RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Sirt1Q923E4 737 aa26.85■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Fbf1A2A870 1173 aa26.85■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Kcnj4P52189 445 aa26.85■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Map3k5O35099 1380 aa26.85■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Knop1Q9Z2Q2 478 aaKnown RBP26.85■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Gm21680A0A0G2JGR8 267 aa26.84■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Tbc1d9Q3UYK3 1264 aa26.84■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Polr3aB2RXC6 1390 aa26.84■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Cfap157Q0VFX2 523 aa26.84■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Ssr1Q9CY50 286 aaKnown RBP26.84■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Rfx7F8VPJ6 1459 aa26.84■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Mybbp1aQ7TPV4 1344 aaKnown RBP26.83■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Cep55Q8BT07 462 aa26.83■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Mtmr3Q8K296 1196 aa26.83■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Als2cr12Q8BVM7 383 aa26.83■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Tubb4bP68372 445 aaKnown RBP26.83■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Ccdc141E9Q8Q6 1531 aa26.83■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Pik3r4Q8VD65 1358 aa26.82■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Akap2O54931 893 aa26.82■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Dync1i1O88485 628 aa26.82■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Plekhm2Q80TQ5 1018 aa26.82■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Ccdc94Q9D6J3 314 aa26.82■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Atf3Q60765 181 aa26.81■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Ggnbp2Q5SV77 696 aa26.81■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 TkfcQ8VC30 578 aa26.81■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Znf704Q9ERQ3 566 aa26.81■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 TmpoQ61033 693 aaKnown RBP26.81■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Ampd3O08739 766 aa26.81■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Smarcc1P97496 1104 aa26.81■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 LlphQ9D945 130 aaKnown RBP26.81■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Ppp1r42Q8R1Z4 357 aa26.8■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Ccdc112A0AUP1 442 aa26.8■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Rad23bP54728 416 aa26.8■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Wdr63B2RY71 923 aa26.8■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Tex2Q6ZPJ0 1128 aaKnown RBP26.8■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Brd3Q8K2F0 726 aaKnown RBP26.8■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Themis2Q91YX0 663 aa26.8■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 StambpQ9CQ26 424 aa26.79■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Duox2A2AQ99 1517 aa26.79■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Usp25P57080 1055 aa26.79■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Prkar2bP31324 416 aa26.79■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Lrrfip2Q91WK0 415 aa26.79■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Dnajc2P54103 621 aaKnown RBP26.79■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Bloc1s2Q9CWG9 143 aa26.79■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Slc26a8Q8R0C3 999 aa26.79■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Smarca5Q91ZW3 1051 aaKnown RBP26.78■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Zeb2Q9R0G7 1215 aa26.78■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Ctage5Q8R311 779 aa26.78■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Btbd11Q6GQW0 1109 aa26.78■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Spata24Q6P926 205 aa26.78■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Pde1cQ64338 706 aa26.78■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Skor1Q8BX46 964 aa26.78■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Zmym4A2A791 1549 aaKnown RBP26.78■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Hmg20bQ9Z104 317 aa26.77■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 NmiO35309 314 aa26.77■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 EvcP57680 1005 aa26.77■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Grin2bQ01097 1482 aa26.77■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Erich4Q3UNU4 136 aa26.77■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 LyarQ08288 388 aaKnown RBP26.76■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Rnf34Q99KR6 376 aa26.76■■□□□ 1.88
Sh3rf1-201ENSMUST00000034060 Serpinb6bO08804 377 aa26.76■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Znf131Q8K3J5 619 aa26.76■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Calml4Q91WQ9 153 aa26.76■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Arhgef18Q6P9R4 1021 aa26.75■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 IkQ9Z1M8 557 aaKnown RBP26.75■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Tax1bp1Q3UKC1 814 aaKnown RBP26.74■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Txndc16Q7TN22 820 aa26.74■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Ano10Q8BH79 659 aa26.74■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Bag3Q9JLV1 577 aaKnown RBP26.74■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Fam107bQ3TGF2 131 aa26.74■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Ccdc66Q6NS45 935 aa26.74■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Mrpl44Q9CY73 333 aaKnown RBP26.74■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 4930572O03RikQ8C5Y0 211 aa26.74■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Ttc19Q8CC21 365 aa26.74■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Znf287Q9EQB9 759 aa26.74■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Camsap2Q8C1B1 1461 aa26.73■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Vps18Q8R307 973 aa26.73■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Map3k13Q1HKZ5 959 aa26.73■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Liat1Q810M6 228 aa26.73■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Zbtb22Q9Z0G7 638 aa26.73■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Ankib1Q6ZPS6 1085 aa26.72■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Atf7Q8R0S1 413 aa26.72■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Ccdc12Q8R344 166 aaKnown RBP26.72■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 AqrQ8CFQ3 1481 aaKnown RBP26.72■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 KdrP35918 1367 aa26.72■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Gng11P61953 73 aa26.72■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Mrps27Q8BK72 415 aaKnown RBP26.72■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Srgap1Q91Z69 1062 aa26.72■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Cfap73J3QPZ5 306 aa26.72■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 GmnnO88513 206 aa26.72■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Rbm27Q5SFM8 1060 aaKnown RBP26.71■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Fkbp5Q64378 456 aa26.71■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Shtn1Q8K2Q9 631 aa26.71■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 PaskQ8CEE6 1383 aa26.71■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Ankrd44B2RXR6 993 aa26.71■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Gm10093D3YYI8 482 aa26.7■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Hdac1O09106 482 aaKnown RBP26.7■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Mctp2Q5RJH2 878 aa26.7■■□□□ 1.87
Sh3rf1-201ENSMUST00000034060 Iffo1Q8BXL9 562 aa26.7■■□□□ 1.86
Sh3rf1-201ENSMUST00000034060 Ppfibp2O35711 882 aa26.7■■□□□ 1.86
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms