RNA–Protein interactions for RNA: ENST00000002829.7

SEMA3F-201, Transcript of semaphorin 3F, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-201ENST00000002829 ABCC1P33527 1531 aa16.38■□□□□ 0.21
SEMA3F-201ENST00000002829 ATP5J2-PTCD1G3V325 749 aa16.38■□□□□ 0.21
SEMA3F-201ENST00000002829 DCTPP1Q9H773 170 aa16.38■□□□□ 0.21
SEMA3F-201ENST00000002829 METP08581 1390 aa16.38■□□□□ 0.21
SEMA3F-201ENST00000002829 KCNA6P17658 529 aa16.37■□□□□ 0.21
SEMA3F-201ENST00000002829 CASTP20810 708 aaKnown RBP16.37■□□□□ 0.21
SEMA3F-201ENST00000002829 TOMM22Q9NS69 142 aa16.37■□□□□ 0.21
SEMA3F-201ENST00000002829 NEXNQ0ZGT2 675 aa16.37■□□□□ 0.21
SEMA3F-201ENST00000002829 CHMP4CQ96CF2 233 aa16.37■□□□□ 0.21
SEMA3F-201ENST00000002829 DDX11Q96FC9 970 aa16.37■□□□□ 0.21
SEMA3F-201ENST00000002829 ZKSCAN1P17029 563 aaPredicted RBP16.37■□□□□ 0.21
SEMA3F-201ENST00000002829 NECAB1Q8N987 351 aa16.37■□□□□ 0.21
SEMA3F-201ENST00000002829 CAMK4Q16566 473 aa16.36■□□□□ 0.21
SEMA3F-201ENST00000002829 DDX17Q92841 729 aaKnown RBP16.36■□□□□ 0.21
SEMA3F-201ENST00000002829 TMX3Q96JJ7 454 aa16.36■□□□□ 0.21
SEMA3F-201ENST00000002829 STRN4Q9NRL3 753 aa16.36■□□□□ 0.21
SEMA3F-201ENST00000002829 KAT6BQ8WYB5 2073 aa16.36■□□□□ 0.21
SEMA3F-201ENST00000002829 PROSER2Q86WR7 435 aaPredicted RBP16.36■□□□□ 0.21
SEMA3F-201ENST00000002829 POGZQ7Z3K3 1410 aa16.36■□□□□ 0.21
SEMA3F-201ENST00000002829 H3BQV1 296 aa16.35■□□□□ 0.21
SEMA3F-201ENST00000002829 IFFO2Q5TF58 517 aa16.35■□□□□ 0.21
SEMA3F-201ENST00000002829 SYAP1Q96A49 352 aaPredicted RBP16.35■□□□□ 0.21
SEMA3F-201ENST00000002829 CNTROBQ8N137 903 aa16.35■□□□□ 0.21
SEMA3F-201ENST00000002829 BICD2Q8TD16 824 aa16.34■□□□□ 0.21
SEMA3F-201ENST00000002829 RBSNQ9H1K0 784 aa16.34■□□□□ 0.21
SEMA3F-201ENST00000002829 THEMISQ8N1K5 641 aaPredicted RBP16.34■□□□□ 0.21
SEMA3F-201ENST00000002829 LRRC2Q9BYS8 371 aa16.34■□□□□ 0.21
SEMA3F-201ENST00000002829 USP25Q9UHP3 1055 aa16.34■□□□□ 0.21
SEMA3F-201ENST00000002829 PRR36Q9H6K5 1346 aa16.34■□□□□ 0.21
SEMA3F-201ENST00000002829 TPM2P07951 284 aa16.34■□□□□ 0.21
SEMA3F-201ENST00000002829 ZSCAN23Q3MJ62 389 aa16.34■□□□□ 0.21
SEMA3F-201ENST00000002829 RAB11FIP4Q86YS3 637 aa16.34■□□□□ 0.21
SEMA3F-201ENST00000002829 TFIP11Q9UBB9 837 aaKnown RBP16.34■□□□□ 0.21
SEMA3F-201ENST00000002829 USP26Q9BXU7 913 aa16.33■□□□□ 0.21
SEMA3F-201ENST00000002829 ZCCHC11Q5TAX3 1644 aaKnown RBP16.33■□□□□ 0.21
SEMA3F-201ENST00000002829 NBPF7P0C2Y1 421 aaPredicted RBP16.33■□□□□ 0.2
SEMA3F-201ENST00000002829 TTC12Q9H892 705 aaPredicted RBP16.33■□□□□ 0.2
SEMA3F-201ENST00000002829 PALD1Q9ULE6 856 aa16.33■□□□□ 0.2
SEMA3F-201ENST00000002829 TRPM2O94759 1503 aa16.33■□□□□ 0.2
SEMA3F-201ENST00000002829 FAM184AQ8NB25 1140 aa16.33■□□□□ 0.2
SEMA3F-201ENST00000002829 PHF8Q9UPP1 1060 aa16.33■□□□□ 0.2
SEMA3F-201ENST00000002829 CHAF1AQ13111 956 aaPredicted RBP16.32■□□□□ 0.2
SEMA3F-201ENST00000002829 FAM173BQ6P4H8 233 aa16.32■□□□□ 0.2
SEMA3F-201ENST00000002829 MAP3K2Q9Y2U5 619 aa16.32■□□□□ 0.2
SEMA3F-201ENST00000002829 TULP1O00294 542 aaPredicted RBP16.32■□□□□ 0.2
SEMA3F-201ENST00000002829 UNC5CLQ8IV45 518 aa16.32■□□□□ 0.2
SEMA3F-201ENST00000002829 ARHGAP45Q92619 1136 aa16.31■□□□□ 0.2
SEMA3F-201ENST00000002829 KDM5AP29375 1690 aaKnown RBP16.31■□□□□ 0.2
SEMA3F-201ENST00000002829 ZFYVE16Q7Z3T8 1539 aa16.31■□□□□ 0.2
SEMA3F-201ENST00000002829 GUCY1B3Q02153 619 aa16.31■□□□□ 0.2
SEMA3F-201ENST00000002829 PLEKHO1Q53GL0 409 aaPredicted RBP16.31■□□□□ 0.2
SEMA3F-201ENST00000002829 CROCC2H7BZ55 1655 aa16.31■□□□□ 0.2
SEMA3F-201ENST00000002829 DNAAF4Q8WXU2 420 aa16.31■□□□□ 0.2
SEMA3F-201ENST00000002829 ZMYM3Q14202 1370 aa16.3■□□□□ 0.2
SEMA3F-201ENST00000002829 APPP05067 770 aa16.3■□□□□ 0.2
SEMA3F-201ENST00000002829 FMNL2Q96PY5 1086 aa16.3■□□□□ 0.2
SEMA3F-201ENST00000002829 PDCL3Q9H2J4 239 aa16.3■□□□□ 0.2
SEMA3F-201ENST00000002829 CHL1O00533 1208 aa16.3■□□□□ 0.2
SEMA3F-201ENST00000002829 PTMSP20962 102 aa16.3■□□□□ 0.2
SEMA3F-201ENST00000002829 GNL2Q13823 731 aaKnown RBP16.3■□□□□ 0.2
SEMA3F-201ENST00000002829 RAB3GAP1Q15042 981 aa16.3■□□□□ 0.2
SEMA3F-201ENST00000002829 RHPN1Q8TCX5 695 aa16.29■□□□□ 0.2
SEMA3F-201ENST00000002829 RUFY2Q8WXA3 655 aa16.29■□□□□ 0.2
SEMA3F-201ENST00000002829 MYD88Q99836 296 aa16.29■□□□□ 0.2
SEMA3F-201ENST00000002829 CIZ1Q9ULV3 898 aaPredicted RBP16.29■□□□□ 0.2
SEMA3F-201ENST00000002829 WASHC4Q2M389 1173 aa16.29■□□□□ 0.2
SEMA3F-201ENST00000002829 TRERF1Q96PN7 1200 aa16.29■□□□□ 0.2
SEMA3F-201ENST00000002829 PRAMEF22A3QJZ6 481 aa16.29■□□□□ 0.2
SEMA3F-201ENST00000002829 ZNF771Q7L3S4 317 aaPredicted RBP16.29■□□□□ 0.2
SEMA3F-201ENST00000002829 ORAI2Q96SN7 254 aa16.29■□□□□ 0.2
SEMA3F-201ENST00000002829 PHF23Q9BUL5 403 aaPredicted RBP16.29■□□□□ 0.2
SEMA3F-201ENST00000002829 FSD2A1L4K1 749 aa16.28■□□□□ 0.2
SEMA3F-201ENST00000002829 RBM25P49756 843 aaKnown RBP16.28■□□□□ 0.2
SEMA3F-201ENST00000002829 CREBRFQ8IUR6 639 aa16.28■□□□□ 0.2
SEMA3F-201ENST00000002829 EDC3Q96F86 508 aaKnown RBP16.28■□□□□ 0.2
SEMA3F-201ENST00000002829 ESYT1Q9BSJ8 1104 aa16.28■□□□□ 0.2
SEMA3F-201ENST00000002829 DDX58O95786 925 aaKnown RBP16.28■□□□□ 0.2
SEMA3F-201ENST00000002829 E9PCH4 1651 aa16.28■□□□□ 0.2
SEMA3F-201ENST00000002829 CKAP2LQ8IYA6 745 aa16.28■□□□□ 0.2
SEMA3F-201ENST00000002829 SNRKQ9NRH2 765 aa16.28■□□□□ 0.2
SEMA3F-201ENST00000002829 IL17REQ8NFR9 667 aa16.27■□□□□ 0.2
SEMA3F-201ENST00000002829 EVA1CP58658 441 aa16.27■□□□□ 0.2
SEMA3F-201ENST00000002829 LARP1BQ659C4 914 aaKnown RBP16.27■□□□□ 0.2
SEMA3F-201ENST00000002829 CNPY2Q9Y2B0 182 aa16.27■□□□□ 0.2
SEMA3F-201ENST00000002829 SF3A1Q15459 793 aaKnown RBP16.27■□□□□ 0.19
SEMA3F-201ENST00000002829 IQGAP3Q86VI3 1631 aa16.27■□□□□ 0.19
SEMA3F-201ENST00000002829 ATP2B1P20020 1258 aa16.26■□□□□ 0.19
SEMA3F-201ENST00000002829 FKBP4Q02790 459 aaKnown RBP eCLIP16.26■□□□□ 0.19
SEMA3F-201ENST00000002829 PDRG1Q9NUG6 133 aa16.26■□□□□ 0.19
SEMA3F-201ENST00000002829 UHRF1BP1LA0JNW5 1464 aa16.26■□□□□ 0.19
SEMA3F-201ENST00000002829 TNRQ92752 1358 aa16.26■□□□□ 0.19
SEMA3F-201ENST00000002829 GIMAP6Q6P9H5 292 aa16.26■□□□□ 0.19
SEMA3F-201ENST00000002829 KIF1BPQ96EK5 621 aa16.26■□□□□ 0.19
SEMA3F-201ENST00000002829 TSPY26PQ9H489 355 aa16.26■□□□□ 0.19
SEMA3F-201ENST00000002829 SBNO2Q9Y2G9 1366 aa16.25■□□□□ 0.19
SEMA3F-201ENST00000002829 HCLS1P14317 486 aaPredicted RBP16.25■□□□□ 0.19
SEMA3F-201ENST00000002829 NBPF6Q5VWK0 638 aa16.25■□□□□ 0.19
SEMA3F-201ENST00000002829 UBE3BQ7Z3V4 1068 aa16.25■□□□□ 0.19
SEMA3F-201ENST00000002829 NBPF4Q96M43 638 aa16.25■□□□□ 0.19
SEMA3F-201ENST00000002829 ZBTB3Q9H5J0 574 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms