RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 CWC22Q9HCG8 908 aaKnown RBP18.01■□□□□ 0.47
TMEM38A-201ENST00000187762 DIAPH3Q9NSV4 1193 aa18.01■□□□□ 0.47
TMEM38A-201ENST00000187762 ZDHHC9Q9Y397 364 aa18.01■□□□□ 0.47
TMEM38A-201ENST00000187762 MON2Q7Z3U7 1717 aa18■□□□□ 0.47
TMEM38A-201ENST00000187762 GNAI1P63096 354 aa18■□□□□ 0.47
TMEM38A-201ENST00000187762 COG3Q96JB2 828 aa18■□□□□ 0.47
TMEM38A-201ENST00000187762 CHAMP1Q96JM3 812 aa18■□□□□ 0.47
TMEM38A-201ENST00000187762 IFT57Q9NWB7 429 aa18■□□□□ 0.47
TMEM38A-201ENST00000187762 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
TMEM38A-201ENST00000187762 SLFN14P0C7P3 912 aa18■□□□□ 0.47
TMEM38A-201ENST00000187762 C8orf58Q8NAV2 365 aa18■□□□□ 0.47
TMEM38A-201ENST00000187762 CTIFO43310 598 aaKnown RBP17.99■□□□□ 0.47
TMEM38A-201ENST00000187762 ZNF853P0CG23 659 aa17.99■□□□□ 0.47
TMEM38A-201ENST00000187762 BRPF1P55201 1214 aaPredicted RBP17.99■□□□□ 0.47
TMEM38A-201ENST00000187762 MAPK8IP2Q13387 824 aaPredicted RBP17.99■□□□□ 0.47
TMEM38A-201ENST00000187762 PTCH1Q13635 1447 aa17.99■□□□□ 0.47
TMEM38A-201ENST00000187762 TWISTNBQ3B726 338 aaPredicted RBP17.99■□□□□ 0.47
TMEM38A-201ENST00000187762 DNAJC2Q99543 621 aaKnown RBP17.99■□□□□ 0.47
TMEM38A-201ENST00000187762 CCDC66A2RUB6 948 aa17.98■□□□□ 0.47
TMEM38A-201ENST00000187762 ANKRD45Q5TZF3 282 aa17.98■□□□□ 0.47
TMEM38A-201ENST00000187762 ZNF428Q96B54 188 aa17.98■□□□□ 0.47
TMEM38A-201ENST00000187762 ITSN1Q15811 1721 aa17.98■□□□□ 0.47
TMEM38A-201ENST00000187762 CCDC61Q9Y6R9 512 aa17.98■□□□□ 0.47
TMEM38A-201ENST00000187762 PRR36Q9H6K5 1346 aa17.98■□□□□ 0.47
TMEM38A-201ENST00000187762 AKAP12Q02952 1782 aa17.98■□□□□ 0.47
TMEM38A-201ENST00000187762 CHAF1AQ13111 956 aaPredicted RBP17.97■□□□□ 0.47
TMEM38A-201ENST00000187762 ZGPATQ8N5A5 531 aaKnown RBP17.97■□□□□ 0.47
TMEM38A-201ENST00000187762 AATKQ6ZMQ8 1374 aa17.97■□□□□ 0.47
TMEM38A-201ENST00000187762 C3P01024 1663 aa17.97■□□□□ 0.47
TMEM38A-201ENST00000187762 SIRT2Q8IXJ6 389 aa17.96■□□□□ 0.47
TMEM38A-201ENST00000187762 PIK3R4Q99570 1358 aa17.96■□□□□ 0.47
TMEM38A-201ENST00000187762 NUTM2FA1L443 756 aa17.96■□□□□ 0.47
TMEM38A-201ENST00000187762 AEBP1Q8IUX7 1158 aa17.96■□□□□ 0.47
TMEM38A-201ENST00000187762 TIGD1Q96MW7 591 aa17.96■□□□□ 0.47
TMEM38A-201ENST00000187762 CFAP44Q96MT7 982 aa17.95■□□□□ 0.46
TMEM38A-201ENST00000187762 USP25Q9UHP3 1055 aa17.95■□□□□ 0.46
TMEM38A-201ENST00000187762 KNDC1Q76NI1 1749 aa17.95■□□□□ 0.46
TMEM38A-201ENST00000187762 ABCC4O15439 1325 aa17.95■□□□□ 0.46
TMEM38A-201ENST00000187762 UVSSAQ2YD98 709 aa17.95■□□□□ 0.46
TMEM38A-201ENST00000187762 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.95■□□□□ 0.46
TMEM38A-201ENST00000187762 ARHGAP45Q92619 1136 aa17.95■□□□□ 0.46
TMEM38A-201ENST00000187762 CTNNA3Q9UI47 895 aa17.95■□□□□ 0.46
TMEM38A-201ENST00000187762 ESF1Q9H501 851 aaKnown RBP17.94■□□□□ 0.46
TMEM38A-201ENST00000187762 ADCY5O95622 1261 aa17.93■□□□□ 0.46
TMEM38A-201ENST00000187762 NCBP1Q09161 790 aaKnown RBP17.93■□□□□ 0.46
TMEM38A-201ENST00000187762 CDC45O75419 566 aa17.93■□□□□ 0.46
TMEM38A-201ENST00000187762 KRT24Q2M2I5 525 aa17.93■□□□□ 0.46
TMEM38A-201ENST00000187762 FAM184AQ8NB25 1140 aa17.92■□□□□ 0.46
TMEM38A-201ENST00000187762 SYAP1Q96A49 352 aaPredicted RBP17.92■□□□□ 0.46
TMEM38A-201ENST00000187762 DDX41Q9UJV9 622 aaKnown RBP17.92■□□□□ 0.46
TMEM38A-201ENST00000187762 ROBO2Q9HCK4 1378 aa17.92■□□□□ 0.46
TMEM38A-201ENST00000187762 LMOD3Q0VAK6 560 aa17.92■□□□□ 0.46
TMEM38A-201ENST00000187762 TERF2Q15554 542 aa17.92■□□□□ 0.46
TMEM38A-201ENST00000187762 GCC1Q96CN9 775 aa17.92■□□□□ 0.46
TMEM38A-201ENST00000187762 KIAA1524Q8TCG1 905 aa17.91■□□□□ 0.46
TMEM38A-201ENST00000187762 TECPR2O15040 1411 aa17.91■□□□□ 0.46
TMEM38A-201ENST00000187762 EIF4A2Q14240 407 aaKnown RBP17.91■□□□□ 0.46
TMEM38A-201ENST00000187762 FOXD4L5Q5VV16 416 aaPredicted RBP17.91■□□□□ 0.46
TMEM38A-201ENST00000187762 SULT6B1Q6IMI4 303 aa17.91■□□□□ 0.46
TMEM38A-201ENST00000187762 FOXD4L4Q8WXT5 416 aaPredicted RBP17.91■□□□□ 0.46
TMEM38A-201ENST00000187762 CHMP4AQ9BY43 222 aa17.91■□□□□ 0.46
TMEM38A-201ENST00000187762 TULP2O00295 520 aa17.9■□□□□ 0.46
TMEM38A-201ENST00000187762 SOX12O15370 315 aa17.9■□□□□ 0.46
TMEM38A-201ENST00000187762 CAPN2P17655 700 aa17.9■□□□□ 0.46
TMEM38A-201ENST00000187762 IRX3P78415 501 aaPredicted RBP17.9■□□□□ 0.46
TMEM38A-201ENST00000187762 PHF14O94880 888 aa17.89■□□□□ 0.46
TMEM38A-201ENST00000187762 MORC2Q9Y6X9 1032 aaPredicted RBP17.89■□□□□ 0.46
TMEM38A-201ENST00000187762 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.89■□□□□ 0.45
TMEM38A-201ENST00000187762 SYCP1Q15431 976 aa17.89■□□□□ 0.45
TMEM38A-201ENST00000187762 PYCARDQ9ULZ3 195 aa17.89■□□□□ 0.45
TMEM38A-201ENST00000187762 NRKQ7Z2Y5 1582 aa17.89■□□□□ 0.45
TMEM38A-201ENST00000187762 MCM10Q7L590 875 aa17.88■□□□□ 0.45
TMEM38A-201ENST00000187762 API5Q9BZZ5 524 aaKnown RBP17.88■□□□□ 0.45
TMEM38A-201ENST00000187762 TTC21BQ7Z4L5 1316 aa17.88■□□□□ 0.45
TMEM38A-201ENST00000187762 UBR1Q8IWV7 1749 aa17.87■□□□□ 0.45
TMEM38A-201ENST00000187762 CALCOCO1Q9P1Z2 691 aa17.87■□□□□ 0.45
TMEM38A-201ENST00000187762 ACEP12821 1306 aa17.87■□□□□ 0.45
TMEM38A-201ENST00000187762 TNRQ92752 1358 aa17.87■□□□□ 0.45
TMEM38A-201ENST00000187762 ST18O60284 1047 aa17.86■□□□□ 0.45
TMEM38A-201ENST00000187762 HSP90AB2PQ58FF8 381 aa17.86■□□□□ 0.45
TMEM38A-201ENST00000187762 ZFP91Q96JP5 570 aaPredicted RBP17.86■□□□□ 0.45
TMEM38A-201ENST00000187762 KCNF1Q9H3M0 494 aa17.86■□□□□ 0.45
TMEM38A-201ENST00000187762 PEAK1Q9H792 1746 aa17.86■□□□□ 0.45
TMEM38A-201ENST00000187762 SIRT1Q96EB6 747 aa17.86■□□□□ 0.45
TMEM38A-201ENST00000187762 USP26Q9BXU7 913 aa17.86■□□□□ 0.45
TMEM38A-201ENST00000187762 TMEM2Q9UHN6 1383 aa17.86■□□□□ 0.45
TMEM38A-201ENST00000187762 ADAMTS13Q76LX8 1427 aa17.85■□□□□ 0.45
TMEM38A-201ENST00000187762 TRIM6-TRIM34B2RNG4 842 aa17.85■□□□□ 0.45
TMEM38A-201ENST00000187762 HDGFP51858 240 aaKnown RBP17.85■□□□□ 0.45
TMEM38A-201ENST00000187762 TEX2Q8IWB9 1127 aa17.85■□□□□ 0.45
TMEM38A-201ENST00000187762 KIF18AQ8NI77 898 aa17.85■□□□□ 0.45
TMEM38A-201ENST00000187762 TRIM34Q9BYJ4 488 aa17.85■□□□□ 0.45
TMEM38A-201ENST00000187762 KIF13AQ9H1H9 1805 aa17.84■□□□□ 0.45
TMEM38A-201ENST00000187762 OVOS2A0A0J9YW53 1432 aa17.84■□□□□ 0.45
TMEM38A-201ENST00000187762 GSPT1P15170 499 aaKnown RBP17.84■□□□□ 0.45
TMEM38A-201ENST00000187762 OVOS2Q6IE36 1432 aa17.84■□□□□ 0.45
TMEM38A-201ENST00000187762 KRT222Q8N1A0 295 aa17.84■□□□□ 0.45
TMEM38A-201ENST00000187762 TOPAZ1Q8N9V7 1692 aa17.84■□□□□ 0.45
TMEM38A-201ENST00000187762 RGS12O14924 1447 aa17.83■□□□□ 0.45
TMEM38A-201ENST00000187762 ERICH4A6NGS2 130 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms