RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Tmx1Q8VBT0 278 aa11.54□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Tlcd1Q99JT6 247 aa11.54□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ccdc83Q9D4V3 305 aa11.54□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Rnf123Q5XPI3 1314 aa11.54□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Fam135aQ6NS59 1506 aa11.54□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Kdm5aQ3UXZ9 1690 aa11.54□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ksr2Q3UVC0 959 aa11.54□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Slc5a4aQ9ET37 656 aa11.54□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 DonsonQ9QXP4 560 aa11.54□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Naip7Q9JIB3 1402 aa11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Plb1Q3TTY0 1478 aa11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Cgnl1Q6AW69 1298 aa11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Filip1lQ6P6L0 1131 aa11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Kif7B7ZNG0 1348 aa11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ccdc171E9Q1U1 1324 aa11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 CenpjQ569L8 1344 aa11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Rsph10bE9PYQ0 876 aa11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Mcm5P49718 733 aa11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Atp6v1dP57746 247 aa11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Nucb1Q02819 459 aaKnown RBP11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ppp1r1bQ60829 194 aa11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Znf532Q6NXK2 1036 aa11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Trak2Q6P9N8 913 aa11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Maco1Q7TQE6 664 aaKnown RBP11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 SarnpQ9D1J3 210 aaKnown RBP11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Cdc42bpaQ3UU96 1719 aa11.53□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Zfyve16Q80U44 1528 aa11.52□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Kcnd1Q03719 651 aa11.52□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Wdr93Q402B2 695 aa11.52□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Fhod1Q6P9Q4 1197 aa11.52□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Nol11Q8BJW5 723 aaKnown RBP11.52□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ccdc178Q8CDV0 866 aa11.52□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Tomm22Q9CPQ3 142 aa11.52□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Skint5A7XUY5 1461 aa11.52□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Duox2A2AQ99 1517 aa11.52□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Adgrl3Q80TS3 1537 aa11.52□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Stk26Q99JT2 416 aa11.52□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Adcy10Q8C0T9 1614 aa11.52□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Pcmtd1P59913 357 aa11.51□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 GclcP97494 637 aa11.51□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Cep63Q3UPP8 700 aa11.51□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Samm50Q8BGH2 469 aa11.51□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Wdr60Q8C761 999 aa11.51□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Gtf2e1Q9D0D5 440 aa11.51□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 PdcQ9QW08 244 aa11.51□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Klhl33G3UW92 533 aa11.51□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Frat1P70339 274 aa11.51□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Skap1Q3UUV5 355 aa11.51□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Fancd2Q80V62 1450 aa11.51□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Coro7Q9D2V7 922 aa11.51□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Spag9Q58A65 1321 aaKnown RBP11.5□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Snx13Q6PHS6 957 aa11.5□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Dnaaf4Q8R368 420 aa11.5□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Ppp2r3dQ9Z176 491 aa11.5□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Efcab8Q8C9R9 203 aa11.5□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Nrbp1Q99J45 535 aa11.5□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Pmfbp1Q9WVQ0 1022 aa11.5□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Itsn2Q9Z0R6 1659 aa11.5□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Ccdc114Q3UX62 658 aa11.5□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Fbxw10Q5SUS0 1030 aa11.5□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Dact1Q8R4A3 778 aa11.5□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Q4VA45 678 aa11.49□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Ano6Q6P9J9 911 aa11.49□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Ube2oQ6ZPJ3 1288 aa11.49□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Bsdc1Q80Y55 427 aa11.49□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Brms1Q99N20 246 aa11.49□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Smc1aQ9CU62 1233 aaKnown RBP11.49□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 CarsQ9ER72 831 aaKnown RBP11.49□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Nup155Q99P88 1391 aaKnown RBP11.49□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Mcm3P25206 812 aaKnown RBP11.49□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Fam107bQ3TGF2 131 aa11.49□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Sgsm2Q80U12 1005 aa11.49□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Wdr3Q8BHB4 942 aaKnown RBP11.49□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Trerf1Q8BXJ2 1205 aa11.49□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Lonp2Q9DBN5 852 aa11.49□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Abcc2Q8VI47 1543 aa11.49□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 NinlQ6ZQ12 1394 aa11.48□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Zkscan16A2ALW2 728 aa11.48□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Traf1P39428 409 aa11.48□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Spout1Q3UHX9 385 aaKnown RBP11.48□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Mns1Q61884 491 aa11.48□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Elf2Q9JHC9 593 aa11.48□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 PtprgQ05909 1442 aa11.48□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Hsp90b1P08113 802 aaKnown RBP11.48□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Znf653Q6YND2 615 aa11.48□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Lrrc8aQ80WG5 810 aa11.48□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Aldh8a1Q8BH00 487 aa11.48□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Pdia3P27773 505 aaKnown RBP11.47□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Kcnb1Q03717 857 aa11.47□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Cpa2Q504N0 417 aa11.47□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Ddx46Q569Z5 1032 aaKnown RBP11.47□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Synpo2Q91YE8 1087 aaKnown RBP11.47□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Spata31d1bE9QA57 1361 aa11.47□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Zmym1Q3TJB1 983 aa11.47□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Ttll12Q3UDE2 639 aa11.47□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Cfap69Q8BH53 942 aa11.47□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Calcoco1Q8CGU1 691 aa11.47□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Cep89Q9CZX2 791 aa11.47□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Myom1Q62234 1667 aaKnown RBP11.46□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Zpr1Q62384 459 aa11.46□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms