RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Olfml1Q8BSH2 233 aa14.21□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Smc5Q8CG46 1101 aaKnown RBP14.21□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Abcd1P48410 736 aa14.21□□□□□ -0.13
Col8a1-201ENSMUST00000089332 ArsiQ32KI9 573 aa14.21□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Larp1Q6ZQ58 1072 aaKnown RBP14.21□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Ccdc178Q8CDV0 866 aa14.21□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Smarca5Q91ZW3 1051 aaKnown RBP14.21□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Iqca1Q9CUL5 857 aa14.21□□□□□ -0.13
Col8a1-201ENSMUST00000089332 Gimap5Q8BWF2 308 aa14.21□□□□□ -0.13
Col8a1-201ENSMUST00000089332 SfswapQ3USH5 945 aaKnown RBP14.21□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Pmfbp1Q9WVQ0 1022 aa14.2□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Rapgef6Q5NCJ1 1609 aa14.2□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Hoxb7P09024 217 aa14.2□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Erlin2Q8BFZ9 340 aa14.2□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Nup133Q8R0G9 1155 aa14.2□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Ipo4Q8VI75 1082 aa14.2□□□□□ -0.14
Col8a1-201ENSMUST00000089332 CenpqQ9CPQ5 267 aa14.2□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Irf9Q61179 399 aa14.2□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Tmem87bQ8BKU8 555 aa14.2□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Myd88P22366 296 aa14.2□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Q3UPC7 1272 aa14.2□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Mctp2Q5RJH2 878 aa14.2□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Slf2Q6P9P0 1278 aa14.2□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Mapkbp1Q6NS57 1503 aa14.19□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Ssh1Q76I79 1042 aa14.19□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Zranb1Q7M760 708 aa14.19□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Cep55Q8BT07 462 aa14.19□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Rai14Q9EP71 979 aaKnown RBP14.19□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Ccdc155Q80VJ8 648 aa14.19□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Ankle2Q6P1H6 964 aa14.19□□□□□ -0.14
Col8a1-201ENSMUST00000089332 RalgapbQ8BQZ4 1484 aa14.19□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Spg7Q3ULF4 781 aa14.19□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Fez1Q8K0X8 392 aa14.19□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Nsfl1cQ9CZ44 370 aaKnown RBP14.19□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Mcm10Q0VBD2 885 aa14.18□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Rnf41Q8BH75 317 aa14.18□□□□□ -0.14
Col8a1-201ENSMUST00000089332 TxlnbQ8VBT1 685 aa14.18□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Trappc8E9PWG2 1437 aa14.18□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Fam184aE9PW83 1143 aa14.18□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Ppm1eQ80TL0 749 aa14.18□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Gnat3Q3V3I2 354 aa14.18□□□□□ -0.14
Col8a1-201ENSMUST00000089332 VeztQ3ZK22 780 aa14.18□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Gjb2Q00977 226 aa14.17□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Erich4Q3UNU4 136 aa14.17□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Frmpd2A0A140LI67 1392 aa14.17□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Polr3dQ91WD1 398 aa14.17□□□□□ -0.14
Col8a1-201ENSMUST00000089332 InsrP15208 1372 aa14.17□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Trim11Q99PQ2 467 aa14.17□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Nap1l2P51860 460 aa14.16□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Ifit1bl2Q3U687 466 aa14.16□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Tmem67Q8BR76 992 aa14.16□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Nol7Q9D7Z3 254 aaKnown RBP14.16□□□□□ -0.14
Col8a1-201ENSMUST00000089332 PxdnQ3UQ28 1475 aa14.16□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Chpf2Q3UU43 768 aa14.16□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Pik3r4Q8VD65 1358 aa14.16□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Aplp1Q03157 653 aa14.16□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Lamb3Q61087 1168 aa14.15□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Lrrfip2Q91WK0 415 aa14.15□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Cavin1O54724 392 aa14.15□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Pof1bQ8K4L4 587 aa14.15□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Disp1Q3TDN0 1521 aa14.15□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Dzip1Q8BMD2 852 aa14.15□□□□□ -0.14
Col8a1-201ENSMUST00000089332 Kdm3aQ6PCM1 1323 aa14.14□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Tom1O88746 492 aa14.14□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Ltv1Q6NSQ7 470 aaKnown RBP14.14□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Ces1hD3Z298 562 aa14.14□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Cwc25Q9DBF7 416 aa14.14□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Ythdc2B2RR83 1445 aaKnown RBP14.14□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Uspl1Q3ULM6 1089 aa14.14□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Ddx19aQ61655 478 aaKnown RBP14.14□□□□□ -0.15
Col8a1-201ENSMUST00000089332 ZwintQ9CQU5 252 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Echdc1Q9D9V3 322 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Olr1Q9EQ09 363 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 PaskQ8CEE6 1383 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Camsap2Q8C1B1 1461 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Samd9lQ69Z37 1561 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Izumo3A6PWV3 263 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Traf3ip1Q149C2 625 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Gas2l3Q3UWW6 683 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Igf2bp2Q5SF07 592 aaKnown RBP14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Brms1Q99N20 246 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Phf14Q9D4H9 881 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Cwc15Q9JHS9 229 aaKnown RBP14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Tmem94Q7TSH8 1360 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Speer4dL7N216 212 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Map3k2Q61083 619 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Samm50Q8BGH2 469 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Dnaaf4Q8R368 420 aa14.13□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Kdm5bQ80Y84 1544 aa14.12□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Kank1E9Q238 1360 aa14.12□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Pafah1b1P63005 410 aaKnown RBP14.12□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Rbm26Q6NZN0 1012 aaKnown RBP14.12□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Rrp9Q91WM3 475 aaKnown RBP14.12□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Mipol1Q9D9F8 279 aa14.12□□□□□ -0.15
Col8a1-201ENSMUST00000089332 CenphQ9QYM8 241 aa14.12□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Wdr33Q8K4P0 1330 aaKnown RBP14.12□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Rad23bP54728 416 aa14.12□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Gm156Q58A37 223 aa14.12□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Cdan1Q8CC12 1239 aa14.12□□□□□ -0.15
Col8a1-201ENSMUST00000089332 Plekho1Q9JIY0 408 aa14.12□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms