Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 AC148477.8-201ENST00000624298 468 ntBASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 AC099336.1-202ENST00000602961 463 ntBASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 AL591684.3-201ENST00000605187 298 ntBASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 TP73-AS1-207ENST00000624167 988 ntBASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 IGHGP-201ENST00000390555 1178 ntBASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13DQ5THJ4 AC233702.3-201ENST00000578656 1387 ntBASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AL031284.1-201ENST00000419297 478 ntBASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AC079776.4-201ENST00000511039 504 ntBASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AC055717.3-201ENST00000622967 595 ntBASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 IRX1P1-201ENST00000438849 1838 ntBASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AL357033.4-201ENST00000617703 1807 ntBASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AC034236.2-201ENST00000606662 1610 ntBASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13DQ5THJ4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 AC096582.2-201ENST00000510860 516 ntBASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 RCC2P3-201ENST00000418112 1537 ntBASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 FP475955.4-201ENST00000623131 1990 ntBASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
VPS13DQ5THJ4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms