RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Ccdc12Q8R344 166 aaKnown RBP11.93□□□□□ -0.5
Lig4-201ENSMUST00000095476 CenppQ9CZ92 286 aa11.93□□□□□ -0.5
Lig4-201ENSMUST00000095476 Ccdc121E9Q6D3 323 aa11.93□□□□□ -0.5
Lig4-201ENSMUST00000095476 Gas2l3Q3UWW6 683 aa11.93□□□□□ -0.5
Lig4-201ENSMUST00000095476 Kdm4cQ8VCD7 1054 aa11.93□□□□□ -0.5
Lig4-201ENSMUST00000095476 LifrP42703 1092 aa11.93□□□□□ -0.5
Lig4-201ENSMUST00000095476 Uspl1Q3ULM6 1089 aa11.93□□□□□ -0.5
Lig4-201ENSMUST00000095476 Q3UPC7 1272 aa11.93□□□□□ -0.5
Lig4-201ENSMUST00000095476 Jph4Q80WT0 628 aa11.93□□□□□ -0.5
Lig4-201ENSMUST00000095476 Ccdc158Q8CDI6 1109 aa11.93□□□□□ -0.5
Lig4-201ENSMUST00000095476 Ms4a1P19437 291 aa11.93□□□□□ -0.5
Lig4-201ENSMUST00000095476 Bms1Q6PGF5 1284 aaKnown RBP11.93□□□□□ -0.5
Lig4-201ENSMUST00000095476 Ccdc96Q9CR92 584 aa11.93□□□□□ -0.5
Lig4-201ENSMUST00000095476 Pnpla2Q8BJ56 486 aa11.92□□□□□ -0.5
Lig4-201ENSMUST00000095476 Acbd3Q8BMP6 525 aa11.92□□□□□ -0.5
Lig4-201ENSMUST00000095476 Elp1Q7TT37 1333 aaKnown RBP11.92□□□□□ -0.5
Lig4-201ENSMUST00000095476 Lamc3Q9R0B6 1581 aa11.92□□□□□ -0.5
Lig4-201ENSMUST00000095476 Irgm2A0A140LIF8 407 aa11.92□□□□□ -0.5
Lig4-201ENSMUST00000095476 Rsph10bE9PYQ0 876 aa11.92□□□□□ -0.5
Lig4-201ENSMUST00000095476 Tyro3P55144 880 aa11.92□□□□□ -0.5
Lig4-201ENSMUST00000095476 Ankrd44B2RXR6 993 aa11.92□□□□□ -0.5
Lig4-201ENSMUST00000095476 GmnnO88513 206 aa11.92□□□□□ -0.5
Lig4-201ENSMUST00000095476 4930548H24RikQ9D496 437 aa11.92□□□□□ -0.5
Lig4-201ENSMUST00000095476 Jade2Q6ZQF7 829 aa11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 Rufy2Q8R4C2 606 aa11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 Erbb3Q61526 1339 aa11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 Mroh2bQ7M6Y6 1581 aa11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 CrcpO35427 148 aa11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 Prkar2bP31324 416 aa11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 Ccdc114Q3UX62 658 aa11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 Tspyl3Q3UYP3 334 aa11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 Ano6Q6P9J9 911 aa11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 Brd3Q8K2F0 726 aaKnown RBP11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 Vps37cQ8R105 352 aa11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 Cabp2Q9JLK4 216 aa11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 Stim1P70302 685 aa11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 Txndc2Q6P902 515 aa11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 Ppp4r3bQ922R5 820 aa11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 Ccdc43Q9CR29 222 aaKnown RBP11.91□□□□□ -0.5
Lig4-201ENSMUST00000095476 Pik3c2gO70167 1506 aa11.9□□□□□ -0.5
Lig4-201ENSMUST00000095476 Rfx7F8VPJ6 1459 aa11.9□□□□□ -0.5
Lig4-201ENSMUST00000095476 Prdm16A2A935 1275 aa11.9□□□□□ -0.5
Lig4-201ENSMUST00000095476 Bcar3Q9QZK2 820 aa11.9□□□□□ -0.5
Lig4-201ENSMUST00000095476 Atf7ipQ7TT18 1306 aa11.9□□□□□ -0.5
Lig4-201ENSMUST00000095476 Cdca8Q8BHX3 289 aa11.9□□□□□ -0.5
Lig4-201ENSMUST00000095476 Brf1Q8CFK2 676 aa11.9□□□□□ -0.5
Lig4-201ENSMUST00000095476 Zkscan4Q5SZT6 480 aa11.9□□□□□ -0.5
Lig4-201ENSMUST00000095476 Rbm28Q8CGC6 750 aaKnown RBP11.9□□□□□ -0.5
Lig4-201ENSMUST00000095476 Zscan25B2RX31 543 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Gm7361D3Z6R1 267 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Mcm5P49718 733 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Cct4P80315 539 aaKnown RBP11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Ccp110Q7TSH4 1004 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Ddx27Q921N6 760 aaKnown RBP11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Mkrn1Q9QXP6 481 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Tubb4bP68372 445 aaKnown RBP11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Trak2Q6P9N8 913 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Dpf1Q9QX66 387 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 PalmQ9Z0P4 383 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Grin2bQ01097 1482 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Gm1979E9QAN3 267 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Frat1P70339 274 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Bach2P97303 839 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Pms1Q8K119 917 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Paip2Q9D6V8 124 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Gdpd2Q9ESM6 539 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Pdia3P27773 505 aaKnown RBP11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Gsdma3Q5Y4Y6 464 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Adck5Q80V03 582 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Tshz3Q8CGV9 1081 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Mtmr3Q8K296 1196 aa11.89□□□□□ -0.51
Lig4-201ENSMUST00000095476 Dnajc5P60904 198 aa11.88□□□□□ -0.51
Lig4-201ENSMUST00000095476 Hip1rQ9JKY5 1068 aa11.88□□□□□ -0.51
Lig4-201ENSMUST00000095476 Bloc1s2Q9CWG9 143 aa11.88□□□□□ -0.51
Lig4-201ENSMUST00000095476 DroshaQ5HZJ0 1373 aaKnown RBP11.88□□□□□ -0.51
Lig4-201ENSMUST00000095476 Camsap1A2AHC3 1581 aa11.88□□□□□ -0.51
Lig4-201ENSMUST00000095476 Limch1Q3UH68 1057 aa11.88□□□□□ -0.51
Lig4-201ENSMUST00000095476 Cdkl5Q3UTQ8 938 aa11.88□□□□□ -0.51
Lig4-201ENSMUST00000095476 Synpo2Q91YE8 1087 aaKnown RBP11.88□□□□□ -0.51
Lig4-201ENSMUST00000095476 Srgap1Q91Z69 1062 aa11.88□□□□□ -0.51
Lig4-201ENSMUST00000095476 Gm3409A0A0G2JE67 319 aa11.88□□□□□ -0.51
Lig4-201ENSMUST00000095476 PtprkP35822 1457 aa11.88□□□□□ -0.51
Lig4-201ENSMUST00000095476 MpndQ3TV65 487 aa11.87□□□□□ -0.51
Lig4-201ENSMUST00000095476 Kif21aQ9QXL2 1672 aa11.87□□□□□ -0.51
Lig4-201ENSMUST00000095476 Capn2O08529 700 aa11.87□□□□□ -0.51
Lig4-201ENSMUST00000095476 Bin1O08539 588 aaKnown RBP11.87□□□□□ -0.51
Lig4-201ENSMUST00000095476 Ercc3P49135 783 aa11.87□□□□□ -0.51
Lig4-201ENSMUST00000095476 Ppfibp1Q8C8U0 969 aaKnown RBP11.87□□□□□ -0.51
Lig4-201ENSMUST00000095476 Ppp1r42Q8R1Z4 357 aa11.87□□□□□ -0.51
Lig4-201ENSMUST00000095476 SarnpQ9D1J3 210 aaKnown RBP11.87□□□□□ -0.51
Lig4-201ENSMUST00000095476 Map2k1P31938 393 aa11.87□□□□□ -0.51
Lig4-201ENSMUST00000095476 Nucb1Q02819 459 aaKnown RBP11.87□□□□□ -0.51
Lig4-201ENSMUST00000095476 Gm45015A0A140LII9 184 aa11.87□□□□□ -0.51
Lig4-201ENSMUST00000095476 Tubb5P99024 444 aaKnown RBP11.87□□□□□ -0.51
Lig4-201ENSMUST00000095476 Nol8Q3UHX0 1147 aaKnown RBP11.87□□□□□ -0.51
Lig4-201ENSMUST00000095476 Trim27Q62158 513 aa11.87□□□□□ -0.51
Lig4-201ENSMUST00000095476 Ap3b2Q9JME5 1082 aa11.87□□□□□ -0.51
Lig4-201ENSMUST00000095476 Zfp597E9Q6S0 419 aa11.86□□□□□ -0.51
Lig4-201ENSMUST00000095476 Pcf11G3X9Z4 1553 aa11.86□□□□□ -0.51
Lig4-201ENSMUST00000095476 EappQ5BU09 281 aa11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms