Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 SLC25A3P1-201ENST00000443844 931 ntBASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 ECEL1P2-202ENST00000465689 757 ntBASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 MIR3180-5-201ENST00000583743 153 ntBASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 AC005363.2-201ENST00000618631 242 ntBASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 AC068587.9-201ENST00000641814 219 ntBASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 AC113347.1-201ENST00000413321 391 ntBASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 DUT-205ENST00000558813 769 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 WWOX-216ENST00000569818 525 ntBASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01556Q5JQF7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 INGX-201ENST00000359239 846 ntBASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 AP000523.1-201ENST00000398242 1049 ntBASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 LIN28AP1-201ENST00000429574 405 ntBASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 MIR4674-201ENST00000582457 87 ntBASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 AC018445.3-201ENST00000624177 1945 ntBASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01556Q5JQF7 AC006333.2-201ENST00000607957 2099 ntBASIC12.74□□□□□ -0.37
LINC01556Q5JQF7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LINC01556Q5JQF7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01556Q5JQF7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01556Q5JQF7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01556Q5JQF7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms