Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.33■□□□□ 0.85
TNFSF9P41273 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.33■□□□□ 0.85
TNFSF9P41273 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.33■□□□□ 0.85
TNFSF9P41273 NEK4P2-201ENST00000580004 1012 ntBASIC20.33■□□□□ 0.85
TNFSF9P41273 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF9P41273 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.33■□□□□ 0.85
TNFSF9P41273 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFSF9P41273 AC083906.6-201ENST00000641366 219 ntBASIC20.33■□□□□ 0.85
TNFSF9P41273 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.33■□□□□ 0.85
TNFSF9P41273 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TNFSF9P41273 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFSF9P41273 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TNFSF9P41273 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.33■□□□□ 0.84
TNFSF9P41273 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFSF9P41273 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFSF9P41273 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.33■□□□□ 0.84
TNFSF9P41273 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
TNFSF9P41273 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.33■□□□□ 0.84
TNFSF9P41273 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.33■□□□□ 0.84
TNFSF9P41273 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFSF9P41273 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TNFSF9P41273 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.32■□□□□ 0.84
TNFSF9P41273 GCSHP2-201ENST00000560971 527 ntBASIC20.32■□□□□ 0.84
TNFSF9P41273 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.32■□□□□ 0.84
TNFSF9P41273 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
TNFSF9P41273 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.32■□□□□ 0.84
TNFSF9P41273 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 AL357033.4-201ENST00000617703 1807 ntBASIC20.32■□□□□ 0.84
TNFSF9P41273 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TNFSF9P41273 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TNFSF9P41273 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF9P41273 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF9P41273 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFSF9P41273 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF9P41273 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF9P41273 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF9P41273 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF9P41273 MIR564-202ENST00000385049 94 ntBASIC20.31■□□□□ 0.84
TNFSF9P41273 RNF152P1-201ENST00000397754 604 ntBASIC20.31■□□□□ 0.84
TNFSF9P41273 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TNFSF9P41273 TSPY5P-201ENST00000426936 936 ntBASIC20.31■□□□□ 0.84
TNFSF9P41273 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFSF9P41273 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF9P41273 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TNFSF9P41273 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.31■□□□□ 0.84
TNFSF9P41273 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.31■□□□□ 0.84
TNFSF9P41273 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.31■□□□□ 0.84
TNFSF9P41273 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF9P41273 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFSF9P41273 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF9P41273 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
TNFSF9P41273 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFSF9P41273 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF9P41273 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF9P41273 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF9P41273 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TNFSF9P41273 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF9P41273 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF9P41273 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TNFSF9P41273 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF9P41273 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFSF9P41273 AC063952.2-201ENST00000498792 1227 ntBASIC20.3■□□□□ 0.84
TNFSF9P41273 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFSF9P41273 AC140113.3-201ENST00000605663 199 ntBASIC20.3■□□□□ 0.84
TNFSF9P41273 AC024243.1-201ENST00000609234 778 ntBASIC20.3■□□□□ 0.84
TNFSF9P41273 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF9P41273 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.3■□□□□ 0.84
TNFSF9P41273 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF9P41273 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TNFSF9P41273 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF9P41273 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF9P41273 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TNFSF9P41273 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.3■□□□□ 0.84
TNFSF9P41273 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.29■□□□□ 0.84
TNFSF9P41273 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF9P41273 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF9P41273 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF9P41273 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF9P41273 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF9P41273 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.29■□□□□ 0.84
TNFSF9P41273 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF9P41273 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms