Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.37□□□□□ -2.63
TRIM54Q9BYV2 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.38□□□□□ -2.63
TRIM54Q9BYV2 RNU6-828P-201ENST00000364876 107 ntBASIC-1.39□□□□□ -2.63
TRIM54Q9BYV2 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.39□□□□□ -2.63
TRIM54Q9BYV2 RNU6-841P-201ENST00000383872 107 ntBASIC-1.39□□□□□ -2.63
TRIM54Q9BYV2 MIR487B-201ENST00000385021 84 ntBASIC-1.39□□□□□ -2.63
TRIM54Q9BYV2 MIR496-201ENST00000385226 102 ntBASIC-1.39□□□□□ -2.63
TRIM54Q9BYV2 RNU6-983P-201ENST00000516004 103 ntBASIC-1.39□□□□□ -2.63
TRIM54Q9BYV2 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.39□□□□□ -2.63
TRIM54Q9BYV2 AC125388.1-201ENST00000459631 156 ntBASIC-1.4□□□□□ -2.63
TRIM54Q9BYV2 AC108019.1-201ENST00000512540 175 ntBASIC-1.4□□□□□ -2.63
TRIM54Q9BYV2 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.41□□□□□ -2.64
TRIM54Q9BYV2 AC120024.2-201ENST00000576526 175 ntBASIC-1.41□□□□□ -2.64
TRIM54Q9BYV2 MIR3123-201ENST00000583417 75 ntBASIC-1.41□□□□□ -2.64
TRIM54Q9BYV2 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.41□□□□□ -2.64
TRIM54Q9BYV2 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.42□□□□□ -2.64
TRIM54Q9BYV2 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.42□□□□□ -2.64
TRIM54Q9BYV2 SNORA27.2-201ENST00000363365 126 ntBASIC-1.43□□□□□ -2.64
TRIM54Q9BYV2 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.43□□□□□ -2.64
TRIM54Q9BYV2 RNU6-563P-201ENST00000364872 108 ntBASIC-1.44□□□□□ -2.64
TRIM54Q9BYV2 SNORA40.16-201ENST00000517238 121 ntBASIC-1.44□□□□□ -2.64
TRIM54Q9BYV2 MIR548AM-201ENST00000584298 74 ntBASIC-1.44□□□□□ -2.64
TRIM54Q9BYV2 MIR664B-201ENST00000626756 61 ntBASIC-1.44□□□□□ -2.64
TRIM54Q9BYV2 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.45□□□□□ -2.64
TRIM54Q9BYV2 RNU6-258P-201ENST00000390884 101 ntBASIC-1.46□□□□□ -2.64
TRIM54Q9BYV2 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.46□□□□□ -2.64
TRIM54Q9BYV2 MIR4756-201ENST00000577874 78 ntBASIC-1.47□□□□□ -2.64
TRIM54Q9BYV2 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.47□□□□□ -2.64
TRIM54Q9BYV2 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.48□□□□□ -2.65
TRIM54Q9BYV2 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.49□□□□□ -2.65
TRIM54Q9BYV2 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.5□□□□□ -2.65
TRIM54Q9BYV2 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.5□□□□□ -2.65
TRIM54Q9BYV2 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.53□□□□□ -2.65
TRIM54Q9BYV2 RNU4-88P-201ENST00000411220 86 ntBASIC-1.53□□□□□ -2.65
TRIM54Q9BYV2 AC013734.1-201ENST00000619329 111 ntBASIC-1.53□□□□□ -2.65
TRIM54Q9BYV2 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.54□□□□□ -2.66
TRIM54Q9BYV2 RNU6-974P-201ENST00000384099 108 ntBASIC-1.55□□□□□ -2.66
TRIM54Q9BYV2 RNU6-980P-201ENST00000516925 103 ntBASIC-1.55□□□□□ -2.66
TRIM54Q9BYV2 SNORD45.2-201ENST00000363552 72 ntBASIC-1.56□□□□□ -2.66
TRIM54Q9BYV2 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.57□□□□□ -2.66
TRIM54Q9BYV2 MIR548W-201ENST00000581970 74 ntBASIC-1.57□□□□□ -2.66
TRIM54Q9BYV2 RNA5SP93-201ENST00000362525 114 ntBASIC-1.58□□□□□ -2.66
TRIM54Q9BYV2 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.58□□□□□ -2.66
TRIM54Q9BYV2 AC139453.2-201ENST00000487255 133 ntBASIC-1.58□□□□□ -2.66
TRIM54Q9BYV2 RNY4-201ENST00000516507 96 ntBASIC-1.58□□□□□ -2.66
TRIM54Q9BYV2 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.58□□□□□ -2.66
TRIM54Q9BYV2 SNORD18C-201ENST00000362704 69 ntBASIC-1.59□□□□□ -2.66
TRIM54Q9BYV2 RNA5SP405-201ENST00000363059 114 ntBASIC-1.59□□□□□ -2.66
TRIM54Q9BYV2 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.59□□□□□ -2.66
TRIM54Q9BYV2 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.6□□□□□ -2.67
TRIM54Q9BYV2 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.6□□□□□ -2.67
TRIM54Q9BYV2 SNORD54-201ENST00000459159 67 ntBASIC-1.6□□□□□ -2.67
TRIM54Q9BYV2 MIR4748-201ENST00000578076 82 ntBASIC-1.6□□□□□ -2.67
TRIM54Q9BYV2 snoU13.10-201ENST00000459301 103 ntBASIC-1.61□□□□□ -2.67
TRIM54Q9BYV2 RNY3P8-201ENST00000411366 126 ntBASIC-1.62□□□□□ -2.67
TRIM54Q9BYV2 MIR548N-201ENST00000408742 75 ntBASIC-1.63□□□□□ -2.67
TRIM54Q9BYV2 AL451105.1-201ENST00000450005 189 ntBASIC-1.63□□□□□ -2.67
TRIM54Q9BYV2 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.63□□□□□ -2.67
TRIM54Q9BYV2 U6.97-201ENST00000636904 101 ntBASIC-1.63□□□□□ -2.67
TRIM54Q9BYV2 MIR581-201ENST00000384895 96 ntBASIC-1.64□□□□□ -2.67
TRIM54Q9BYV2 RNU6-118P-201ENST00000516552 102 ntBASIC-1.65□□□□□ -2.67
TRIM54Q9BYV2 RNU6-419P-201ENST00000517030 63 ntBASIC-1.65□□□□□ -2.67
TRIM54Q9BYV2 RNU6-194P-201ENST00000363862 105 ntBASIC-1.66□□□□□ -2.68
TRIM54Q9BYV2 MIR633-201ENST00000384821 98 ntBASIC-1.66□□□□□ -2.68
TRIM54Q9BYV2 AC097484.2-201ENST00000509147 251 ntBASIC-1.66□□□□□ -2.68
TRIM54Q9BYV2 FTX_4.1-201ENST00000616291 147 ntBASIC-1.66□□□□□ -2.68
TRIM54Q9BYV2 RNU6-361P-201ENST00000364454 107 ntBASIC-1.67□□□□□ -2.68
TRIM54Q9BYV2 SNORD60-201ENST00000383903 83 ntBASIC-1.67□□□□□ -2.68
TRIM54Q9BYV2 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.67□□□□□ -2.68
TRIM54Q9BYV2 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.68□□□□□ -2.68
TRIM54Q9BYV2 RNU6-446P-201ENST00000362827 106 ntBASIC-1.68□□□□□ -2.68
TRIM54Q9BYV2 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.69□□□□□ -2.68
TRIM54Q9BYV2 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.7□□□□□ -2.68
TRIM54Q9BYV2 RNU6-530P-201ENST00000391180 107 ntBASIC-1.7□□□□□ -2.68
TRIM54Q9BYV2 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.72□□□□□ -2.68
TRIM54Q9BYV2 SNORA17.4-201ENST00000391287 132 ntBASIC-1.72□□□□□ -2.68
TRIM54Q9BYV2 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.72□□□□□ -2.68
TRIM54Q9BYV2 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.72□□□□□ -2.68
TRIM54Q9BYV2 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.72□□□□□ -2.68
TRIM54Q9BYV2 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.72□□□□□ -2.68
TRIM54Q9BYV2 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.72□□□□□ -2.68
TRIM54Q9BYV2 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.72□□□□□ -2.68
TRIM54Q9BYV2 MIR202-201ENST00000362219 110 ntBASIC-1.73□□□□□ -2.69
TRIM54Q9BYV2 RNU6-829P-201ENST00000363700 112 ntBASIC-1.73□□□□□ -2.69
TRIM54Q9BYV2 MIR3139-201ENST00000579145 76 ntBASIC-1.73□□□□□ -2.69
TRIM54Q9BYV2 MIR548X-201ENST00000580069 75 ntBASIC-1.73□□□□□ -2.69
TRIM54Q9BYV2 MIR379-201ENST00000362218 67 ntBASIC-1.75□□□□□ -2.69
TRIM54Q9BYV2 RNU6-788P-201ENST00000390967 104 ntBASIC-1.75□□□□□ -2.69
TRIM54Q9BYV2 RNU6-68P-201ENST00000516576 104 ntBASIC-1.75□□□□□ -2.69
TRIM54Q9BYV2 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.76□□□□□ -2.69
TRIM54Q9BYV2 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.78□□□□□ -2.69
TRIM54Q9BYV2 AC079150.2-201ENST00000443733 78 ntBASIC-1.78□□□□□ -2.69
TRIM54Q9BYV2 RNU6-499P-201ENST00000365615 107 ntBASIC-1.79□□□□□ -2.7
TRIM54Q9BYV2 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.8□□□□□ -2.7
TRIM54Q9BYV2 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.8□□□□□ -2.7
TRIM54Q9BYV2 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.8□□□□□ -2.7
TRIM54Q9BYV2 RNY4P9-201ENST00000363194 97 ntBASIC-1.81□□□□□ -2.7
TRIM54Q9BYV2 SNORD113-3-201ENST00000364830 72 ntBASIC-1.81□□□□□ -2.7
TRIM54Q9BYV2 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.81□□□□□ -2.7
TRIM54Q9BYV2 RNU6-176P-201ENST00000517196 105 ntBASIC-1.81□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 224.1 ms