Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.39□□□□□ -2.63
NKX2-8O15522 SNORA40B-201ENST00000385573 128 ntBASIC-1.39□□□□□ -2.63
NKX2-8O15522 MIR23C-201ENST00000579846 100 ntBASIC-1.39□□□□□ -2.63
NKX2-8O15522 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.4□□□□□ -2.63
NKX2-8O15522 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.41□□□□□ -2.64
NKX2-8O15522 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.41□□□□□ -2.64
NKX2-8O15522 RNU6-258P-201ENST00000390884 101 ntBASIC-1.41□□□□□ -2.64
NKX2-8O15522 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.41□□□□□ -2.64
NKX2-8O15522 RNU6-828P-201ENST00000364876 107 ntBASIC-1.42□□□□□ -2.64
NKX2-8O15522 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.42□□□□□ -2.64
NKX2-8O15522 RNU6-520P-201ENST00000384717 104 ntBASIC-1.42□□□□□ -2.64
NKX2-8O15522 SNORA27.2-201ENST00000363365 126 ntBASIC-1.43□□□□□ -2.64
NKX2-8O15522 RNU6-119P-201ENST00000364882 107 ntBASIC-1.43□□□□□ -2.64
NKX2-8O15522 AC018880.2-201ENST00000414265 201 ntBASIC-1.43□□□□□ -2.64
NKX2-8O15522 RNA5SP405-201ENST00000363059 114 ntBASIC-1.44□□□□□ -2.64
NKX2-8O15522 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.44□□□□□ -2.64
NKX2-8O15522 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.45□□□□□ -2.64
NKX2-8O15522 MT-TM-201ENST00000387377 68 ntBASIC-1.45□□□□□ -2.64
NKX2-8O15522 SNORA40.16-201ENST00000517238 121 ntBASIC-1.45□□□□□ -2.64
NKX2-8O15522 RNU6-590P-201ENST00000365039 107 ntBASIC-1.46□□□□□ -2.64
NKX2-8O15522 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.46□□□□□ -2.64
NKX2-8O15522 RNU6-79P-201ENST00000362511 107 ntBASIC-1.47□□□□□ -2.64
NKX2-8O15522 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.47□□□□□ -2.64
NKX2-8O15522 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.48□□□□□ -2.65
NKX2-8O15522 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.48□□□□□ -2.65
NKX2-8O15522 RNA5SP93-201ENST00000362525 114 ntBASIC-1.49□□□□□ -2.65
NKX2-8O15522 RNU6-974P-201ENST00000384099 108 ntBASIC-1.49□□□□□ -2.65
NKX2-8O15522 RNU6-400P-201ENST00000391173 106 ntBASIC-1.49□□□□□ -2.65
NKX2-8O15522 RNU4-88P-201ENST00000411220 86 ntBASIC-1.49□□□□□ -2.65
NKX2-8O15522 AC125388.1-201ENST00000459631 156 ntBASIC-1.49□□□□□ -2.65
NKX2-8O15522 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.51□□□□□ -2.65
NKX2-8O15522 RNU6-194P-201ENST00000363862 105 ntBASIC-1.51□□□□□ -2.65
NKX2-8O15522 MIR548AM-201ENST00000584298 74 ntBASIC-1.52□□□□□ -2.65
NKX2-8O15522 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.53□□□□□ -2.65
NKX2-8O15522 SNORD54-201ENST00000459159 67 ntBASIC-1.53□□□□□ -2.65
NKX2-8O15522 RNU6-695P-201ENST00000391157 104 ntBASIC-1.54□□□□□ -2.66
NKX2-8O15522 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.54□□□□□ -2.66
NKX2-8O15522 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.54□□□□□ -2.66
NKX2-8O15522 AC120024.2-201ENST00000576526 175 ntBASIC-1.55□□□□□ -2.66
NKX2-8O15522 MIR3123-201ENST00000583417 75 ntBASIC-1.55□□□□□ -2.66
NKX2-8O15522 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.55□□□□□ -2.66
NKX2-8O15522 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.57□□□□□ -2.66
NKX2-8O15522 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.57□□□□□ -2.66
NKX2-8O15522 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.57□□□□□ -2.66
NKX2-8O15522 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.57□□□□□ -2.66
NKX2-8O15522 RNU6-841P-201ENST00000383872 107 ntBASIC-1.58□□□□□ -2.66
NKX2-8O15522 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.58□□□□□ -2.66
NKX2-8O15522 SNORD45.2-201ENST00000363552 72 ntBASIC-1.59□□□□□ -2.66
NKX2-8O15522 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.6□□□□□ -2.67
NKX2-8O15522 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.62□□□□□ -2.67
NKX2-8O15522 RNU6-563P-201ENST00000364872 108 ntBASIC-1.62□□□□□ -2.67
NKX2-8O15522 RNY3P8-201ENST00000411366 126 ntBASIC-1.62□□□□□ -2.67
NKX2-8O15522 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.63□□□□□ -2.67
NKX2-8O15522 AL451105.1-201ENST00000450005 189 ntBASIC-1.64□□□□□ -2.67
NKX2-8O15522 MIR4748-201ENST00000578076 82 ntBASIC-1.64□□□□□ -2.67
NKX2-8O15522 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.66□□□□□ -2.68
NKX2-8O15522 AC139453.2-201ENST00000487255 133 ntBASIC-1.66□□□□□ -2.68
NKX2-8O15522 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.66□□□□□ -2.68
NKX2-8O15522 RNU6-419P-201ENST00000517030 63 ntBASIC-1.66□□□□□ -2.68
NKX2-8O15522 MIR548W-201ENST00000581970 74 ntBASIC-1.66□□□□□ -2.68
NKX2-8O15522 RNU6-446P-201ENST00000362827 106 ntBASIC-1.67□□□□□ -2.68
NKX2-8O15522 RNU6-530P-201ENST00000391180 107 ntBASIC-1.68□□□□□ -2.68
NKX2-8O15522 RNY4P7-201ENST00000364600 96 ntBASIC-1.69□□□□□ -2.68
NKX2-8O15522 MIR633-201ENST00000384821 98 ntBASIC-1.69□□□□□ -2.68
NKX2-8O15522 AC013734.1-201ENST00000619329 111 ntBASIC-1.69□□□□□ -2.68
NKX2-8O15522 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.7□□□□□ -2.68
NKX2-8O15522 snoU13.10-201ENST00000459301 103 ntBASIC-1.7□□□□□ -2.68
NKX2-8O15522 MIR202-201ENST00000362219 110 ntBASIC-1.72□□□□□ -2.68
NKX2-8O15522 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.72□□□□□ -2.68
NKX2-8O15522 U6.97-201ENST00000636904 101 ntBASIC-1.72□□□□□ -2.68
NKX2-8O15522 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.73□□□□□ -2.69
NKX2-8O15522 SNORD60-201ENST00000383903 83 ntBASIC-1.73□□□□□ -2.69
NKX2-8O15522 MIR548X-201ENST00000580069 75 ntBASIC-1.74□□□□□ -2.69
NKX2-8O15522 RNU6-230P-201ENST00000362457 104 ntBASIC-1.75□□□□□ -2.69
NKX2-8O15522 RNU6-829P-201ENST00000363700 112 ntBASIC-1.75□□□□□ -2.69
NKX2-8O15522 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.75□□□□□ -2.69
NKX2-8O15522 RNU6-361P-201ENST00000364454 107 ntBASIC-1.76□□□□□ -2.69
NKX2-8O15522 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.76□□□□□ -2.69
NKX2-8O15522 RNY4-201ENST00000516507 96 ntBASIC-1.76□□□□□ -2.69
NKX2-8O15522 SNORA17.4-201ENST00000391287 132 ntBASIC-1.77□□□□□ -2.69
NKX2-8O15522 FTX_4.1-201ENST00000616291 147 ntBASIC-1.77□□□□□ -2.69
NKX2-8O15522 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.78□□□□□ -2.69
NKX2-8O15522 RNU6-141P-201ENST00000410499 105 ntBASIC-1.79□□□□□ -2.7
NKX2-8O15522 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.79□□□□□ -2.7
NKX2-8O15522 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.8□□□□□ -2.7
NKX2-8O15522 MIR4426-201ENST00000640330 63 ntBASIC-1.8□□□□□ -2.7
NKX2-8O15522 SNORD113-4-201ENST00000364802 75 ntBASIC-1.81□□□□□ -2.7
NKX2-8O15522 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.81□□□□□ -2.7
NKX2-8O15522 RNY4P9-201ENST00000363194 97 ntBASIC-1.82□□□□□ -2.7
NKX2-8O15522 AC079150.2-201ENST00000443733 78 ntBASIC-1.82□□□□□ -2.7
NKX2-8O15522 RNU6-499P-201ENST00000365615 107 ntBASIC-1.83□□□□□ -2.7
NKX2-8O15522 SNORD18C-201ENST00000362704 69 ntBASIC-1.84□□□□□ -2.7
NKX2-8O15522 AC097484.2-201ENST00000509147 251 ntBASIC-1.84□□□□□ -2.7
NKX2-8O15522 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.85□□□□□ -2.71
NKX2-8O15522 MIR548N-201ENST00000408742 75 ntBASIC-1.85□□□□□ -2.71
NKX2-8O15522 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.85□□□□□ -2.71
NKX2-8O15522 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.85□□□□□ -2.71
NKX2-8O15522 RNU6-788P-201ENST00000390967 104 ntBASIC-1.86□□□□□ -2.71
NKX2-8O15522 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.87□□□□□ -2.71
NKX2-8O15522 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.87□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms