Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 IRX1P1-201ENST00000438849 1838 ntBASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 AL662844.1-201ENST00000546340 181 ntBASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 Z98044.1-201ENST00000632503 1764 ntBASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 RN7SL606P-201ENST00000472779 293 ntBASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 AC124864.1-201ENST00000623408 392 ntBASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 HEIH-201ENST00000623091 1652 ntBASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL27A1Q8IZC6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 FP475955.4-201ENST00000623131 1990 ntBASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 NUS1P2-201ENST00000417358 873 ntBASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 AC091304.2-201ENST00000564639 760 ntBASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 MIR3180-4-201ENST00000582223 153 ntBASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 AL357033.4-201ENST00000617703 1807 ntBASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 MIR564-202ENST00000385049 94 ntBASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 AC005332.3-201ENST00000589904 676 ntBASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL27A1Q8IZC6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.66■□□□□ 0.42
COL27A1Q8IZC6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
COL27A1Q8IZC6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms