Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ALDH1A1P00352 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.43■■□□□ 1.02
ALDH1A1P00352 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ALDH1A1P00352 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
ALDH1A1P00352 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ALDH1A1P00352 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ALDH1A1P00352 PKD1P6-201ENST00000343738 4769 ntBASIC21.43■■□□□ 1.02
ALDH1A1P00352 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.43■■□□□ 1.02
ALDH1A1P00352 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ALDH1A1P00352 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ALDH1A1P00352 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ALDH1A1P00352 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
ALDH1A1P00352 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.42■■□□□ 1.02
ALDH1A1P00352 AL512353.2-201ENST00000448759 1962 ntBASIC21.42■■□□□ 1.02
ALDH1A1P00352 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ALDH1A1P00352 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
ALDH1A1P00352 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ALDH1A1P00352 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.42■■□□□ 1.02
ALDH1A1P00352 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ALDH1A1P00352 AC145285.3-201ENST00000564603 959 ntBASIC21.42■■□□□ 1.02
ALDH1A1P00352 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ALDH1A1P00352 AC022898.2-201ENST00000616822 1312 ntBASIC21.42■■□□□ 1.02
ALDH1A1P00352 FAM197Y3-203ENST00000618346 717 ntBASIC21.42■■□□□ 1.02
ALDH1A1P00352 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.42■■□□□ 1.02
ALDH1A1P00352 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.42■■□□□ 1.02
ALDH1A1P00352 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ALDH1A1P00352 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
ALDH1A1P00352 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ALDH1A1P00352 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.41■■□□□ 1.02
ALDH1A1P00352 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.41■■□□□ 1.02
ALDH1A1P00352 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.41■■□□□ 1.02
ALDH1A1P00352 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ALDH1A1P00352 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.41■■□□□ 1.02
ALDH1A1P00352 AC034236.2-201ENST00000606662 1610 ntBASIC21.41■■□□□ 1.02
ALDH1A1P00352 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ALDH1A1P00352 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ALDH1A1P00352 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ALDH1A1P00352 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ALDH1A1P00352 RBM17P3-201ENST00000417687 1192 ntBASIC21.41■■□□□ 1.02
ALDH1A1P00352 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.41■■□□□ 1.02
ALDH1A1P00352 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.41■■□□□ 1.02
ALDH1A1P00352 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ALDH1A1P00352 AC096582.2-201ENST00000510860 516 ntBASIC21.41■■□□□ 1.02
ALDH1A1P00352 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.41■■□□□ 1.02
ALDH1A1P00352 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.41■■□□□ 1.02
ALDH1A1P00352 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ALDH1A1P00352 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.41■■□□□ 1.02
ALDH1A1P00352 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ALDH1A1P00352 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
ALDH1A1P00352 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
ALDH1A1P00352 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ALDH1A1P00352 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
ALDH1A1P00352 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.41■■□□□ 1.02
ALDH1A1P00352 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ALDH1A1P00352 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ALDH1A1P00352 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.41■■□□□ 1.02
ALDH1A1P00352 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ALDH1A1P00352 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.4■■□□□ 1.02
ALDH1A1P00352 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ALDH1A1P00352 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.4■■□□□ 1.02
ALDH1A1P00352 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
ALDH1A1P00352 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
ALDH1A1P00352 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
ALDH1A1P00352 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ALDH1A1P00352 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ALDH1A1P00352 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.4■■□□□ 1.02
ALDH1A1P00352 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.4■■□□□ 1.02
ALDH1A1P00352 AL591424.1-201ENST00000442569 1213 ntBASIC21.4■■□□□ 1.02
ALDH1A1P00352 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
ALDH1A1P00352 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
ALDH1A1P00352 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.4■■□□□ 1.02
ALDH1A1P00352 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.4■■□□□ 1.02
ALDH1A1P00352 AP001160.2-201ENST00000596071 487 ntBASIC21.4■■□□□ 1.02
ALDH1A1P00352 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ALDH1A1P00352 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
ALDH1A1P00352 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ALDH1A1P00352 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.4■■□□□ 1.02
ALDH1A1P00352 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ALDH1A1P00352 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ALDH1A1P00352 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ALDH1A1P00352 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.39■■□□□ 1.02
ALDH1A1P00352 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
ALDH1A1P00352 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
ALDH1A1P00352 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ALDH1A1P00352 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ALDH1A1P00352 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.39■■□□□ 1.01
ALDH1A1P00352 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ALDH1A1P00352 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.39■■□□□ 1.01
ALDH1A1P00352 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ALDH1A1P00352 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ALDH1A1P00352 URGCP-206ENST00000446958 365 ntTSL 2 BASIC21.39■■□□□ 1.01
ALDH1A1P00352 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ALDH1A1P00352 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.39■■□□□ 1.01
ALDH1A1P00352 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.39■■□□□ 1.01
ALDH1A1P00352 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.39■■□□□ 1.01
ALDH1A1P00352 AC027796.2-201ENST00000575326 344 ntBASIC21.39■■□□□ 1.01
ALDH1A1P00352 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.39■■□□□ 1.01
ALDH1A1P00352 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ALDH1A1P00352 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ALDH1A1P00352 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms