Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFAP04085 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PDGFAP04085 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PDGFAP04085 NEFHP1-201ENST00000412845 2629 ntBASIC17.55■□□□□ 0.4
PDGFAP04085 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PDGFAP04085 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.55■□□□□ 0.4
PDGFAP04085 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
PDGFAP04085 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
PDGFAP04085 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.55■□□□□ 0.4
PDGFAP04085 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
PDGFAP04085 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.55■□□□□ 0.4
PDGFAP04085 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PDGFAP04085 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.55■□□□□ 0.4
PDGFAP04085 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.55■□□□□ 0.4
PDGFAP04085 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.55■□□□□ 0.4
PDGFAP04085 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PDGFAP04085 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.55■□□□□ 0.4
PDGFAP04085 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.55■□□□□ 0.4
PDGFAP04085 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.55■□□□□ 0.4
PDGFAP04085 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFAP04085 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PDGFAP04085 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PDGFAP04085 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PDGFAP04085 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.54■□□□□ 0.4
PDGFAP04085 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.54■□□□□ 0.4
PDGFAP04085 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFAP04085 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PDGFAP04085 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFAP04085 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.54■□□□□ 0.4
PDGFAP04085 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFAP04085 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFAP04085 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFAP04085 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFAP04085 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.54■□□□□ 0.4
PDGFAP04085 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFAP04085 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFAP04085 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.54■□□□□ 0.4
PDGFAP04085 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.54■□□□□ 0.4
PDGFAP04085 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.54■□□□□ 0.4
PDGFAP04085 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.54■□□□□ 0.4
PDGFAP04085 NPAP1P7-201ENST00000613027 823 ntBASIC17.54■□□□□ 0.4
PDGFAP04085 AL691432.3-201ENST00000621860 400 ntBASIC17.54■□□□□ 0.4
PDGFAP04085 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
PDGFAP04085 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.54■□□□□ 0.4
PDGFAP04085 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.54■□□□□ 0.4
PDGFAP04085 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.54■□□□□ 0.4
PDGFAP04085 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFAP04085 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PDGFAP04085 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFAP04085 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFAP04085 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.53■□□□□ 0.4
PDGFAP04085 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PDGFAP04085 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFAP04085 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PDGFAP04085 AP000974.1-201ENST00000623909 2387 ntBASIC17.53■□□□□ 0.4
PDGFAP04085 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFAP04085 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFAP04085 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFAP04085 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFAP04085 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFAP04085 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFAP04085 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFAP04085 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDGFAP04085 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PDGFAP04085 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.53■□□□□ 0.4
PDGFAP04085 AC092119.3-201ENST00000612618 583 ntBASIC17.53■□□□□ 0.4
PDGFAP04085 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.53■□□□□ 0.4
PDGFAP04085 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.53■□□□□ 0.4
PDGFAP04085 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.53■□□□□ 0.4
PDGFAP04085 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFAP04085 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PDGFAP04085 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFAP04085 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFAP04085 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFAP04085 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.52■□□□□ 0.4
PDGFAP04085 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFAP04085 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFAP04085 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PDGFAP04085 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.52■□□□□ 0.4
PDGFAP04085 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFAP04085 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PDGFAP04085 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PDGFAP04085 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFAP04085 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.52■□□□□ 0.4
PDGFAP04085 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms