RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Rpa1Q8VEE4 623 aaKnown RBP8.28□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Sart1Q9Z315 806 aaKnown RBP8.28□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Cdc42bpgQ80UW5 1551 aa8.28□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Bcl9Q9D219 1425 aa8.28□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Ipcef1Q5DU31 406 aa8.27□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Scube3Q66PY1 993 aa8.27□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Caskin1Q6P9K8 1431 aa8.27□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Slc10a4Q3UEZ8 437 aa8.27□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Sh3d21Q7TSG5 549 aa8.27□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 4930504O13RikQ8C5Z9 145 aa8.27□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Caskin2Q8VHK1 1201 aa8.27□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Ltbp4Q8K4G1 1666 aa8.27□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Ap1g2O88512 791 aa8.26□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 PtmaP26350 111 aa8.26□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Ier5lQ99J55 406 aa8.26□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 CalcaP70160 136 aa8.26□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Bmt2Q8BXK4 403 aa8.26□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Zfp617Q91WM0 559 aa8.26□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Hao2Q9NYQ2 353 aa8.26□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Trpm1Q2TV84 1622 aa8.25□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 PurbO35295 324 aaKnown RBP8.25□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Spink5Q148R4 1017 aa8.25□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Thap11Q9JJD0 305 aa8.25□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Zfp362B1ASA5 418 aa8.25□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Magea1O89006 320 aa8.25□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Phf12Q5SPL2 1003 aa8.25□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Q6PAC4 1279 aa8.25□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Clstn1Q9EPL2 979 aa8.25□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Gemin5Q8BX17 1502 aaKnown RBP8.24□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Slc30a10Q3UVU3 470 aa8.24□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Zbtb4Q5F293 982 aa8.24□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Tpp2Q64514 1262 aa8.24□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Stac3Q8BZ71 360 aa8.24□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Sh3bp5Q9Z131 463 aa8.24□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Gli2Q0VGT2 1544 aa8.24□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Arhgap4B1AUY3 965 aa8.23□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 P4hbP09103 509 aaKnown RBP8.23□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Hspa1lP16627 641 aa8.23□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 LmnaP48678 665 aaKnown RBP8.23□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Crtc2Q3U182 692 aa8.23□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Ubp1Q811S7 540 aa8.23□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Emid1Q91VF5 444 aa8.23□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 FanciQ8K368 1330 aa8.23□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Fhod3Q76LL6 1578 aa8.23□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Il13ra1O09030 424 aa8.23□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Pcdhb7Q8CDY9 829 aa8.23□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Cd2apQ9JLQ0 637 aa8.23□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Sept3Q9Z1S5 350 aa8.23□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Map3k5O35099 1380 aa8.23□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 UacaQ8CGB3 1411 aa8.22□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 GphnQ8BUV3 769 aaKnown RBP8.22□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 PtmsQ9D0J8 101 aaKnown RBP8.22□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Knl1Q66JQ7 1612 aa8.22□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Ankrd36D3Z4K0 1415 aa8.22□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Naip6Q9JIB6 1403 aa8.22□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Speer4f2E9Q366 295 aa8.22□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 MpstQ99J99 297 aa8.22□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Nos1Q9Z0J4 1429 aa8.21□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Hspa5P20029 655 aaKnown RBP8.21□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Nrsn1P97799 196 aa8.21□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Zcwpw1Q6IR42 630 aa8.21□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Adnp2Q8CHC8 1165 aaKnown RBP8.21□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Eva1bQ8K2Y3 164 aa8.21□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 OptnQ8K3K8 584 aa8.21□□□□□ -1.09
Ccdc38-203ENSMUST00000132214 Adcy10Q8C0T9 1614 aa8.21□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Pdcd11Q6NS46 1862 aaKnown RBP8.21□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 DgkiD3YWQ0 1071 aa8.21□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 ZfrO88532 1074 aaKnown RBP8.21□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Hps4Q99KG7 671 aa8.21□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 CltcQ68FD5 1675 aaKnown RBP8.2□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Prpf38bQ80SY5 542 aaKnown RBP8.2□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Ccdc38Q8CDN8 563 aa8.2□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Adgrf1Q8VEC3 908 aa8.2□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Cabp1Q9JLK7 227 aa8.2□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Plekhh2Q8C115 1491 aa8.2□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Gm11939A2A592 99 aa8.19□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 PtprnQ60673 979 aa8.19□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 PogkQ80TC5 607 aa8.19□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Gm17324Q8C6J8 137 aa8.19□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 EspnQ9ET47 871 aa8.19□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Abcc5Q9R1X5 1436 aa8.19□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Apex1P28352 317 aaKnown RBP8.19□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 PtpreP49446 699 aa8.19□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 HomezQ80W88 542 aa8.19□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Kif7B7ZNG0 1348 aa8.19□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Rimbp3Q3V0F0 1606 aa8.19□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Phlpp1Q8CHE4 1687 aa8.19□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Hmgb1P63158 215 aaKnown RBP8.18□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Gli3Q61602 1583 aa8.18□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 RictorQ6QI06 1708 aa8.18□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Cdc42bpbQ7TT50 1713 aa8.18□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Znf518aB2RRF6 1478 aaKnown RBP8.18□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Mtus2Q3UHD3 1353 aa8.18□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Ankrd34aB2RW11 495 aa8.18□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Mxra7Q9CZH7 178 aa8.18□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Nol7Q9D7Z3 254 aaKnown RBP8.18□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Dbn1Q9QXS6 706 aa8.18□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 AlkP97793 1621 aa8.17□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Med14A2ABV5 1459 aaKnown RBP8.17□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Map7d1A2AJI0 846 aa8.17□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms