RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 DDIT3P35638 169 aa18.39■□□□□ 0.54
EFNB1-201ENST00000204961 HDGFP51858 240 aaKnown RBP18.39■□□□□ 0.54
EFNB1-201ENST00000204961 TAF7Q15545 349 aaPredicted RBP18.39■□□□□ 0.54
EFNB1-201ENST00000204961 PA2G4Q9UQ80 394 aaKnown RBP18.39■□□□□ 0.54
EFNB1-201ENST00000204961 NBPF7P0C2Y1 421 aaPredicted RBP18.39■□□□□ 0.53
EFNB1-201ENST00000204961 MSNP26038 577 aaKnown RBP18.39■□□□□ 0.53
EFNB1-201ENST00000204961 IL17REQ8NFR9 667 aa18.39■□□□□ 0.53
EFNB1-201ENST00000204961 EID1Q9Y6B2 187 aa18.39■□□□□ 0.53
EFNB1-201ENST00000204961 GPT2Q8TD30 523 aa18.38■□□□□ 0.53
EFNB1-201ENST00000204961 ZDHHC9Q9Y397 364 aa18.38■□□□□ 0.53
EFNB1-201ENST00000204961 PRAMEF22A3QJZ6 481 aa18.38■□□□□ 0.53
EFNB1-201ENST00000204961 PPP1R42Q7Z4L9 355 aa18.38■□□□□ 0.53
EFNB1-201ENST00000204961 ZNF830Q96NB3 372 aaPredicted RBP18.38■□□□□ 0.53
EFNB1-201ENST00000204961 A2ML1A8K2U0 1454 aa18.38■□□□□ 0.53
EFNB1-201ENST00000204961 CIZ1Q9ULV3 898 aaPredicted RBP18.37■□□□□ 0.53
EFNB1-201ENST00000204961 VIRMAQ69YN4 1812 aaKnown RBP18.37■□□□□ 0.53
EFNB1-201ENST00000204961 PI4KAP2A4QPH2 592 aa18.37■□□□□ 0.53
EFNB1-201ENST00000204961 FOSBP53539 338 aa18.37■□□□□ 0.53
EFNB1-201ENST00000204961 PI4KAP1Q8N8J0 262 aa18.37■□□□□ 0.53
EFNB1-201ENST00000204961 LMBRD1Q9NUN5 540 aa18.37■□□□□ 0.53
EFNB1-201ENST00000204961 R3HCC1Q9Y3T6 440 aaKnown RBP18.37■□□□□ 0.53
EFNB1-201ENST00000204961 KCNJ4P48050 445 aa18.36■□□□□ 0.53
EFNB1-201ENST00000204961 SKOR2Q2VWA4 1001 aaPredicted RBP18.36■□□□□ 0.53
EFNB1-201ENST00000204961 TMEM63CQ9P1W3 806 aa18.36■□□□□ 0.53
EFNB1-201ENST00000204961 GADD45BO75293 160 aaPredicted RBP18.36■□□□□ 0.53
EFNB1-201ENST00000204961 CLCN1P35523 988 aa18.36■□□□□ 0.53
EFNB1-201ENST00000204961 GNAT3A8MTJ3 354 aa18.36■□□□□ 0.53
EFNB1-201ENST00000204961 NUCB2P80303 420 aa18.36■□□□□ 0.53
EFNB1-201ENST00000204961 CHPF2Q9P2E5 772 aa18.36■□□□□ 0.53
EFNB1-201ENST00000204961 PTCH1Q13635 1447 aa18.36■□□□□ 0.53
EFNB1-201ENST00000204961 FIBPO43427 364 aa18.35■□□□□ 0.53
EFNB1-201ENST00000204961 CCDC30Q5VVM6 783 aa18.35■□□□□ 0.53
EFNB1-201ENST00000204961 NDUFB9Q9Y6M9 179 aa18.35■□□□□ 0.53
EFNB1-201ENST00000204961 KLHDC4Q8TBB5 520 aa18.34■□□□□ 0.53
EFNB1-201ENST00000204961 TMEM131LA2VDJ0 1609 aa18.34■□□□□ 0.53
EFNB1-201ENST00000204961 KCNA6P17658 529 aa18.34■□□□□ 0.53
EFNB1-201ENST00000204961 TRHP20396 242 aaPredicted RBP18.34■□□□□ 0.53
EFNB1-201ENST00000204961 ESCO1Q5FWF5 840 aa18.34■□□□□ 0.53
EFNB1-201ENST00000204961 ESYT1Q9BSJ8 1104 aa18.34■□□□□ 0.53
EFNB1-201ENST00000204961 CCT4P50991 539 aaKnown RBP18.33■□□□□ 0.53
EFNB1-201ENST00000204961 FERMT3Q86UX7 667 aa18.33■□□□□ 0.53
EFNB1-201ENST00000204961 KLHL40Q2TBA0 621 aa18.33■□□□□ 0.52
EFNB1-201ENST00000204961 CWF19L2Q2TBE0 894 aaKnown RBP18.33■□□□□ 0.52
EFNB1-201ENST00000204961 USP44Q9H0E7 712 aa18.33■□□□□ 0.52
EFNB1-201ENST00000204961 NEO1Q92859 1461 aa18.33■□□□□ 0.52
EFNB1-201ENST00000204961 TEFQ10587 303 aa18.33■□□□□ 0.52
EFNB1-201ENST00000204961 DNTTIP2Q5QJE6 756 aaKnown RBP18.33■□□□□ 0.52
EFNB1-201ENST00000204961 KIAA1211Q6ZU35 1233 aa18.33■□□□□ 0.52
EFNB1-201ENST00000204961 BRPF1P55201 1214 aaPredicted RBP18.32■□□□□ 0.52
EFNB1-201ENST00000204961 MCCP23508 829 aa18.32■□□□□ 0.52
EFNB1-201ENST00000204961 CHMLP26374 656 aa18.32■□□□□ 0.52
EFNB1-201ENST00000204961 FAM13BQ9NYF5 915 aa18.32■□□□□ 0.52
EFNB1-201ENST00000204961 MED14O60244 1454 aa18.32■□□□□ 0.52
EFNB1-201ENST00000204961 PIK3R4Q99570 1358 aa18.32■□□□□ 0.52
EFNB1-201ENST00000204961 ATP10DQ9P241 1426 aa18.31■□□□□ 0.52
EFNB1-201ENST00000204961 MYL6BP14649 208 aa18.31■□□□□ 0.52
EFNB1-201ENST00000204961 C9orf78Q9NZ63 289 aaPredicted RBP18.31■□□□□ 0.52
EFNB1-201ENST00000204961 CPSF1Q10570 1443 aaKnown RBP18.31■□□□□ 0.52
EFNB1-201ENST00000204961 HAP1P54257 671 aaPredicted RBP18.31■□□□□ 0.52
EFNB1-201ENST00000204961 NCBP3Q53F19 620 aaKnown RBP18.31■□□□□ 0.52
EFNB1-201ENST00000204961 FAM173BQ6P4H8 233 aa18.31■□□□□ 0.52
EFNB1-201ENST00000204961 CCDC8Q9H0W5 538 aaPredicted RBP18.31■□□□□ 0.52
EFNB1-201ENST00000204961 ARHGAP31Q2M1Z3 1444 aa18.31■□□□□ 0.52
EFNB1-201ENST00000204961 VPS37CA5D8V6 355 aaPredicted RBP18.31■□□□□ 0.52
EFNB1-201ENST00000204961 C17orf53Q8N3J3 647 aaPredicted RBP18.31■□□□□ 0.52
EFNB1-201ENST00000204961 NECAB1Q8N987 351 aa18.31■□□□□ 0.52
EFNB1-201ENST00000204961 PSME1Q06323 249 aa18.3■□□□□ 0.52
EFNB1-201ENST00000204961 FAM177BA6PVY3 158 aa18.3■□□□□ 0.52
EFNB1-201ENST00000204961 STK3Q13188 491 aa18.3■□□□□ 0.52
EFNB1-201ENST00000204961 SLC39A6Q13433 755 aa18.3■□□□□ 0.52
EFNB1-201ENST00000204961 PREX1Q8TCU6 1659 aa18.3■□□□□ 0.52
EFNB1-201ENST00000204961 PTPRCP08575 1304 aa18.3■□□□□ 0.52
EFNB1-201ENST00000204961 GNAI3P08754 354 aa18.29■□□□□ 0.52
EFNB1-201ENST00000204961 ZC3H6P61129 1189 aaKnown RBP18.29■□□□□ 0.52
EFNB1-201ENST00000204961 SRCIN1Q9C0H9 1055 aa18.29■□□□□ 0.52
EFNB1-201ENST00000204961 SOS1Q07889 1333 aaPredicted RBP18.29■□□□□ 0.52
EFNB1-201ENST00000204961 TNRQ92752 1358 aa18.29■□□□□ 0.52
EFNB1-201ENST00000204961 NBPF6Q5VWK0 638 aa18.29■□□□□ 0.52
EFNB1-201ENST00000204961 NBPF4Q96M43 638 aa18.29■□□□□ 0.52
EFNB1-201ENST00000204961 NAP1L2Q9ULW6 460 aaPredicted RBP18.29■□□□□ 0.52
EFNB1-201ENST00000204961 HOXC9P31274 260 aa18.28■□□□□ 0.52
EFNB1-201ENST00000204961 PROSER3Q2NL68 480 aa18.28■□□□□ 0.52
EFNB1-201ENST00000204961 ZNF530Q6P9A1 599 aaPredicted RBP18.28■□□□□ 0.52
EFNB1-201ENST00000204961 RASEFQ8IZ41 740 aa18.28■□□□□ 0.52
EFNB1-201ENST00000204961 CNPY2Q9Y2B0 182 aa18.28■□□□□ 0.52
EFNB1-201ENST00000204961 CCDC83Q8IWF9 413 aa18.28■□□□□ 0.52
EFNB1-201ENST00000204961 ZNF330Q9Y3S2 320 aaPredicted RBP18.28■□□□□ 0.52
EFNB1-201ENST00000204961 ATP8B2P98198 1209 aa18.28■□□□□ 0.52
EFNB1-201ENST00000204961 COL9A3Q14050 684 aaPredicted RBP18.27■□□□□ 0.52
EFNB1-201ENST00000204961 EDC3Q96F86 508 aaKnown RBP18.27■□□□□ 0.52
EFNB1-201ENST00000204961 PRPF40BQ6NWY9 871 aaKnown RBP18.27■□□□□ 0.51
EFNB1-201ENST00000204961 TSC1Q92574 1164 aa18.27■□□□□ 0.51
EFNB1-201ENST00000204961 CASTP20810 708 aaKnown RBP18.26■□□□□ 0.51
EFNB1-201ENST00000204961 RHPN1Q8TCX5 695 aa18.26■□□□□ 0.51
EFNB1-201ENST00000204961 CLTCQ00610 1675 aaKnown RBP18.26■□□□□ 0.51
EFNB1-201ENST00000204961 DDX17Q92841 729 aaKnown RBP18.26■□□□□ 0.51
EFNB1-201ENST00000204961 RGS12O14924 1447 aa18.26■□□□□ 0.51
EFNB1-201ENST00000204961 ATP7BP35670 1465 aa18.26■□□□□ 0.51
EFNB1-201ENST00000204961 CHGBP05060 677 aa18.26■□□□□ 0.51
EFNB1-201ENST00000204961 BTBD11A6QL63 1104 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms