Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 KRT8P17-201ENST00000453110 1448 ntBASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 AC007274.1-201ENST00000439805 662 ntBASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 AP006288.1-201ENST00000446065 395 ntBASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 AC106028.4-201ENST00000614509 607 ntBASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 LINC01521-201ENST00000504184 1943 ntBASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNTNAP3BQ96NU0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 Z83836.1-201ENST00000624605 1642 ntBASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 AC018553.1-201ENST00000616682 1458 ntBASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 GK-202ENST00000378941 458 ntTSL 3 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CNTNAP3BQ96NU0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 AC092474.2-201ENST00000424288 719 ntBASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 AC005034.1-201ENST00000426657 489 ntBASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 AC245100.3-201ENST00000441281 285 ntBASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 AL035252.4-201ENST00000624174 288 ntBASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNTNAP3BQ96NU0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
CNTNAP3BQ96NU0 AF106564.1-201ENST00000607058 2553 ntBASIC17.89■□□□□ 0.46
CNTNAP3BQ96NU0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CNTNAP3BQ96NU0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CNTNAP3BQ96NU0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms