Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.39■□□□□ 0.53
NPAS2Q99743 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS2Q99743 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS2Q99743 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.39■□□□□ 0.53
NPAS2Q99743 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.39■□□□□ 0.53
NPAS2Q99743 RPS2P55-201ENST00000397318 883 ntBASIC18.39■□□□□ 0.53
NPAS2Q99743 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NPAS2Q99743 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS2Q99743 SNORA78-201ENST00000459373 127 ntBASIC18.39■□□□□ 0.53
NPAS2Q99743 AC107956.1-201ENST00000494359 873 ntBASIC18.39■□□□□ 0.53
NPAS2Q99743 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.39■□□□□ 0.53
NPAS2Q99743 PRKY-204ENST00000533551 1019 ntBASIC18.39■□□□□ 0.53
NPAS2Q99743 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.39■□□□□ 0.53
NPAS2Q99743 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.39■□□□□ 0.53
NPAS2Q99743 MIR4497-201ENST00000583208 89 ntBASIC18.39■□□□□ 0.53
NPAS2Q99743 AC233702.5-201ENST00000584107 538 ntBASIC18.39■□□□□ 0.53
NPAS2Q99743 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.39■□□□□ 0.53
NPAS2Q99743 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
NPAS2Q99743 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS2Q99743 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
NPAS2Q99743 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS2Q99743 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS2Q99743 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NPAS2Q99743 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.39■□□□□ 0.53
NPAS2Q99743 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS2Q99743 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS2Q99743 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS2Q99743 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS2Q99743 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
NPAS2Q99743 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS2Q99743 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAS2Q99743 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS2Q99743 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.38■□□□□ 0.53
NPAS2Q99743 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS2Q99743 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAS2Q99743 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAS2Q99743 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAS2Q99743 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS2Q99743 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS2Q99743 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS2Q99743 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS2Q99743 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
NPAS2Q99743 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS2Q99743 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.38■□□□□ 0.53
NPAS2Q99743 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.38■□□□□ 0.53
NPAS2Q99743 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.38■□□□□ 0.53
NPAS2Q99743 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAS2Q99743 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS2Q99743 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NPAS2Q99743 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.38■□□□□ 0.53
NPAS2Q99743 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAS2Q99743 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.38■□□□□ 0.53
NPAS2Q99743 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS2Q99743 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS2Q99743 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS2Q99743 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.38■□□□□ 0.53
NPAS2Q99743 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS2Q99743 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS2Q99743 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS2Q99743 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS2Q99743 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS2Q99743 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NPAS2Q99743 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS2Q99743 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.37■□□□□ 0.53
NPAS2Q99743 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS2Q99743 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.37■□□□□ 0.53
NPAS2Q99743 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NPAS2Q99743 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS2Q99743 AC012618.2-201ENST00000428058 849 ntBASIC18.37■□□□□ 0.53
NPAS2Q99743 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS2Q99743 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NPAS2Q99743 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NPAS2Q99743 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS2Q99743 AL121906.2-201ENST00000621597 723 ntBASIC18.37■□□□□ 0.53
NPAS2Q99743 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS2Q99743 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.37■□□□□ 0.53
NPAS2Q99743 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS2Q99743 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS2Q99743 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS2Q99743 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NPAS2Q99743 ANO7L1-203ENST00000602586 1720 ntBASIC18.37■□□□□ 0.53
NPAS2Q99743 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS2Q99743 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS2Q99743 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS2Q99743 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.37■□□□□ 0.53
NPAS2Q99743 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NPAS2Q99743 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS2Q99743 AP000997.3-201ENST00000623333 2250 ntBASIC18.37■□□□□ 0.53
NPAS2Q99743 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS2Q99743 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS2Q99743 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS2Q99743 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS2Q99743 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
NPAS2Q99743 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.36■□□□□ 0.53
NPAS2Q99743 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS2Q99743 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS2Q99743 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS2Q99743 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS2Q99743 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NPAS2Q99743 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms