Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.5□□□□□ -2.97
USP54Q70EL1 RNU6-257P-201ENST00000410238 98 ntBASIC-3.5□□□□□ -2.97
USP54Q70EL1 RNU6-554P-201ENST00000410466 106 ntBASIC-3.5□□□□□ -2.97
USP54Q70EL1 AL353621.2-201ENST00000605340 133 ntBASIC-3.51□□□□□ -2.97
USP54Q70EL1 SNORA63.4-201ENST00000362763 126 ntBASIC-3.52□□□□□ -2.97
USP54Q70EL1 SNORD45A-201ENST00000384512 84 ntBASIC-3.52□□□□□ -2.97
USP54Q70EL1 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.52□□□□□ -2.97
USP54Q70EL1 Y_RNA.219-201ENST00000364232 113 ntBASIC-3.52□□□□□ -2.97
USP54Q70EL1 Y_RNA.290-201ENST00000364879 114 ntBASIC-3.52□□□□□ -2.97
USP54Q70EL1 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.52□□□□□ -2.97
USP54Q70EL1 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.53□□□□□ -2.97
USP54Q70EL1 Y_RNA.489-201ENST00000384410 101 ntBASIC-3.54□□□□□ -2.98
USP54Q70EL1 RNU6-109P-201ENST00000516364 107 ntBASIC-3.54□□□□□ -2.98
USP54Q70EL1 RNU6-184P-201ENST00000516514 107 ntBASIC-3.54□□□□□ -2.98
USP54Q70EL1 AC006160.2-201ENST00000637708 154 ntBASIC-3.54□□□□□ -2.98
USP54Q70EL1 SNORA19-201ENST00000384737 128 ntBASIC-3.55□□□□□ -2.98
USP54Q70EL1 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.55□□□□□ -2.98
USP54Q70EL1 RNU6-92P-201ENST00000605893 104 ntBASIC-3.55□□□□□ -2.98
USP54Q70EL1 MIR7110-201ENST00000612638 86 ntBASIC-3.55□□□□□ -2.98
USP54Q70EL1 RNU6-810P-201ENST00000364001 107 ntBASIC-3.55□□□□□ -2.98
USP54Q70EL1 RNU6-738P-201ENST00000384531 106 ntBASIC-3.55□□□□□ -2.98
USP54Q70EL1 RNU6-200P-201ENST00000364743 107 ntBASIC-3.57□□□□□ -2.98
USP54Q70EL1 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.57□□□□□ -2.98
USP54Q70EL1 RNU6-530P-201ENST00000391180 107 ntBASIC-3.57□□□□□ -2.98
USP54Q70EL1 RNU6-789P-201ENST00000517105 102 ntBASIC-3.57□□□□□ -2.98
USP54Q70EL1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.57□□□□□ -2.98
USP54Q70EL1 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.58□□□□□ -2.98
USP54Q70EL1 MTND5P41-201ENST00000517498 206 ntBASIC-3.59□□□□□ -2.98
USP54Q70EL1 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.59□□□□□ -2.98
USP54Q70EL1 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.6□□□□□ -2.99
USP54Q70EL1 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.6□□□□□ -2.99
USP54Q70EL1 MIR154-201ENST00000385243 84 ntBASIC-3.6□□□□□ -2.99
USP54Q70EL1 RNU6-300P-201ENST00000459080 104 ntBASIC-3.6□□□□□ -2.99
USP54Q70EL1 MIR548BB-201ENST00000626714 66 ntBASIC-3.6□□□□□ -2.99
USP54Q70EL1 RNU6-345P-201ENST00000517001 107 ntBASIC-3.61□□□□□ -2.99
USP54Q70EL1 MIR4484-201ENST00000582855 83 ntBASIC-3.61□□□□□ -2.99
USP54Q70EL1 MIR664A-201ENST00000626086 82 ntBASIC-3.61□□□□□ -2.99
USP54Q70EL1 Y_RNA.193-201ENST00000363979 102 ntBASIC-3.62□□□□□ -2.99
USP54Q70EL1 RNU6-590P-201ENST00000365039 107 ntBASIC-3.63□□□□□ -2.99
USP54Q70EL1 Y_RNA.544-201ENST00000384650 113 ntBASIC-3.63□□□□□ -2.99
USP54Q70EL1 RNU6-68P-201ENST00000516576 104 ntBASIC-3.63□□□□□ -2.99
USP54Q70EL1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-3.63□□□□□ -2.99
USP54Q70EL1 RNU6-267P-201ENST00000516714 103 ntBASIC-3.64□□□□□ -2.99
USP54Q70EL1 SNORD116.2-201ENST00000391251 93 ntBASIC-3.65□□□□□ -2.99
USP54Q70EL1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.65□□□□□ -2.99
USP54Q70EL1 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.66□□□□□ -3
USP54Q70EL1 RNU6-70P-201ENST00000516438 60 ntBASIC-3.66□□□□□ -3
USP54Q70EL1 MIR548AI-201ENST00000579940 88 ntBASIC-3.67□□□□□ -3
USP54Q70EL1 MIR4426-201ENST00000640330 63 ntBASIC-3.67□□□□□ -3
USP54Q70EL1 Y_RNA.218-201ENST00000364218 104 ntBASIC-3.68□□□□□ -3
USP54Q70EL1 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.68□□□□□ -3
USP54Q70EL1 SNORD60.1-201ENST00000362451 73 ntBASIC-3.68□□□□□ -3
USP54Q70EL1 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.68□□□□□ -3
USP54Q70EL1 RNU6-219P-201ENST00000364728 107 ntBASIC-3.68□□□□□ -3
USP54Q70EL1 RNU6-800P-201ENST00000384473 103 ntBASIC-3.68□□□□□ -3
USP54Q70EL1 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.69□□□□□ -3
USP54Q70EL1 SNORD116-24-201ENST00000384549 92 ntBASIC-3.69□□□□□ -3
USP54Q70EL1 SNORA40B-201ENST00000385573 128 ntBASIC-3.69□□□□□ -3
USP54Q70EL1 MIR4801-201ENST00000582704 82 ntBASIC-3.69□□□□□ -3
USP54Q70EL1 RNU6-497P-201ENST00000365316 104 ntBASIC-3.7□□□□□ -3
USP54Q70EL1 RNU6-895P-201ENST00000384125 103 ntBASIC-3.7□□□□□ -3
USP54Q70EL1 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.71□□□□□ -3
USP54Q70EL1 RNU6-196P-201ENST00000384315 107 ntBASIC-3.71□□□□□ -3
USP54Q70EL1 RNU6-379P-201ENST00000363813 104 ntBASIC-3.72□□□□□ -3.01
USP54Q70EL1 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.73□□□□□ -3.01
USP54Q70EL1 RNU7-200P-201ENST00000516105 62 ntBASIC-3.73□□□□□ -3.01
USP54Q70EL1 RNU6-231P-201ENST00000517122 103 ntBASIC-3.74□□□□□ -3.01
USP54Q70EL1 MIR4503-201ENST00000582187 83 ntBASIC-3.74□□□□□ -3.01
USP54Q70EL1 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.76□□□□□ -3.01
USP54Q70EL1 Y_RNA.604-201ENST00000410574 102 ntBASIC-3.76□□□□□ -3.01
USP54Q70EL1 AL451105.1-201ENST00000450005 189 ntBASIC-3.76□□□□□ -3.01
USP54Q70EL1 AL359920.1-201ENST00000618332 176 ntBASIC-3.76□□□□□ -3.01
USP54Q70EL1 RNU6-315P-201ENST00000362666 107 ntBASIC-3.78□□□□□ -3.01
USP54Q70EL1 RNU6-797P-201ENST00000363101 109 ntBASIC-3.78□□□□□ -3.01
USP54Q70EL1 MIR1254-1-201ENST00000408257 97 ntBASIC-3.78□□□□□ -3.01
USP54Q70EL1 RNU7-119P-201ENST00000459279 63 ntBASIC-3.78□□□□□ -3.01
USP54Q70EL1 SNORA40.13-201ENST00000516379 120 ntBASIC-3.79□□□□□ -3.02
USP54Q70EL1 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-3.79□□□□□ -3.02
USP54Q70EL1 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.8□□□□□ -3.02
USP54Q70EL1 SNORA25.5-201ENST00000363782 126 ntBASIC-3.81□□□□□ -3.02
USP54Q70EL1 RNU6-907P-201ENST00000390924 102 ntBASIC-3.81□□□□□ -3.02
USP54Q70EL1 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.81□□□□□ -3.02
USP54Q70EL1 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.82□□□□□ -3.02
USP54Q70EL1 RNU6-388P-201ENST00000517012 105 ntBASIC-3.82□□□□□ -3.02
USP54Q70EL1 RNU6-389P-201ENST00000517048 105 ntBASIC-3.82□□□□□ -3.02
USP54Q70EL1 RNU6-255P-201ENST00000516957 105 ntBASIC-3.83□□□□□ -3.02
USP54Q70EL1 AC062037.1-201ENST00000605302 128 ntBASIC-3.84□□□□□ -3.02
USP54Q70EL1 AL117351.2-201ENST00000513571 157 ntBASIC-3.84□□□□□ -3.02
USP54Q70EL1 RNU6-886P-201ENST00000384319 105 ntBASIC-3.85□□□□□ -3.03
USP54Q70EL1 RNU6-419P-201ENST00000517030 63 ntBASIC-3.85□□□□□ -3.03
USP54Q70EL1 RNU6-822P-201ENST00000362707 106 ntBASIC-3.86□□□□□ -3.03
USP54Q70EL1 RNU6-675P-201ENST00000384236 104 ntBASIC-3.86□□□□□ -3.03
USP54Q70EL1 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.86□□□□□ -3.03
USP54Q70EL1 RNU6-867P-201ENST00000364956 107 ntBASIC-3.87□□□□□ -3.03
USP54Q70EL1 SNORD116-14-201ENST00000383894 92 ntBASIC-3.87□□□□□ -3.03
USP54Q70EL1 SNORD116-17-201ENST00000383929 92 ntBASIC-3.87□□□□□ -3.03
USP54Q70EL1 SNORD116-15-201ENST00000384445 92 ntBASIC-3.87□□□□□ -3.03
USP54Q70EL1 SNORD116-19-201ENST00000384729 92 ntBASIC-3.87□□□□□ -3.03
USP54Q70EL1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.87□□□□□ -3.03
USP54Q70EL1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-3.87□□□□□ -3.03
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms