RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 SMARCC1Q92922 1105 aaPredicted RBP26.4■■□□□ 1.82
RHBDD3-201ENST00000216085 SALL2Q9Y467 1007 aaPredicted RBP26.4■■□□□ 1.82
RHBDD3-201ENST00000216085 BTAF1O14981 1849 aa26.4■■□□□ 1.82
RHBDD3-201ENST00000216085 TNS1Q9HBL0 1735 aaKnown RBP26.39■■□□□ 1.82
RHBDD3-201ENST00000216085 THUMPD2Q9BTF0 503 aaKnown RBP26.39■■□□□ 1.82
RHBDD3-201ENST00000216085 SENP3-EIF4A1A0A087X0R7 540 aa26.38■■□□□ 1.81
RHBDD3-201ENST00000216085 BAG6P46379 1132 aa26.38■■□□□ 1.81
RHBDD3-201ENST00000216085 TAF7Q15545 349 aaPredicted RBP26.38■■□□□ 1.81
RHBDD3-201ENST00000216085 WWC1Q8IX03 1113 aa26.38■■□□□ 1.81
RHBDD3-201ENST00000216085 BTBD11A6QL63 1104 aa26.37■■□□□ 1.81
RHBDD3-201ENST00000216085 TTC5Q8N0Z6 440 aa26.37■■□□□ 1.81
RHBDD3-201ENST00000216085 PTF1AQ7RTS3 328 aa26.36■■□□□ 1.81
RHBDD3-201ENST00000216085 UPF1Q92900 1129 aaKnown RBP eCLIP26.36■■□□□ 1.81
RHBDD3-201ENST00000216085 SIPA1L3O60292 1781 aaPredicted RBP26.36■■□□□ 1.81
RHBDD3-201ENST00000216085 HNRNPUQ00839 825 aaKnown RBP eCLIP26.35■■□□□ 1.81
RHBDD3-201ENST00000216085 BABAM1Q9NWV8 329 aa26.35■■□□□ 1.81
RHBDD3-201ENST00000216085 PALLDQ8WX93 1383 aa26.34■■□□□ 1.81
RHBDD3-201ENST00000216085 PLSCR1O15162 318 aa26.33■■□□□ 1.81
RHBDD3-201ENST00000216085 WDR63Q8IWG1 891 aa26.33■■□□□ 1.8
RHBDD3-201ENST00000216085 ATG3Q9NT62 314 aa26.32■■□□□ 1.8
RHBDD3-201ENST00000216085 TSPYL4Q9UJ04 414 aa26.32■■□□□ 1.8
RHBDD3-201ENST00000216085 ASAP1Q9ULH1 1129 aa26.32■■□□□ 1.8
RHBDD3-201ENST00000216085 GNAI1P63096 354 aa26.31■■□□□ 1.8
RHBDD3-201ENST00000216085 IFT57Q9NWB7 429 aa26.31■■□□□ 1.8
RHBDD3-201ENST00000216085 LAS1LQ9Y4W2 734 aaKnown RBP26.31■■□□□ 1.8
RHBDD3-201ENST00000216085 RGPD3A6NKT7 1758 aaPredicted RBP26.31■■□□□ 1.8
RHBDD3-201ENST00000216085 RGPD4Q7Z3J3 1758 aa26.31■■□□□ 1.8
RHBDD3-201ENST00000216085 IL16Q14005 1332 aa26.31■■□□□ 1.8
RHBDD3-201ENST00000216085 HMGB2P26583 209 aaKnown RBP26.3■■□□□ 1.8
RHBDD3-201ENST00000216085 ZNF790Q6PG37 636 aa26.3■■□□□ 1.8
RHBDD3-201ENST00000216085 CFAP44Q96MT7 982 aa26.3■■□□□ 1.8
RHBDD3-201ENST00000216085 PAPPAQ13219 1627 aa26.3■■□□□ 1.8
RHBDD3-201ENST00000216085 SLC39A6Q13433 755 aa26.28■■□□□ 1.8
RHBDD3-201ENST00000216085 RBM42Q9BTD8 480 aaKnown RBP26.27■■□□□ 1.8
RHBDD3-201ENST00000216085 EN1Q05925 392 aaPredicted RBP26.26■■□□□ 1.79
RHBDD3-201ENST00000216085 SLC27A3Q5K4L6 730 aa26.26■■□□□ 1.79
RHBDD3-201ENST00000216085 FMNL2Q96PY5 1086 aa26.26■■□□□ 1.79
RHBDD3-201ENST00000216085 MIS18AQ9NYP9 233 aa26.26■■□□□ 1.79
RHBDD3-201ENST00000216085 CHL1O00533 1208 aa26.25■■□□□ 1.79
RHBDD3-201ENST00000216085 PTCD1O75127 700 aaKnown RBP26.25■■□□□ 1.79
RHBDD3-201ENST00000216085 ZNF521Q96K83 1311 aa26.25■■□□□ 1.79
RHBDD3-201ENST00000216085 LY75O60449 1722 aa26.25■■□□□ 1.79
RHBDD3-201ENST00000216085 KDM3BQ7LBC6 1761 aa26.25■■□□□ 1.79
RHBDD3-201ENST00000216085 LOC102724428A0A0B4J2F2 783 aa26.25■■□□□ 1.79
RHBDD3-201ENST00000216085 SIK1P57059 783 aa26.25■■□□□ 1.79
RHBDD3-201ENST00000216085 CCNL1Q9UK58 526 aaPredicted RBP26.25■■□□□ 1.79
RHBDD3-201ENST00000216085 GOLGA2Q08379 1002 aa26.24■■□□□ 1.79
RHBDD3-201ENST00000216085 DEFB132Q7Z7B7 95 aa26.24■■□□□ 1.79
RHBDD3-201ENST00000216085 MYH16Q9H6N6 1097 aa26.24■■□□□ 1.79
RHBDD3-201ENST00000216085 TXNRD1Q16881 649 aa26.23■■□□□ 1.79
RHBDD3-201ENST00000216085 UBR2Q8IWV8 1755 aa26.23■■□□□ 1.79
RHBDD3-201ENST00000216085 KCPQ6ZWJ8 1503 aa26.23■■□□□ 1.79
RHBDD3-201ENST00000216085 ZNF853P0CG23 659 aa26.23■■□□□ 1.79
RHBDD3-201ENST00000216085 CAMKK2Q96RR4 588 aa26.23■■□□□ 1.79
RHBDD3-201ENST00000216085 ZBED9Q6R2W3 1325 aa26.22■■□□□ 1.79
RHBDD3-201ENST00000216085 SOCS7O14512 581 aa26.22■■□□□ 1.79
RHBDD3-201ENST00000216085 ATP6V1AP38606 617 aa26.22■■□□□ 1.79
RHBDD3-201ENST00000216085 VSIG10Q8N0Z9 540 aa26.22■■□□□ 1.79
RHBDD3-201ENST00000216085 EZH2Q15910 746 aaKnown RBP26.21■■□□□ 1.79
RHBDD3-201ENST00000216085 MBIPQ9NS73 344 aa26.21■■□□□ 1.79
RHBDD3-201ENST00000216085 ZNF496Q96IT1 587 aaPredicted RBP26.2■■□□□ 1.79
RHBDD3-201ENST00000216085 HEG1Q9ULI3 1381 aa26.2■■□□□ 1.79
RHBDD3-201ENST00000216085 E9PSI1 815 aa26.2■■□□□ 1.78
RHBDD3-201ENST00000216085 ZNF831Q5JPB2 1677 aa26.2■■□□□ 1.78
RHBDD3-201ENST00000216085 KCNQ3O43525 872 aa26.19■■□□□ 1.78
RHBDD3-201ENST00000216085 TEX13AQ9BXU3 409 aaPredicted RBP26.19■■□□□ 1.78
RHBDD3-201ENST00000216085 EIF4A1P60842 406 aaKnown RBP26.18■■□□□ 1.78
RHBDD3-201ENST00000216085 SNRPA1P09661 255 aaKnown RBP26.18■■□□□ 1.78
RHBDD3-201ENST00000216085 RREB1Q92766 1687 aa26.16■■□□□ 1.78
RHBDD3-201ENST00000216085 FANCIQ9NVI1 1328 aa26.16■■□□□ 1.78
RHBDD3-201ENST00000216085 TSR2Q969E8 191 aaKnown RBP26.15■■□□□ 1.78
RHBDD3-201ENST00000216085 CICQ96RK0 1608 aaPredicted RBP26.15■■□□□ 1.78
RHBDD3-201ENST00000216085 PROM2Q8N271 834 aa26.15■■□□□ 1.78
RHBDD3-201ENST00000216085 YTHDC1Q96MU7 727 aaKnown RBP26.15■■□□□ 1.78
RHBDD3-201ENST00000216085 STARD3NLO95772 234 aa26.14■■□□□ 1.78
RHBDD3-201ENST00000216085 SLC4A9Q96Q91 983 aa26.13■■□□□ 1.77
RHBDD3-201ENST00000216085 LRRC4BQ9NT99 713 aa26.13■■□□□ 1.77
RHBDD3-201ENST00000216085 C5P01031 1676 aa26.12■■□□□ 1.77
RHBDD3-201ENST00000216085 GIGYF1O75420 1035 aaPredicted RBP26.12■■□□□ 1.77
RHBDD3-201ENST00000216085 KCNQ4P56696 695 aa26.12■■□□□ 1.77
RHBDD3-201ENST00000216085 SLFN5Q08AF3 891 aa26.12■■□□□ 1.77
RHBDD3-201ENST00000216085 CHMP4AQ9BY43 222 aa26.12■■□□□ 1.77
RHBDD3-201ENST00000216085 TJP1Q07157 1748 aa26.11■■□□□ 1.77
RHBDD3-201ENST00000216085 HOXB7P09629 217 aa26.11■■□□□ 1.77
RHBDD3-201ENST00000216085 ITPK1Q13572 414 aa26.11■■□□□ 1.77
RHBDD3-201ENST00000216085 NBPF14Q5TI25 921 aa26.11■■□□□ 1.77
RHBDD3-201ENST00000216085 DNAJC10Q8IXB1 793 aa26.11■■□□□ 1.77
RHBDD3-201ENST00000216085 SPINK5Q9NQ38 1064 aaPredicted RBP26.11■■□□□ 1.77
RHBDD3-201ENST00000216085 SOS1Q07889 1333 aaPredicted RBP26.11■■□□□ 1.77
RHBDD3-201ENST00000216085 NUP188Q5SRE5 1749 aa26.1■■□□□ 1.77
RHBDD3-201ENST00000216085 LINC00116Q8NCU8 138 aa26.09■■□□□ 1.77
RHBDD3-201ENST00000216085 TAF1LQ8IZX4 1826 aa26.09■■□□□ 1.77
RHBDD3-201ENST00000216085 LAMB4A4D0S4 1761 aa26.08■■□□□ 1.77
RHBDD3-201ENST00000216085 CDCA7LQ96GN5 454 aa26.08■■□□□ 1.77
RHBDD3-201ENST00000216085 AK7Q96M32 723 aa26.08■■□□□ 1.77
RHBDD3-201ENST00000216085 CNTNAP4Q9C0A0 1308 aa26.08■■□□□ 1.77
RHBDD3-201ENST00000216085 COL5A3P25940 1745 aaPredicted RBP26.08■■□□□ 1.77
RHBDD3-201ENST00000216085 DUSP27Q5VZP5 1158 aa26.07■■□□□ 1.76
RHBDD3-201ENST00000216085 STK32BQ9NY57 414 aa26.07■■□□□ 1.76
RHBDD3-201ENST00000216085 C4BP0C0L5 1744 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms