Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA11P31270 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.31■□□□□ 0.84
HOXA11P31270 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
HOXA11P31270 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HOXA11P31270 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
HOXA11P31270 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HOXA11P31270 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA11P31270 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA11P31270 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA11P31270 AL645929.1-201ENST00000420084 975 ntBASIC20.31■□□□□ 0.84
HOXA11P31270 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA11P31270 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HOXA11P31270 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.31■□□□□ 0.84
HOXA11P31270 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.31■□□□□ 0.84
HOXA11P31270 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.31■□□□□ 0.84
HOXA11P31270 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA11P31270 AL357033.4-201ENST00000617703 1807 ntBASIC20.31■□□□□ 0.84
HOXA11P31270 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HOXA11P31270 MTMR9LP-203ENST00000426597 1545 ntBASIC20.31■□□□□ 0.84
HOXA11P31270 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA11P31270 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA11P31270 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HOXA11P31270 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HOXA11P31270 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA11P31270 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.3■□□□□ 0.84
HOXA11P31270 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA11P31270 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HOXA11P31270 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA11P31270 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA11P31270 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HOXA11P31270 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA11P31270 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.3■□□□□ 0.84
HOXA11P31270 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.3■□□□□ 0.84
HOXA11P31270 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.3■□□□□ 0.84
HOXA11P31270 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HOXA11P31270 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA11P31270 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA11P31270 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA11P31270 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.3■□□□□ 0.84
HOXA11P31270 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HOXA11P31270 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.29■□□□□ 0.84
HOXA11P31270 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HOXA11P31270 Z98044.1-201ENST00000632503 1764 ntBASIC20.29■□□□□ 0.84
HOXA11P31270 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA11P31270 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA11P31270 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HOXA11P31270 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
HOXA11P31270 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HOXA11P31270 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.29■□□□□ 0.84
HOXA11P31270 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.29■□□□□ 0.84
HOXA11P31270 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.29■□□□□ 0.84
HOXA11P31270 AL136038.4-201ENST00000603606 1261 ntBASIC20.29■□□□□ 0.84
HOXA11P31270 AC069148.1-201ENST00000608741 768 ntBASIC20.29■□□□□ 0.84
HOXA11P31270 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA11P31270 AC093458.2-201ENST00000623150 629 ntBASIC20.29■□□□□ 0.84
HOXA11P31270 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HOXA11P31270 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.29■□□□□ 0.84
HOXA11P31270 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.29■□□□□ 0.84
HOXA11P31270 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA11P31270 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA11P31270 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA11P31270 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA11P31270 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA11P31270 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HOXA11P31270 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.29■□□□□ 0.84
HOXA11P31270 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HOXA11P31270 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA11P31270 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA11P31270 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HOXA11P31270 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA11P31270 MIR662-201ENST00000384847 95 ntBASIC20.28■□□□□ 0.84
HOXA11P31270 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.28■□□□□ 0.84
HOXA11P31270 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.28■□□□□ 0.84
HOXA11P31270 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.28■□□□□ 0.84
HOXA11P31270 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.28■□□□□ 0.84
HOXA11P31270 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA11P31270 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
HOXA11P31270 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.28■□□□□ 0.84
HOXA11P31270 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA11P31270 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
HOXA11P31270 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.28■□□□□ 0.84
HOXA11P31270 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA11P31270 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXA11P31270 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HOXA11P31270 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.27■□□□□ 0.84
HOXA11P31270 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA11P31270 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA11P31270 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA11P31270 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA11P31270 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA11P31270 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA11P31270 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA11P31270 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.27■□□□□ 0.84
HOXA11P31270 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXA11P31270 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.27■□□□□ 0.84
HOXA11P31270 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.27■□□□□ 0.84
HOXA11P31270 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HOXA11P31270 AL162741.1-201ENST00000565563 1558 ntBASIC20.27■□□□□ 0.84
HOXA11P31270 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXA11P31270 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms