Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 HLA-F-220ENST00000434407 884 ntBASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 AL157888.1-201ENST00000631930 593 ntBASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 MIR3917-201ENST00000580971 93 ntBASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 CLEC4GP1-201ENST00000596555 870 ntBASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC62Q6P9F0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 KRT8P32-201ENST00000512863 1461 ntBASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 IRX1P1-201ENST00000438849 1838 ntBASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC62Q6P9F0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 AC011498.5-201ENST00000592027 486 ntBASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC62Q6P9F0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC62Q6P9F0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC62Q6P9F0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC62Q6P9F0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
CCDC62Q6P9F0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CCDC62Q6P9F0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC62Q6P9F0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC62Q6P9F0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms