Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALYREFQ86V81 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALYREFQ86V81 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ALYREFQ86V81 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALYREFQ86V81 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALYREFQ86V81 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALYREFQ86V81 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALYREFQ86V81 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALYREFQ86V81 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALYREFQ86V81 MIR564-202ENST00000385049 94 ntBASIC19.66■□□□□ 0.74
ALYREFQ86V81 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.66■□□□□ 0.74
ALYREFQ86V81 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ALYREFQ86V81 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ALYREFQ86V81 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.66■□□□□ 0.74
ALYREFQ86V81 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALYREFQ86V81 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALYREFQ86V81 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
ALYREFQ86V81 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.65■□□□□ 0.74
ALYREFQ86V81 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ALYREFQ86V81 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 MRPL3P1-201ENST00000400109 1033 ntBASIC19.65■□□□□ 0.74
ALYREFQ86V81 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
ALYREFQ86V81 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.65■□□□□ 0.74
ALYREFQ86V81 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.65■□□□□ 0.74
ALYREFQ86V81 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.65■□□□□ 0.74
ALYREFQ86V81 AL732292.2-201ENST00000609649 430 ntBASIC19.65■□□□□ 0.74
ALYREFQ86V81 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.65■□□□□ 0.74
ALYREFQ86V81 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.65■□□□□ 0.74
ALYREFQ86V81 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 BX119927.1-201ENST00000636596 1552 ntBASIC19.65■□□□□ 0.74
ALYREFQ86V81 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.65■□□□□ 0.74
ALYREFQ86V81 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALYREFQ86V81 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ALYREFQ86V81 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.64■□□□□ 0.74
ALYREFQ86V81 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.64■□□□□ 0.74
ALYREFQ86V81 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.64■□□□□ 0.74
ALYREFQ86V81 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ALYREFQ86V81 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ALYREFQ86V81 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALYREFQ86V81 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALYREFQ86V81 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALYREFQ86V81 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
ALYREFQ86V81 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALYREFQ86V81 NUS1P1-201ENST00000446295 882 ntBASIC19.64■□□□□ 0.73
ALYREFQ86V81 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.64■□□□□ 0.73
ALYREFQ86V81 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.64■□□□□ 0.73
ALYREFQ86V81 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.64■□□□□ 0.73
ALYREFQ86V81 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.64■□□□□ 0.73
ALYREFQ86V81 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALYREFQ86V81 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.64■□□□□ 0.73
ALYREFQ86V81 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.64■□□□□ 0.73
ALYREFQ86V81 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALYREFQ86V81 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALYREFQ86V81 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALYREFQ86V81 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALYREFQ86V81 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.64■□□□□ 0.73
ALYREFQ86V81 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALYREFQ86V81 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ALYREFQ86V81 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALYREFQ86V81 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALYREFQ86V81 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALYREFQ86V81 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALYREFQ86V81 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALYREFQ86V81 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.63■□□□□ 0.73
ALYREFQ86V81 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALYREFQ86V81 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.63■□□□□ 0.73
ALYREFQ86V81 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.63■□□□□ 0.73
ALYREFQ86V81 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ALYREFQ86V81 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.63■□□□□ 0.73
ALYREFQ86V81 LINC01311-201ENST00000565162 1445 ntBASIC19.63■□□□□ 0.73
ALYREFQ86V81 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALYREFQ86V81 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALYREFQ86V81 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.63■□□□□ 0.73
ALYREFQ86V81 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.63■□□□□ 0.73
ALYREFQ86V81 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.63■□□□□ 0.73
ALYREFQ86V81 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.63■□□□□ 0.73
ALYREFQ86V81 AL691403.2-201ENST00000618460 490 ntBASIC19.63■□□□□ 0.73
ALYREFQ86V81 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ALYREFQ86V81 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALYREFQ86V81 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
ALYREFQ86V81 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.63■□□□□ 0.73
ALYREFQ86V81 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALYREFQ86V81 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.63■□□□□ 0.73
ALYREFQ86V81 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms