Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MIR4666B-201ENST00000578142 81 ntBASIC-1.58□□□□□ -2.66
COL1A1P02452 RNY1P5-201ENST00000383890 115 ntBASIC-1.59□□□□□ -2.66
COL1A1P02452 MIR3133-201ENST00000583157 78 ntBASIC-1.59□□□□□ -2.66
COL1A1P02452 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.6□□□□□ -2.67
COL1A1P02452 RNY4P30-201ENST00000410216 95 ntBASIC-1.6□□□□□ -2.67
COL1A1P02452 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.6□□□□□ -2.67
COL1A1P02452 AC103706.3-201ENST00000636297 85 ntBASIC-1.6□□□□□ -2.67
COL1A1P02452 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.61□□□□□ -2.67
COL1A1P02452 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 RNU6-32P-201ENST00000383948 107 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 RNU6-13P-201ENST00000384248 107 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 RNU6-12P-201ENST00000384604 107 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 RNU6-41P-201ENST00000384741 107 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 AC008267.6-201ENST00000441664 139 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 RNU6-242P-201ENST00000384359 107 ntBASIC-1.63□□□□□ -2.67
COL1A1P02452 RNU6-808P-201ENST00000391233 108 ntBASIC-1.63□□□□□ -2.67
COL1A1P02452 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.63□□□□□ -2.67
COL1A1P02452 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.63□□□□□ -2.67
COL1A1P02452 MIR633-201ENST00000384821 98 ntBASIC-1.63□□□□□ -2.67
COL1A1P02452 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.63□□□□□ -2.67
COL1A1P02452 RNU6-294P-201ENST00000364999 102 ntBASIC-1.64□□□□□ -2.67
COL1A1P02452 RNU6-81P-201ENST00000365608 104 ntBASIC-1.64□□□□□ -2.67
COL1A1P02452 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.64□□□□□ -2.67
COL1A1P02452 RNU6-463P-201ENST00000384340 107 ntBASIC-1.64□□□□□ -2.67
COL1A1P02452 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.64□□□□□ -2.67
COL1A1P02452 RNA5SP89-201ENST00000410300 108 ntBASIC-1.64□□□□□ -2.67
COL1A1P02452 RNU6-829P-201ENST00000363700 112 ntBASIC-1.65□□□□□ -2.67
COL1A1P02452 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.65□□□□□ -2.67
COL1A1P02452 RNU6-59P-201ENST00000384787 107 ntBASIC-1.65□□□□□ -2.67
COL1A1P02452 RNU6-539P-201ENST00000516665 103 ntBASIC-1.65□□□□□ -2.67
COL1A1P02452 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.66□□□□□ -2.68
COL1A1P02452 AC114801.3-201ENST00000510231 177 ntBASIC-1.66□□□□□ -2.68
COL1A1P02452 Y_RNA.165-201ENST00000363721 102 ntBASIC-1.67□□□□□ -2.68
COL1A1P02452 RNU6-573P-201ENST00000383938 106 ntBASIC-1.67□□□□□ -2.68
COL1A1P02452 RNU6-22P-201ENST00000384355 107 ntBASIC-1.67□□□□□ -2.68
COL1A1P02452 MIR450A2-201ENST00000385022 100 ntBASIC-1.67□□□□□ -2.68
COL1A1P02452 MIR1255A-201ENST00000408338 113 ntBASIC-1.67□□□□□ -2.68
COL1A1P02452 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.68□□□□□ -2.68
COL1A1P02452 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.68□□□□□ -2.68
COL1A1P02452 RNU6-871P-201ENST00000516122 100 ntBASIC-1.69□□□□□ -2.68
COL1A1P02452 RNU6-406P-201ENST00000516470 107 ntBASIC-1.69□□□□□ -2.68
COL1A1P02452 SNORD20-201ENST00000384550 80 ntBASIC-1.7□□□□□ -2.68
COL1A1P02452 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.7□□□□□ -2.68
COL1A1P02452 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.71□□□□□ -2.68
COL1A1P02452 RNU6-838P-201ENST00000363399 108 ntBASIC-1.71□□□□□ -2.68
COL1A1P02452 RNU4-85P-201ENST00000364675 123 ntBASIC-1.71□□□□□ -2.68
COL1A1P02452 RNU6-44P-201ENST00000384045 107 ntBASIC-1.71□□□□□ -2.68
COL1A1P02452 RNU6-857P-201ENST00000515893 110 ntBASIC-1.71□□□□□ -2.68
COL1A1P02452 AC090425.1-201ENST00000610007 140 ntBASIC-1.71□□□□□ -2.68
COL1A1P02452 MT-TG-201ENST00000387429 68 ntBASIC-1.72□□□□□ -2.68
COL1A1P02452 RNA5SP225-201ENST00000410874 135 ntBASIC-1.72□□□□□ -2.68
COL1A1P02452 MIR4679-1-201ENST00000637619 75 ntBASIC-1.73□□□□□ -2.69
COL1A1P02452 RNU6-753P-201ENST00000363926 107 ntBASIC-1.74□□□□□ -2.69
COL1A1P02452 MIR363-201ENST00000384840 75 ntBASIC-1.75□□□□□ -2.69
COL1A1P02452 RNU6-471P-201ENST00000383944 106 ntBASIC-1.75□□□□□ -2.69
COL1A1P02452 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.75□□□□□ -2.69
COL1A1P02452 RNU6-313P-201ENST00000516317 112 ntBASIC-1.75□□□□□ -2.69
COL1A1P02452 SNORD113-1-201ENST00000365321 69 ntBASIC-1.76□□□□□ -2.69
COL1A1P02452 RNU6-820P-201ENST00000384273 107 ntBASIC-1.76□□□□□ -2.69
COL1A1P02452 MIR5582-201ENST00000579697 68 ntBASIC-1.76□□□□□ -2.69
COL1A1P02452 RNU6-620P-201ENST00000384017 96 ntBASIC-1.77□□□□□ -2.69
COL1A1P02452 SNORD111B-201ENST00000408587 80 ntBASIC-1.77□□□□□ -2.69
COL1A1P02452 RNU6-215P-201ENST00000365169 102 ntBASIC-1.78□□□□□ -2.69
COL1A1P02452 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.78□□□□□ -2.69
COL1A1P02452 MIR548F3-201ENST00000408509 87 ntBASIC-1.79□□□□□ -2.7
COL1A1P02452 RNU6-936P-201ENST00000384005 107 ntBASIC-1.8□□□□□ -2.7
COL1A1P02452 RNU6-279P-201ENST00000391297 101 ntBASIC-1.8□□□□□ -2.7
COL1A1P02452 RNU6-919P-201ENST00000516731 104 ntBASIC-1.8□□□□□ -2.7
COL1A1P02452 SNORD73B-201ENST00000364394 72 ntBASIC-1.81□□□□□ -2.7
COL1A1P02452 SNORA26.2-201ENST00000390922 122 ntBASIC-1.81□□□□□ -2.7
COL1A1P02452 RNU6-627P-201ENST00000364032 102 ntBASIC-1.82□□□□□ -2.7
COL1A1P02452 RNU6-930P-201ENST00000390938 100 ntBASIC-1.82□□□□□ -2.7
COL1A1P02452 RNU6-153P-201ENST00000364422 104 ntBASIC-1.82□□□□□ -2.7
COL1A1P02452 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.82□□□□□ -2.7
COL1A1P02452 AC079150.2-201ENST00000443733 78 ntBASIC-1.82□□□□□ -2.7
COL1A1P02452 MIR3202-2-201ENST00000635980 79 ntBASIC-1.82□□□□□ -2.7
COL1A1P02452 RNU6-916P-201ENST00000516088 109 ntBASIC-1.83□□□□□ -2.7
COL1A1P02452 Y_RNA.15-201ENST00000362420 102 ntBASIC-1.85□□□□□ -2.71
COL1A1P02452 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.85□□□□□ -2.71
COL1A1P02452 RNY4P29-201ENST00000410801 97 ntBASIC-1.85□□□□□ -2.71
COL1A1P02452 AL606753.1-201ENST00000427435 87 ntBASIC-1.85□□□□□ -2.71
COL1A1P02452 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.86□□□□□ -2.71
COL1A1P02452 SNORD78.1-201ENST00000390866 65 ntBASIC-1.86□□□□□ -2.71
COL1A1P02452 MIR3910-1-201ENST00000580936 111 ntBASIC-1.88□□□□□ -2.71
COL1A1P02452 RNU6-485P-201ENST00000363475 107 ntBASIC-1.88□□□□□ -2.71
COL1A1P02452 AP001094.1-201ENST00000579805 193 ntBASIC-1.88□□□□□ -2.71
COL1A1P02452 MIR4662A-201ENST00000637499 67 ntBASIC-1.88□□□□□ -2.71
COL1A1P02452 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.89□□□□□ -2.71
COL1A1P02452 RNU6-1091P-201ENST00000363945 107 ntBASIC-1.9□□□□□ -2.71
COL1A1P02452 MT-TR-201ENST00000387439 65 ntBASIC-1.9□□□□□ -2.71
COL1A1P02452 AC099654.10-201ENST00000640395 161 ntBASIC-1.9□□□□□ -2.71
COL1A1P02452 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.91□□□□□ -2.72
COL1A1P02452 MIR548M-201ENST00000408260 86 ntBASIC-1.92□□□□□ -2.72
COL1A1P02452 RNU6-499P-201ENST00000365615 107 ntBASIC-1.93□□□□□ -2.72
COL1A1P02452 RNU6-794P-201ENST00000517261 64 ntBASIC-1.93□□□□□ -2.72
COL1A1P02452 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.94□□□□□ -2.72
COL1A1P02452 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.96□□□□□ -2.72
COL1A1P02452 AC125388.1-201ENST00000459631 156 ntBASIC-1.96□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms