Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 AC020907.5-201ENST00000624372 1936 ntBASIC17.47■□□□□ 0.39
DKK4Q9UBT3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 AL137060.1-201ENST00000618151 2648 ntBASIC17.47■□□□□ 0.39
DKK4Q9UBT3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 AC132008.2-207ENST00000454517 770 ntBASIC17.47■□□□□ 0.39
DKK4Q9UBT3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 MIR3687-2-201ENST00000577708 61 ntBASIC17.47■□□□□ 0.39
DKK4Q9UBT3 MIR3687-1-201ENST00000614492 61 ntBASIC17.47■□□□□ 0.39
DKK4Q9UBT3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.47■□□□□ 0.39
DKK4Q9UBT3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 MED15P5-201ENST00000423150 992 ntBASIC17.46■□□□□ 0.39
DKK4Q9UBT3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 FGFR3P6-201ENST00000457012 610 ntBASIC17.46■□□□□ 0.39
DKK4Q9UBT3 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 AC010327.4-202ENST00000591484 748 ntBASIC17.46■□□□□ 0.39
DKK4Q9UBT3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 ZNF815P-204ENST00000434898 1737 ntBASIC17.46■□□□□ 0.39
DKK4Q9UBT3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DKK4Q9UBT3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
DKK4Q9UBT3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
DKK4Q9UBT3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
DKK4Q9UBT3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
DKK4Q9UBT3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 AL356488.2-201ENST00000602755 427 ntBASIC17.45■□□□□ 0.38
DKK4Q9UBT3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 AC073314.1-201ENST00000568729 2216 ntBASIC17.45■□□□□ 0.38
DKK4Q9UBT3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DKK4Q9UBT3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.44■□□□□ 0.38
DKK4Q9UBT3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DKK4Q9UBT3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DKK4Q9UBT3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.44■□□□□ 0.38
DKK4Q9UBT3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DKK4Q9UBT3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DKK4Q9UBT3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.44■□□□□ 0.38
DKK4Q9UBT3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DKK4Q9UBT3 YBX2P1-201ENST00000394192 760 ntBASIC17.44■□□□□ 0.38
DKK4Q9UBT3 HNRNPDP1-201ENST00000439535 754 ntBASIC17.44■□□□□ 0.38
DKK4Q9UBT3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.44■□□□□ 0.38
DKK4Q9UBT3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.44■□□□□ 0.38
DKK4Q9UBT3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.44■□□□□ 0.38
DKK4Q9UBT3 AC040169.1-201ENST00000565382 521 ntBASIC17.44■□□□□ 0.38
DKK4Q9UBT3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DKK4Q9UBT3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.44■□□□□ 0.38
DKK4Q9UBT3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.44■□□□□ 0.38
DKK4Q9UBT3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
DKK4Q9UBT3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms