Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 RNU6-474P-201ENST00000384243 107 ntBASIC-2.02□□□□□ -2.73
COL6A3P12111 Y_RNA.574-201ENST00000384766 95 ntBASIC-2.02□□□□□ -2.73
COL6A3P12111 AL589823.1-201ENST00000429577 183 ntBASIC-2.02□□□□□ -2.73
COL6A3P12111 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.02□□□□□ -2.73
COL6A3P12111 RNU6-675P-201ENST00000384236 104 ntBASIC-2.02□□□□□ -2.73
COL6A3P12111 RNU6-959P-201ENST00000384671 107 ntBASIC-2.02□□□□□ -2.73
COL6A3P12111 RNU6-844P-201ENST00000517175 102 ntBASIC-2.03□□□□□ -2.73
COL6A3P12111 AL353621.2-201ENST00000605340 133 ntBASIC-2.03□□□□□ -2.73
COL6A3P12111 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.03□□□□□ -2.73
COL6A3P12111 AL031737.1-201ENST00000450125 223 ntBASIC-2.04□□□□□ -2.74
COL6A3P12111 RNU6-808P-201ENST00000391233 108 ntBASIC-2.04□□□□□ -2.74
COL6A3P12111 RNU6-209P-201ENST00000384118 107 ntBASIC-2.04□□□□□ -2.74
COL6A3P12111 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.05□□□□□ -2.74
COL6A3P12111 MIR4511-201ENST00000582784 87 ntBASIC-2.05□□□□□ -2.74
COL6A3P12111 Y_RNA.460-201ENST00000384255 102 ntBASIC-2.06□□□□□ -2.74
COL6A3P12111 RNU6-875P-201ENST00000516488 106 ntBASIC-2.06□□□□□ -2.74
COL6A3P12111 MIR3134-201ENST00000579433 74 ntBASIC-2.06□□□□□ -2.74
COL6A3P12111 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.06□□□□□ -2.74
COL6A3P12111 RNU6-627P-201ENST00000364032 102 ntBASIC-2.06□□□□□ -2.74
COL6A3P12111 RNU7-171P-201ENST00000459581 62 ntBASIC-2.06□□□□□ -2.74
COL6A3P12111 MIR4679-1-201ENST00000637619 75 ntBASIC-2.06□□□□□ -2.74
COL6A3P12111 AC110620.1-201ENST00000416042 228 ntBASIC-2.06□□□□□ -2.74
COL6A3P12111 MIR3171-201ENST00000584270 74 ntBASIC-2.06□□□□□ -2.74
COL6A3P12111 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.06□□□□□ -2.74
COL6A3P12111 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.07□□□□□ -2.74
COL6A3P12111 U7.4-201ENST00000614961 63 ntBASIC-2.07□□□□□ -2.74
COL6A3P12111 MT-TD-201ENST00000387419 68 ntBASIC-2.07□□□□□ -2.74
COL6A3P12111 AC103706.3-201ENST00000636297 85 ntBASIC-2.07□□□□□ -2.74
COL6A3P12111 SNORA25.4-201ENST00000363666 124 ntBASIC-2.08□□□□□ -2.74
COL6A3P12111 Y_RNA.297-201ENST00000364950 91 ntBASIC-2.08□□□□□ -2.74
COL6A3P12111 Y_RNA.356-201ENST00000365475 113 ntBASIC-2.08□□□□□ -2.74
COL6A3P12111 MIR569-201ENST00000385228 96 ntBASIC-2.08□□□□□ -2.74
COL6A3P12111 MTND4P29-201ENST00000503122 1372 ntBASIC-2.08□□□□□ -2.74
COL6A3P12111 RNY4P19-201ENST00000362530 96 ntBASIC-2.08□□□□□ -2.74
COL6A3P12111 RNU6-804P-201ENST00000384286 107 ntBASIC-2.08□□□□□ -2.74
COL6A3P12111 MALAT1.1-201ENST00000618249 95 ntBASIC-2.08□□□□□ -2.74
COL6A3P12111 SNORA20.1-201ENST00000364790 130 ntBASIC-2.09□□□□□ -2.74
COL6A3P12111 MIR548F1-201ENST00000408667 84 ntBASIC-2.09□□□□□ -2.74
COL6A3P12111 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.09□□□□□ -2.74
COL6A3P12111 RNU6-986P-201ENST00000363133 102 ntBASIC-2.09□□□□□ -2.74
COL6A3P12111 AC044792.1-201ENST00000593294 196 ntBASIC-2.1□□□□□ -2.75
COL6A3P12111 MTND5P20-201ENST00000448677 143 ntBASIC-2.1□□□□□ -2.75
COL6A3P12111 RNU6-1023P-201ENST00000516137 106 ntBASIC-2.11□□□□□ -2.75
COL6A3P12111 MTND5P41-201ENST00000517498 206 ntBASIC-2.11□□□□□ -2.75
COL6A3P12111 AC090425.1-201ENST00000610007 140 ntBASIC-2.11□□□□□ -2.75
COL6A3P12111 SNORD113-1-201ENST00000365321 69 ntBASIC-2.11□□□□□ -2.75
COL6A3P12111 Y_RNA.350-201ENST00000365409 98 ntBASIC-2.11□□□□□ -2.75
COL6A3P12111 IGLL4P-201ENST00000614590 133 ntBASIC-2.11□□□□□ -2.75
COL6A3P12111 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.12□□□□□ -2.75
COL6A3P12111 Y_RNA.138-201ENST00000363462 102 ntBASIC-2.12□□□□□ -2.75
COL6A3P12111 RNU6-634P-201ENST00000459134 106 ntBASIC-2.12□□□□□ -2.75
COL6A3P12111 MTND3P3-201ENST00000505004 126 ntBASIC-2.12□□□□□ -2.75
COL6A3P12111 RNU6-787P-201ENST00000384032 107 ntBASIC-2.14□□□□□ -2.75
COL6A3P12111 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.14□□□□□ -2.75
COL6A3P12111 RNU7-120P-201ENST00000459334 63 ntBASIC-2.14□□□□□ -2.75
COL6A3P12111 RNU6-539P-201ENST00000516665 103 ntBASIC-2.15□□□□□ -2.75
COL6A3P12111 MIR1245B-201ENST00000636115 69 ntBASIC-2.15□□□□□ -2.75
COL6A3P12111 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.15□□□□□ -2.75
COL6A3P12111 MTATP8P1-201ENST00000467115 207 ntBASIC-2.15□□□□□ -2.75
COL6A3P12111 MIR4666B-201ENST00000578142 81 ntBASIC-2.15□□□□□ -2.75
COL6A3P12111 RNU6-257P-201ENST00000410238 98 ntBASIC-2.16□□□□□ -2.75
COL6A3P12111 SNORD30.1-201ENST00000391309 70 ntBASIC-2.16□□□□□ -2.76
COL6A3P12111 RNU6-838P-201ENST00000363399 108 ntBASIC-2.16□□□□□ -2.76
COL6A3P12111 MIR5588-201ENST00000581890 63 ntBASIC-2.16□□□□□ -2.76
COL6A3P12111 RNU6-623P-201ENST00000363143 105 ntBASIC-2.17□□□□□ -2.76
COL6A3P12111 RNU6-871P-201ENST00000516122 100 ntBASIC-2.17□□□□□ -2.76
COL6A3P12111 AC062037.2-201ENST00000610137 73 ntBASIC-2.17□□□□□ -2.76
COL6A3P12111 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.17□□□□□ -2.76
COL6A3P12111 RNU6-59P-201ENST00000384787 107 ntBASIC-2.18□□□□□ -2.76
COL6A3P12111 AL117351.2-201ENST00000513571 157 ntBASIC-2.18□□□□□ -2.76
COL6A3P12111 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-2.18□□□□□ -2.76
COL6A3P12111 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.18□□□□□ -2.76
COL6A3P12111 MIR4795-201ENST00000584182 89 ntBASIC-2.18□□□□□ -2.76
COL6A3P12111 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.19□□□□□ -2.76
COL6A3P12111 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.19□□□□□ -2.76
COL6A3P12111 MIR4712-201ENST00000583750 82 ntBASIC-2.19□□□□□ -2.76
COL6A3P12111 Y_RNA.216-201ENST00000364205 93 ntBASIC-2.2□□□□□ -2.76
COL6A3P12111 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.2□□□□□ -2.76
COL6A3P12111 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.2□□□□□ -2.76
COL6A3P12111 RNU6-829P-201ENST00000363700 112 ntBASIC-2.2□□□□□ -2.76
COL6A3P12111 RNU6-200P-201ENST00000364743 107 ntBASIC-2.2□□□□□ -2.76
COL6A3P12111 RNU6-620P-201ENST00000384017 96 ntBASIC-2.2□□□□□ -2.76
COL6A3P12111 RNU6-1160P-201ENST00000384546 104 ntBASIC-2.21□□□□□ -2.76
COL6A3P12111 MIR548F4-201ENST00000408515 105 ntBASIC-2.21□□□□□ -2.76
COL6A3P12111 RNU6-446P-201ENST00000362827 106 ntBASIC-2.22□□□□□ -2.76
COL6A3P12111 Y_RNA.422-201ENST00000384054 114 ntBASIC-2.22□□□□□ -2.76
COL6A3P12111 AC114801.3-201ENST00000510231 177 ntBASIC-2.22□□□□□ -2.76
COL6A3P12111 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.22□□□□□ -2.76
COL6A3P12111 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.22□□□□□ -2.76
COL6A3P12111 RNU6-589P-201ENST00000516485 107 ntBASIC-2.22□□□□□ -2.76
COL6A3P12111 MIR450A1-201ENST00000362262 91 ntBASIC-2.23□□□□□ -2.77
COL6A3P12111 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.23□□□□□ -2.77
COL6A3P12111 MIR494-201ENST00000349529 81 ntBASIC-2.24□□□□□ -2.77
COL6A3P12111 AC008737.2-201ENST00000599446 118 ntBASIC-2.24□□□□□ -2.77
COL6A3P12111 SNORD113-4-201ENST00000364802 75 ntBASIC-2.24□□□□□ -2.77
COL6A3P12111 RNU6-242P-201ENST00000384359 107 ntBASIC-2.24□□□□□ -2.77
COL6A3P12111 RNU6-471P-201ENST00000383944 106 ntBASIC-2.25□□□□□ -2.77
COL6A3P12111 RNU7-200P-201ENST00000516105 62 ntBASIC-2.25□□□□□ -2.77
COL6A3P12111 Y_RNA.149-201ENST00000363558 117 ntBASIC-2.26□□□□□ -2.77
COL6A3P12111 SNORD116-14-201ENST00000383894 92 ntBASIC-2.26□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 247.2 ms