000216489 ADCY9O60503 1353 aa16.9■□□□□ 0.3
ALKBH1-201ENST00000216489 CYP27B1O15528 508 aa16.9■□□□□ 0.3
ALKBH1-201ENST00000216489 IFNL2Q8IZJ0 200 aa16.9■□□□□ 0.3
ALKBH1-201ENST00000216489 NFATC2IPQ8NCF5 419 aa16.9■□□□□ 0.3
ALKBH1-201ENST00000216489 SRCIN1Q9C0H9 1055 aa16.9■□□□□ 0.3
ALKBH1-201ENST00000216489 C5P01031 1676 aa16.9■□□□□ 0.3
ALKBH1-201ENST00000216489 UBTFL1P0CB47 393 aaPredicted RBP16.89■□□□□ 0.3
ALKBH1-201ENST00000216489 DBF4Q9UBU7 674 aaPredicted RBP16.89■□□□□ 0.3
ALKBH1-201ENST00000216489 DNAAF4Q8WXU2 420 aa16.89■□□□□ 0.29
ALKBH1-201ENST00000216489 TBC1D9Q6ZT07 1266 aa16.88■□□□□ 0.29
ALKBH1-201ENST00000216489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.88■□□□□ 0.29
ALKBH1-201ENST00000216489 TTC22Q5TAA0 569 aa16.88■□□□□ 0.29
ALKBH1-201ENST00000216489 ZNF790Q6PG37 636 aa16.88■□□□□ 0.29
ALKBH1-201ENST00000216489 ATP8B2P98198 1209 aa16.87■□□□□ 0.29
ALKBH1-201ENST00000216489 BEND3Q5T5X7 828 aa16.87■□□□□ 0.29
ALKBH1-201ENST00000216489 TOM1L2Q6ZVM7 507 aa16.87■□□□□ 0.29
ALKBH1-201ENST00000216489 CHMP4AQ9BY43 222 aa16.87■□□□□ 0.29
ALKBH1-201ENST00000216489 WDR17Q8IZU2 1322 aa16.87■□□□□ 0.29
ALKBH1-201ENST00000216489 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
ALKBH1-201ENST00000216489 NHSL1Q5SYE7 1610 aa16.86■□□□□ 0.29
ALKBH1-201ENST00000216489 NBPF7P0C2Y1 421 aaPredicted RBP16.86■□□□□ 0.29
ALKBH1-201ENST00000216489 BECN1Q14457 450 aa16.86■□□□□ 0.29
ALKBH1-201ENST00000216489 MAP3K2Q9Y2U5 619 aa16.85■□□□□ 0.29
ALKBH1-201ENST00000216489 MRC1P22897 1456 aa16.85■□□□□ 0.29
ALKBH1-201ENST00000216489 CDC45O75419 566 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms