RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 CHL1O00533 1208 aa21.49■■□□□ 1.03
POLR2E-201ENST00000215587 NKX1-1Q15270 411 aaPredicted RBP21.49■■□□□ 1.03
POLR2E-201ENST00000215587 MBIPQ9NS73 344 aa21.49■■□□□ 1.03
POLR2E-201ENST00000215587 BABAM1Q9NWV8 329 aa21.49■■□□□ 1.03
POLR2E-201ENST00000215587 TSPYL4Q9UJ04 414 aa21.48■■□□□ 1.03
POLR2E-201ENST00000215587 SCN11AQ9UI33 1791 aa21.48■■□□□ 1.03
POLR2E-201ENST00000215587 BRWD3Q6RI45 1802 aa21.47■■□□□ 1.03
POLR2E-201ENST00000215587 MRC1P22897 1456 aa21.46■■□□□ 1.03
POLR2E-201ENST00000215587 SLC52A2Q9HAB3 445 aa21.46■■□□□ 1.03
POLR2E-201ENST00000215587 THSD7AQ9UPZ6 1657 aa21.46■■□□□ 1.03
POLR2E-201ENST00000215587 VIRMAQ69YN4 1812 aaKnown RBP21.44■■□□□ 1.02
POLR2E-201ENST00000215587 ERVV-2B6SEH9 535 aa21.44■■□□□ 1.02
POLR2E-201ENST00000215587 CT47B1P0C2W7 299 aaPredicted RBP21.44■■□□□ 1.02
POLR2E-201ENST00000215587 CABP4P57796 275 aa21.44■■□□□ 1.02
POLR2E-201ENST00000215587 EXOSC9Q06265 439 aaKnown RBP21.44■■□□□ 1.02
POLR2E-201ENST00000215587 RCAN3Q9UKA8 241 aa21.44■■□□□ 1.02
POLR2E-201ENST00000215587 PSDA5PKW4 1024 aaPredicted RBP21.43■■□□□ 1.02
POLR2E-201ENST00000215587 BTBD11A6QL63 1104 aa21.43■■□□□ 1.02
POLR2E-201ENST00000215587 MIS18AQ9NYP9 233 aa21.43■■□□□ 1.02
POLR2E-201ENST00000215587 SEPT12Q8IYM1 358 aa21.42■■□□□ 1.02
POLR2E-201ENST00000215587 SIPA1L3O60292 1781 aaPredicted RBP21.41■■□□□ 1.02
POLR2E-201ENST00000215587 ONECUT3O60422 494 aaPredicted RBP21.4■■□□□ 1.02
POLR2E-201ENST00000215587 MARCH10Q8NA82 808 aaPredicted RBP21.4■■□□□ 1.02
POLR2E-201ENST00000215587 NFATC2IPQ8NCF5 419 aa21.4■■□□□ 1.02
POLR2E-201ENST00000215587 BAG6P46379 1132 aa21.39■■□□□ 1.01
POLR2E-201ENST00000215587 KDM3BQ7LBC6 1761 aa21.38■■□□□ 1.01
POLR2E-201ENST00000215587 TOGARAM1Q9Y4F4 1720 aa21.38■■□□□ 1.01
POLR2E-201ENST00000215587 TMOD3Q9NYL9 352 aa21.38■■□□□ 1.01
POLR2E-201ENST00000215587 TWISTNBQ3B726 338 aaPredicted RBP21.37■■□□□ 1.01
POLR2E-201ENST00000215587 KRT27Q7Z3Y8 459 aa21.37■■□□□ 1.01
POLR2E-201ENST00000215587 C8orf58Q8NAV2 365 aa21.36■■□□□ 1.01
POLR2E-201ENST00000215587 ZNF428Q96B54 188 aa21.36■■□□□ 1.01
POLR2E-201ENST00000215587 SUPT16HQ9Y5B9 1047 aaKnown RBP21.36■■□□□ 1.01
POLR2E-201ENST00000215587 SOS1Q07889 1333 aaPredicted RBP21.35■■□□□ 1.01
POLR2E-201ENST00000215587 TTC5Q8N0Z6 440 aa21.35■■□□□ 1.01
POLR2E-201ENST00000215587 DOT1LQ8TEK3 1739 aa21.35■■□□□ 1.01
POLR2E-201ENST00000215587 ELL2O00472 640 aaPredicted RBP21.34■■□□□ 1.01
POLR2E-201ENST00000215587 EIF4A1P60842 406 aaKnown RBP21.34■■□□□ 1.01
POLR2E-201ENST00000215587 ZNF790Q6PG37 636 aa21.34■■□□□ 1.01
POLR2E-201ENST00000215587 TSPYL6Q8N831 410 aa21.34■■□□□ 1.01
POLR2E-201ENST00000215587 RARSP54136 660 aaKnown RBP21.33■■□□□ 1.01
POLR2E-201ENST00000215587 KRT24Q2M2I5 525 aa21.33■■□□□ 1.01
POLR2E-201ENST00000215587 SYTL4Q96C24 671 aaPredicted RBP21.33■■□□□ 1.01
POLR2E-201ENST00000215587 KCNQ3O43525 872 aa21.32■■□□□ 1
POLR2E-201ENST00000215587 VAMP4O75379 141 aa21.32■■□□□ 1
POLR2E-201ENST00000215587 SLC39A6Q13433 755 aa21.32■■□□□ 1
POLR2E-201ENST00000215587 BCL9O00512 1426 aa21.31■■□□□ 1
POLR2E-201ENST00000215587 PRIM1P49642 420 aaKnown RBP21.31■■□□□ 1
POLR2E-201ENST00000215587 ALDH1L2Q3SY69 923 aa21.31■■□□□ 1
POLR2E-201ENST00000215587 CHMP4AQ9BY43 222 aa21.31■■□□□ 1
POLR2E-201ENST00000215587 PAPPAQ13219 1627 aa21.3■■□□□ 1
POLR2E-201ENST00000215587 HOXB7P09629 217 aa21.3■■□□□ 1
POLR2E-201ENST00000215587 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.3■■□□□ 1
POLR2E-201ENST00000215587 PIGBQ92521 554 aa21.3■■□□□ 1
POLR2E-201ENST00000215587 ACSBG1Q96GR2 724 aa21.3■■□□□ 1
POLR2E-201ENST00000215587 SMC4Q9NTJ3 1288 aa21.3■■□□□ 1
POLR2E-201ENST00000215587 NEFLP07196 543 aa21.29■■□□□ 1
POLR2E-201ENST00000215587 FMNL2Q96PY5 1086 aa21.29■■□□□ 1
POLR2E-201ENST00000215587 ITGB4P16144 1822 aa21.29■■□□□ 1
POLR2E-201ENST00000215587 RNF123Q5XPI4 1314 aa21.29■■□□□ 1
POLR2E-201ENST00000215587 YY1P25490 414 aa21.28■■□□□ 1
POLR2E-201ENST00000215587 RRP1P56182 461 aaKnown RBP21.28■■□□□ 1
POLR2E-201ENST00000215587 SSH1Q8WYL5 1049 aa21.28■■□□□ 1
POLR2E-201ENST00000215587 HEG1Q9ULI3 1381 aa21.27■■□□□ 1
POLR2E-201ENST00000215587 BCAR3O75815 825 aa21.27■■□□□ 1
POLR2E-201ENST00000215587 R3HDM1Q15032 1099 aaKnown RBP21.27■■□□□ 1
POLR2E-201ENST00000215587 ZNF496Q96IT1 587 aaPredicted RBP21.27■■□□□ 1
POLR2E-201ENST00000215587 BCL2L13Q9BXK5 485 aa21.27■■□□□ 1
POLR2E-201ENST00000215587 CANXP27824 592 aaKnown RBP21.26■□□□□ 0.99
POLR2E-201ENST00000215587 CCDC30Q5VVM6 783 aa21.26■□□□□ 0.99
POLR2E-201ENST00000215587 KIF16BQ96L93 1317 aa21.26■□□□□ 0.99
POLR2E-201ENST00000215587 GIGYF1O75420 1035 aaPredicted RBP21.25■□□□□ 0.99
POLR2E-201ENST00000215587 EN1Q05925 392 aaPredicted RBP21.25■□□□□ 0.99
POLR2E-201ENST00000215587 HDGFL1Q5TGJ6 251 aa21.25■□□□□ 0.99
POLR2E-201ENST00000215587 STK31Q9BXU1 1019 aa21.25■□□□□ 0.99
POLR2E-201ENST00000215587 KCPQ6ZWJ8 1503 aa21.24■□□□□ 0.99
POLR2E-201ENST00000215587 UBR2Q8IWV8 1755 aa21.24■□□□□ 0.99
POLR2E-201ENST00000215587 SNRPA1P09661 255 aaKnown RBP21.24■□□□□ 0.99
POLR2E-201ENST00000215587 FAM182BQ5T319 152 aa21.24■□□□□ 0.99
POLR2E-201ENST00000215587 ATG3Q9NT62 314 aa21.24■□□□□ 0.99
POLR2E-201ENST00000215587 ASAP1Q9ULH1 1129 aa21.24■□□□□ 0.99
POLR2E-201ENST00000215587 PTCD1O75127 700 aaKnown RBP21.23■□□□□ 0.99
POLR2E-201ENST00000215587 NHSQ6T4R5 1651 aa21.23■□□□□ 0.99
POLR2E-201ENST00000215587 TCERG1O14776 1098 aaKnown RBP21.22■□□□□ 0.99
POLR2E-201ENST00000215587 EIF2S2P20042 333 aaKnown RBP21.22■□□□□ 0.99
POLR2E-201ENST00000215587 FAM196AQ6ZSG2 479 aa21.22■□□□□ 0.99
POLR2E-201ENST00000215587 MRPL50Q8N5N7 158 aaKnown RBP21.22■□□□□ 0.99
POLR2E-201ENST00000215587 FRAT1Q92837 279 aaPredicted RBP21.22■□□□□ 0.99
POLR2E-201ENST00000215587 SMARCC1Q92922 1105 aaPredicted RBP21.22■□□□□ 0.99
POLR2E-201ENST00000215587 KCNQ2O43526 872 aa21.21■□□□□ 0.99
POLR2E-201ENST00000215587 BRPF1P55201 1214 aaPredicted RBP21.21■□□□□ 0.99
POLR2E-201ENST00000215587 NECTIN2Q92692 538 aa21.21■□□□□ 0.99
POLR2E-201ENST00000215587 IPO8O15397 1037 aaKnown RBP21.2■□□□□ 0.98
POLR2E-201ENST00000215587 PLIN1O60240 522 aa21.2■□□□□ 0.98
POLR2E-201ENST00000215587 RBM42Q9BTD8 480 aaKnown RBP21.2■□□□□ 0.98
POLR2E-201ENST00000215587 C5P01031 1676 aa21.19■□□□□ 0.98
POLR2E-201ENST00000215587 VSIG10Q8N0Z9 540 aa21.19■□□□□ 0.98
POLR2E-201ENST00000215587 KAT6BQ8WYB5 2073 aa21.19■□□□□ 0.98
POLR2E-201ENST00000215587 ZKSCAN2Q63HK3 967 aa21.18■□□□□ 0.98
POLR2E-201ENST00000215587 TEX13AQ9BXU3 409 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms