RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 UBR3Q6ZT12 1888 aa37.79■■■■□ 3.64
PDCD2-201ENST00000167218 U2SURPO15042 1029 aaKnown RBP37.79■■■■□ 3.64
PDCD2-201ENST00000167218 AMIGO3Q86WK7 504 aa37.79■■■■□ 3.64
PDCD2-201ENST00000167218 SLC4A9Q96Q91 983 aa37.79■■■■□ 3.64
PDCD2-201ENST00000167218 ATP6V1AP38606 617 aa37.78■■■■□ 3.64
PDCD2-201ENST00000167218 NFATC2IPQ8NCF5 419 aa37.78■■■■□ 3.64
PDCD2-201ENST00000167218 VIRMAQ69YN4 1812 aaKnown RBP37.77■■■■□ 3.64
PDCD2-201ENST00000167218 ZNF831Q5JPB2 1677 aa37.77■■■■□ 3.64
PDCD2-201ENST00000167218 ARXQ96QS3 562 aa37.77■■■■□ 3.64
PDCD2-201ENST00000167218 CFAP53Q96M91 514 aa37.76■■■■□ 3.64
PDCD2-201ENST00000167218 LGR6Q9HBX8 967 aa37.76■■■■□ 3.64
PDCD2-201ENST00000167218 AK7Q96M32 723 aa37.75■■■■□ 3.63
PDCD2-201ENST00000167218 FHDC1Q9C0D6 1143 aaPredicted RBP37.75■■■■□ 3.63
PDCD2-201ENST00000167218 FLAD1Q8NFF5 587 aa37.74■■■■□ 3.63
PDCD2-201ENST00000167218 ADAMTS7Q9UKP4 1686 aa37.74■■■■□ 3.63
PDCD2-201ENST00000167218 MSH5O43196 834 aa37.72■■■■□ 3.63
PDCD2-201ENST00000167218 SYT17Q9BSW7 474 aa37.72■■■■□ 3.63
PDCD2-201ENST00000167218 RNMTO43148 476 aaKnown RBP37.71■■■■□ 3.63
PDCD2-201ENST00000167218 SMIM5Q71RC9 77 aa37.71■■■■□ 3.63
PDCD2-201ENST00000167218 RBM42Q9BTD8 480 aaKnown RBP37.71■■■■□ 3.63
PDCD2-201ENST00000167218 SLC52A2Q9HAB3 445 aa37.7■■■■□ 3.63
PDCD2-201ENST00000167218 MRC1P22897 1456 aa37.7■■■■□ 3.63
PDCD2-201ENST00000167218 POLD1P28340 1107 aa37.69■■■■□ 3.62
PDCD2-201ENST00000167218 COL5A3P25940 1745 aaPredicted RBP37.68■■■■□ 3.62
PDCD2-201ENST00000167218 MAP3K5Q99683 1374 aa37.68■■■■□ 3.62
PDCD2-201ENST00000167218 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP37.67■■■■□ 3.62
PDCD2-201ENST00000167218 RSPH6AQ9H0K4 717 aa37.67■■■■□ 3.62
PDCD2-201ENST00000167218 SSFA2P28290 1259 aa37.66■■■■□ 3.62
PDCD2-201ENST00000167218 NUDCQ9Y266 331 aa37.65■■■■□ 3.62
PDCD2-201ENST00000167218 PTCD1O75127 700 aaKnown RBP37.64■■■■□ 3.62
PDCD2-201ENST00000167218 PHF14O94880 888 aa37.64■■■■□ 3.62
PDCD2-201ENST00000167218 MYH14Q7Z406 1995 aaKnown RBP37.64■■■■□ 3.62
PDCD2-201ENST00000167218 GNPATO15228 680 aa37.63■■■■□ 3.61
PDCD2-201ENST00000167218 MSL1Q68DK7 614 aa37.63■■■■□ 3.61
PDCD2-201ENST00000167218 PHACTR3Q96KR7 559 aa37.63■■■■□ 3.61
PDCD2-201ENST00000167218 PRKAR2BP31323 418 aa37.62■■■■□ 3.61
PDCD2-201ENST00000167218 GAS2L2Q8NHY3 880 aa37.62■■■■□ 3.61
PDCD2-201ENST00000167218 RC3H1Q5TC82 1133 aaKnown RBP37.61■■■■□ 3.61
PDCD2-201ENST00000167218 CICQ96RK0 1608 aaPredicted RBP37.6■■■■□ 3.61
PDCD2-201ENST00000167218 CNTNAP4Q9C0A0 1308 aa37.6■■■■□ 3.61
PDCD2-201ENST00000167218 U2AF1L5P0DN76 240 aaPredicted RBP37.59■■■■□ 3.61
PDCD2-201ENST00000167218 U2AF1Q01081 240 aaKnown RBP eCLIP37.59■■■■□ 3.61
PDCD2-201ENST00000167218 TJP1Q07157 1748 aa37.58■■■■□ 3.61
PDCD2-201ENST00000167218 IL17REQ8NFR9 667 aa37.58■■■■□ 3.61
PDCD2-201ENST00000167218 GNAT3A8MTJ3 354 aa37.57■■■■□ 3.6
PDCD2-201ENST00000167218 DDX10Q13206 875 aaKnown RBP37.57■■■■□ 3.6
PDCD2-201ENST00000167218 UTRNP46939 3433 aa37.56■■■■□ 3.6
PDCD2-201ENST00000167218 SLC39A6Q13433 755 aa37.56■■■■□ 3.6
PDCD2-201ENST00000167218 FCHSD2O94868 740 aa37.55■■■■□ 3.6
PDCD2-201ENST00000167218 RTCBQ9Y3I0 505 aaKnown RBP37.54■■■■□ 3.6
PDCD2-201ENST00000167218 KCPQ6ZWJ8 1503 aa37.52■■■■□ 3.6
PDCD2-201ENST00000167218 RPS6KA4O75676 772 aa37.52■■■■□ 3.6
PDCD2-201ENST00000167218 SIPA1L3O60292 1781 aaPredicted RBP37.52■■■■□ 3.6
PDCD2-201ENST00000167218 DCAF8L1A6NGE4 600 aa37.51■■■■□ 3.6
PDCD2-201ENST00000167218 TRAPPC3LQ5T215 181 aa37.5■■■■□ 3.59
PDCD2-201ENST00000167218 UBR2Q8IWV8 1755 aa37.5■■■■□ 3.59
PDCD2-201ENST00000167218 CRKLP46109 303 aaKnown RBP37.49■■■■□ 3.59
PDCD2-201ENST00000167218 KLHL34Q8N239 644 aa37.49■■■■□ 3.59
PDCD2-201ENST00000167218 CEMIPQ8WUJ3 1361 aa37.49■■■■□ 3.59
PDCD2-201ENST00000167218 ADRA2BP18089 450 aa37.48■■■■□ 3.59
PDCD2-201ENST00000167218 ARHGEF1Q92888 912 aaKnown RBP37.48■■■■□ 3.59
PDCD2-201ENST00000167218 RALBP1Q15311 655 aa37.47■■■■□ 3.59
PDCD2-201ENST00000167218 DNAJC10Q8IXB1 793 aa37.47■■■■□ 3.59
PDCD2-201ENST00000167218 NLGN2Q8NFZ4 835 aa37.46■■■■□ 3.59
PDCD2-201ENST00000167218 INTS5Q6P9B9 1019 aaKnown RBP37.45■■■■□ 3.59
PDCD2-201ENST00000167218 GOLGB1Q14789 3259 aaKnown RBP37.44■■■■□ 3.58
PDCD2-201ENST00000167218 TEFQ10587 303 aa37.44■■■■□ 3.58
PDCD2-201ENST00000167218 C4AP0C0L4 1744 aa37.44■■■■□ 3.58
PDCD2-201ENST00000167218 VSIG10Q8N0Z9 540 aa37.42■■■■□ 3.58
PDCD2-201ENST00000167218 CYP19A1P11511 503 aaPredicted RBP37.41■■■■□ 3.58
PDCD2-201ENST00000167218 ZNF790Q6PG37 636 aa37.39■■■■□ 3.58
PDCD2-201ENST00000167218 CD2APQ9Y5K6 639 aa37.39■■■■□ 3.58
PDCD2-201ENST00000167218 RFC4P35249 363 aa37.38■■■■□ 3.57
PDCD2-201ENST00000167218 PLEKHF1Q96S99 279 aa37.38■■■■□ 3.57
PDCD2-201ENST00000167218 GYS1P13807 737 aa37.37■■■■□ 3.57
PDCD2-201ENST00000167218 CCDC87Q9NVE4 849 aa37.37■■■■□ 3.57
PDCD2-201ENST00000167218 TTC5Q8N0Z6 440 aa37.36■■■■□ 3.57
PDCD2-201ENST00000167218 NLGN1Q8N2Q7 840 aa37.36■■■■□ 3.57
PDCD2-201ENST00000167218 ZNF496Q96IT1 587 aaPredicted RBP37.36■■■■□ 3.57
PDCD2-201ENST00000167218 ZEB1P37275 1124 aaPredicted RBP37.35■■■■□ 3.57
PDCD2-201ENST00000167218 MCM10Q7L590 875 aa37.35■■■■□ 3.57
PDCD2-201ENST00000167218 HTATSF1O43719 755 aaKnown RBP37.34■■■■□ 3.57
PDCD2-201ENST00000167218 MMP10P09238 476 aa37.34■■■■□ 3.57
PDCD2-201ENST00000167218 RTF1Q92541 710 aaKnown RBP37.33■■■■□ 3.57
PDCD2-201ENST00000167218 DLG5Q8TDM6 1919 aa37.33■■■■□ 3.57
PDCD2-201ENST00000167218 SOS1Q07889 1333 aaPredicted RBP37.33■■■■□ 3.57
PDCD2-201ENST00000167218 HEG1Q9ULI3 1381 aa37.31■■■■□ 3.56
PDCD2-201ENST00000167218 KCNQ3O43525 872 aa37.31■■■■□ 3.56
PDCD2-201ENST00000167218 DCTN1Q14203 1278 aa37.31■■■■□ 3.56
PDCD2-201ENST00000167218 SRP68Q9UHB9 627 aaKnown RBP37.31■■■■□ 3.56
PDCD2-201ENST00000167218 ZBTB1Q9Y2K1 713 aa37.31■■■■□ 3.56
PDCD2-201ENST00000167218 MYBBP1AQ9BQG0 1328 aaKnown RBP37.31■■■■□ 3.56
PDCD2-201ENST00000167218 USP42Q9H9J4 1324 aaKnown RBP37.31■■■■□ 3.56
PDCD2-201ENST00000167218 BTBD11A6QL63 1104 aa37.3■■■■□ 3.56
PDCD2-201ENST00000167218 YY1P25490 414 aa37.3■■■■□ 3.56
PDCD2-201ENST00000167218 GPR162Q16538 588 aa37.3■■■■□ 3.56
PDCD2-201ENST00000167218 CHD4Q14839 1912 aa37.28■■■■□ 3.56
PDCD2-201ENST00000167218 FMNL2Q96PY5 1086 aa37.26■■■■□ 3.56
PDCD2-201ENST00000167218 KIF13BQ9NQT8 1826 aa37.25■■■■□ 3.55
PDCD2-201ENST00000167218 NEFMP07197 916 aa37.25■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms