Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.36□□□□□ -2.63
PEPDP12955 SNORA40B-201ENST00000385573 128 ntBASIC-1.36□□□□□ -2.63
PEPDP12955 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.36□□□□□ -2.63
PEPDP12955 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.37□□□□□ -2.63
PEPDP12955 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.37□□□□□ -2.63
PEPDP12955 MIR466-201ENST00000580653 84 ntBASIC-1.37□□□□□ -2.63
PEPDP12955 RNU6-247P-201ENST00000362636 107 ntBASIC-1.38□□□□□ -2.63
PEPDP12955 RNU6-828P-201ENST00000364876 107 ntBASIC-1.38□□□□□ -2.63
PEPDP12955 MIR4520-1-201ENST00000582609 70 ntBASIC-1.39□□□□□ -2.63
PEPDP12955 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.4□□□□□ -2.63
PEPDP12955 MIR579-201ENST00000385221 98 ntBASIC-1.41□□□□□ -2.64
PEPDP12955 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.42□□□□□ -2.64
PEPDP12955 SNORA40.16-201ENST00000517238 121 ntBASIC-1.42□□□□□ -2.64
PEPDP12955 MIR6874-201ENST00000635894 71 ntBASIC-1.42□□□□□ -2.64
PEPDP12955 RNU6-810P-201ENST00000364001 107 ntBASIC-1.43□□□□□ -2.64
PEPDP12955 RNU6-79P-201ENST00000362511 107 ntBASIC-1.44□□□□□ -2.64
PEPDP12955 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.44□□□□□ -2.64
PEPDP12955 RNA5SP86-201ENST00000390869 98 ntBASIC-1.44□□□□□ -2.64
PEPDP12955 SNORD116.2-201ENST00000391251 93 ntBASIC-1.44□□□□□ -2.64
PEPDP12955 AC018880.2-201ENST00000414265 201 ntBASIC-1.44□□□□□ -2.64
PEPDP12955 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.45□□□□□ -2.64
PEPDP12955 RNU6-258P-201ENST00000390884 101 ntBASIC-1.45□□□□□ -2.64
PEPDP12955 SNORD63.2-201ENST00000516303 64 ntBASIC-1.45□□□□□ -2.64
PEPDP12955 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.46□□□□□ -2.64
PEPDP12955 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.46□□□□□ -2.64
PEPDP12955 RNU6-803P-201ENST00000516034 102 ntBASIC-1.47□□□□□ -2.64
PEPDP12955 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.48□□□□□ -2.65
PEPDP12955 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.48□□□□□ -2.65
PEPDP12955 RNU6-400P-201ENST00000391173 106 ntBASIC-1.5□□□□□ -2.65
PEPDP12955 MIR4756-201ENST00000577874 78 ntBASIC-1.5□□□□□ -2.65
PEPDP12955 SNORD45.2-201ENST00000363552 72 ntBASIC-1.53□□□□□ -2.65
PEPDP12955 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.53□□□□□ -2.65
PEPDP12955 MIR664B-201ENST00000626756 61 ntBASIC-1.53□□□□□ -2.65
PEPDP12955 MIR6502-201ENST00000617296 76 ntBASIC-1.54□□□□□ -2.66
PEPDP12955 AC125388.1-201ENST00000459631 156 ntBASIC-1.55□□□□□ -2.66
PEPDP12955 AC108019.1-201ENST00000512540 175 ntBASIC-1.55□□□□□ -2.66
PEPDP12955 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
PEPDP12955 AL451105.1-201ENST00000450005 189 ntBASIC-1.56□□□□□ -2.66
PEPDP12955 RNU6-419P-201ENST00000517030 63 ntBASIC-1.56□□□□□ -2.66
PEPDP12955 AC120024.2-201ENST00000576526 175 ntBASIC-1.56□□□□□ -2.66
PEPDP12955 RNU6-974P-201ENST00000384099 108 ntBASIC-1.57□□□□□ -2.66
PEPDP12955 MIR548H1-201ENST00000408610 102 ntBASIC-1.57□□□□□ -2.66
PEPDP12955 RNA5SP405-201ENST00000363059 114 ntBASIC-1.58□□□□□ -2.66
PEPDP12955 MIR487B-201ENST00000385021 84 ntBASIC-1.59□□□□□ -2.66
PEPDP12955 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
PEPDP12955 AC139453.2-201ENST00000487255 133 ntBASIC-1.59□□□□□ -2.66
PEPDP12955 RNU6-563P-201ENST00000364872 108 ntBASIC-1.6□□□□□ -2.67
PEPDP12955 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.61□□□□□ -2.67
PEPDP12955 RNU6-361P-201ENST00000364454 107 ntBASIC-1.62□□□□□ -2.67
PEPDP12955 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.62□□□□□ -2.67
PEPDP12955 RNU6-446P-201ENST00000362827 106 ntBASIC-1.64□□□□□ -2.67
PEPDP12955 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.65□□□□□ -2.67
PEPDP12955 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.65□□□□□ -2.67
PEPDP12955 RNY3P8-201ENST00000411366 126 ntBASIC-1.66□□□□□ -2.68
PEPDP12955 MIR548X-201ENST00000580069 75 ntBASIC-1.66□□□□□ -2.68
PEPDP12955 AC013734.1-201ENST00000619329 111 ntBASIC-1.68□□□□□ -2.68
PEPDP12955 SNORD60-201ENST00000383903 83 ntBASIC-1.7□□□□□ -2.68
PEPDP12955 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.71□□□□□ -2.68
PEPDP12955 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.71□□□□□ -2.68
PEPDP12955 RNU6-695P-201ENST00000391157 104 ntBASIC-1.71□□□□□ -2.68
PEPDP12955 MIR548N-201ENST00000408742 75 ntBASIC-1.71□□□□□ -2.68
PEPDP12955 RNU6-230P-201ENST00000362457 104 ntBASIC-1.73□□□□□ -2.69
PEPDP12955 RNU6-829P-201ENST00000363700 112 ntBASIC-1.73□□□□□ -2.69
PEPDP12955 SNORA17.4-201ENST00000391287 132 ntBASIC-1.74□□□□□ -2.69
PEPDP12955 U6.97-201ENST00000636904 101 ntBASIC-1.74□□□□□ -2.69
PEPDP12955 SNORD18C-201ENST00000362704 69 ntBASIC-1.75□□□□□ -2.69
PEPDP12955 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.75□□□□□ -2.69
PEPDP12955 RNU6-176P-201ENST00000517196 105 ntBASIC-1.75□□□□□ -2.69
PEPDP12955 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.76□□□□□ -2.69
PEPDP12955 RNU6-194P-201ENST00000363862 105 ntBASIC-1.76□□□□□ -2.69
PEPDP12955 AC079150.2-201ENST00000443733 78 ntBASIC-1.76□□□□□ -2.69
PEPDP12955 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.77□□□□□ -2.69
PEPDP12955 RNU6-788P-201ENST00000390967 104 ntBASIC-1.77□□□□□ -2.69
PEPDP12955 RNU6-530P-201ENST00000391180 107 ntBASIC-1.77□□□□□ -2.69
PEPDP12955 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.78□□□□□ -2.69
PEPDP12955 RNU6-499P-201ENST00000365615 107 ntBASIC-1.79□□□□□ -2.7
PEPDP12955 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.79□□□□□ -2.7
PEPDP12955 MIR202-201ENST00000362219 110 ntBASIC-1.8□□□□□ -2.7
PEPDP12955 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.8□□□□□ -2.7
PEPDP12955 MIR633-201ENST00000384821 98 ntBASIC-1.8□□□□□ -2.7
PEPDP12955 MIR3123-201ENST00000583417 75 ntBASIC-1.8□□□□□ -2.7
PEPDP12955 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.81□□□□□ -2.7
PEPDP12955 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.82□□□□□ -2.7
PEPDP12955 SNORD113-4-201ENST00000364802 75 ntBASIC-1.83□□□□□ -2.7
PEPDP12955 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.83□□□□□ -2.7
PEPDP12955 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.84□□□□□ -2.7
PEPDP12955 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.85□□□□□ -2.71
PEPDP12955 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.85□□□□□ -2.71
PEPDP12955 MIR4426-201ENST00000640330 63 ntBASIC-1.85□□□□□ -2.71
PEPDP12955 RNU6-841P-201ENST00000383872 107 ntBASIC-1.86□□□□□ -2.71
PEPDP12955 MIR581-201ENST00000384895 96 ntBASIC-1.87□□□□□ -2.71
PEPDP12955 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.89□□□□□ -2.71
PEPDP12955 MIR379-201ENST00000362218 67 ntBASIC-1.9□□□□□ -2.71
PEPDP12955 RNU4-33P-201ENST00000364316 85 ntBASIC-1.9□□□□□ -2.71
PEPDP12955 RNU6-300P-201ENST00000459080 104 ntBASIC-1.91□□□□□ -2.72
PEPDP12955 MIR548AM-201ENST00000584298 74 ntBASIC-1.92□□□□□ -2.72
PEPDP12955 RNU6-742P-201ENST00000365289 107 ntBASIC-1.96□□□□□ -2.72
PEPDP12955 RNA5SP106-201ENST00000517274 100 ntBASIC-1.97□□□□□ -2.72
PEPDP12955 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.99□□□□□ -2.73
PEPDP12955 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.99□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms