Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNU6-184P-201ENST00000516514 107 ntBASIC-4.5□□□□□ -3.13
HIST1H1AQ02539 Y_RNA.720-201ENST00000517166 92 ntBASIC-4.5□□□□□ -3.13
HIST1H1AQ02539 Y_RNA.290-201ENST00000364879 114 ntBASIC-4.51□□□□□ -3.13
HIST1H1AQ02539 Y_RNA.663-201ENST00000516043 101 ntBASIC-4.51□□□□□ -3.13
HIST1H1AQ02539 Y_RNA.702-201ENST00000516843 96 ntBASIC-4.51□□□□□ -3.13
HIST1H1AQ02539 Y_RNA.818-201ENST00000618813 71 ntBASIC-4.51□□□□□ -3.13
HIST1H1AQ02539 Y_RNA.460-201ENST00000384255 102 ntBASIC-4.52□□□□□ -3.13
HIST1H1AQ02539 SNORD45.2-201ENST00000363552 72 ntBASIC-4.53□□□□□ -3.13
HIST1H1AQ02539 Y_RNA.657-201ENST00000515983 102 ntBASIC-4.53□□□□□ -3.13
HIST1H1AQ02539 RNU6-92P-201ENST00000605893 104 ntBASIC-4.53□□□□□ -3.13
HIST1H1AQ02539 Y_RNA.620-201ENST00000411009 88 ntBASIC-4.54□□□□□ -3.14
HIST1H1AQ02539 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-4.54□□□□□ -3.14
HIST1H1AQ02539 RNU6-737P-201ENST00000365370 107 ntBASIC-4.55□□□□□ -3.14
HIST1H1AQ02539 RNU6-804P-201ENST00000384286 107 ntBASIC-4.55□□□□□ -3.14
HIST1H1AQ02539 Y_RNA.604-201ENST00000410574 102 ntBASIC-4.55□□□□□ -3.14
HIST1H1AQ02539 RNU6-231P-201ENST00000517122 103 ntBASIC-4.55□□□□□ -3.14
HIST1H1AQ02539 SNORA40-201ENST00000388090 126 ntBASIC-4.56□□□□□ -3.14
HIST1H1AQ02539 RNU6-380P-201ENST00000410207 107 ntBASIC-4.56□□□□□ -3.14
HIST1H1AQ02539 Y_RNA.149-201ENST00000363558 117 ntBASIC-4.57□□□□□ -3.14
HIST1H1AQ02539 SNORD116.2-201ENST00000391251 93 ntBASIC-4.57□□□□□ -3.14
HIST1H1AQ02539 RNU6-1169P-201ENST00000363537 103 ntBASIC-4.58□□□□□ -3.14
HIST1H1AQ02539 AC062037.2-201ENST00000610137 73 ntBASIC-4.58□□□□□ -3.14
HIST1H1AQ02539 MIR664A-201ENST00000626086 82 ntBASIC-4.58□□□□□ -3.14
HIST1H1AQ02539 SNORD116-21-201ENST00000384507 92 ntBASIC-4.59□□□□□ -3.14
HIST1H1AQ02539 Y_RNA.619-201ENST00000410951 90 ntBASIC-4.59□□□□□ -3.14
HIST1H1AQ02539 AL117187.1-201ENST00000555482 181 ntBASIC-4.59□□□□□ -3.14
HIST1H1AQ02539 SNORD116-24-201ENST00000384549 92 ntBASIC-4.6□□□□□ -3.15
HIST1H1AQ02539 SNORA40B-201ENST00000385573 128 ntBASIC-4.61□□□□□ -3.15
HIST1H1AQ02539 TMSB4XP3-201ENST00000445144 114 ntBASIC-4.61□□□□□ -3.15
HIST1H1AQ02539 MIR548BB-201ENST00000626714 66 ntBASIC-4.61□□□□□ -3.15
HIST1H1AQ02539 SNORD60.1-201ENST00000362451 73 ntBASIC-4.62□□□□□ -3.15
HIST1H1AQ02539 RNU6-497P-201ENST00000365316 104 ntBASIC-4.62□□□□□ -3.15
HIST1H1AQ02539 SNORA19-201ENST00000384737 128 ntBASIC-4.62□□□□□ -3.15
HIST1H1AQ02539 RNU6-542P-201ENST00000516405 103 ntBASIC-4.62□□□□□ -3.15
HIST1H1AQ02539 MIR548AI-201ENST00000579940 88 ntBASIC-4.62□□□□□ -3.15
HIST1H1AQ02539 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-4.63□□□□□ -3.15
HIST1H1AQ02539 AL451105.1-201ENST00000450005 189 ntBASIC-4.63□□□□□ -3.15
HIST1H1AQ02539 SNORD116-22-201ENST00000384430 92 ntBASIC-4.64□□□□□ -3.15
HIST1H1AQ02539 AC004792.1-201ENST00000614523 137 ntBASIC-4.64□□□□□ -3.15
HIST1H1AQ02539 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-4.64□□□□□ -3.15
HIST1H1AQ02539 RNU6-219P-201ENST00000364728 107 ntBASIC-4.66□□□□□ -3.16
HIST1H1AQ02539 RNU6-257P-201ENST00000410238 98 ntBASIC-4.66□□□□□ -3.16
HIST1H1AQ02539 RNU6-895P-201ENST00000384125 103 ntBASIC-4.67□□□□□ -3.16
HIST1H1AQ02539 Y_RNA.422-201ENST00000384054 114 ntBASIC-4.7□□□□□ -3.16
HIST1H1AQ02539 RNU6-1241P-201ENST00000384536 107 ntBASIC-4.7□□□□□ -3.16
HIST1H1AQ02539 MTCYBP6-201ENST00000441810 138 ntBASIC-4.7□□□□□ -3.16
HIST1H1AQ02539 RNU6-267P-201ENST00000516714 103 ntBASIC-4.7□□□□□ -3.16
HIST1H1AQ02539 Y_RNA.17-201ENST00000362433 111 ntBASIC-4.72□□□□□ -3.17
HIST1H1AQ02539 Y_RNA.611-201ENST00000410682 108 ntBASIC-4.72□□□□□ -3.17
HIST1H1AQ02539 MTND5P41-201ENST00000517498 206 ntBASIC-4.72□□□□□ -3.17
HIST1H1AQ02539 RNU6-196P-201ENST00000384315 107 ntBASIC-4.73□□□□□ -3.17
HIST1H1AQ02539 SNORD115-45-201ENST00000391078 81 ntBASIC-4.74□□□□□ -3.17
HIST1H1AQ02539 SNORA40.16-201ENST00000517238 121 ntBASIC-4.74□□□□□ -3.17
HIST1H1AQ02539 MIR154-201ENST00000385243 84 ntBASIC-4.75□□□□□ -3.17
HIST1H1AQ02539 RNU6-822P-201ENST00000362707 106 ntBASIC-4.77□□□□□ -3.17
HIST1H1AQ02539 MIR2052-201ENST00000636055 55 ntBASIC-4.77□□□□□ -3.17
HIST1H1AQ02539 Y_RNA.544-201ENST00000384650 113 ntBASIC-4.78□□□□□ -3.17
HIST1H1AQ02539 MIR1302-3-201ENST00000408128 138 ntBASIC-4.78□□□□□ -3.17
HIST1H1AQ02539 Y_RNA.343-201ENST00000365354 112 ntBASIC-4.8□□□□□ -3.18
HIST1H1AQ02539 RNU6-1160P-201ENST00000384546 104 ntBASIC-4.8□□□□□ -3.18
HIST1H1AQ02539 MIR548S-201ENST00000581352 82 ntBASIC-4.8□□□□□ -3.18
HIST1H1AQ02539 AC006160.2-201ENST00000637708 154 ntBASIC-4.8□□□□□ -3.18
HIST1H1AQ02539 RNU6-315P-201ENST00000362666 107 ntBASIC-4.81□□□□□ -3.18
HIST1H1AQ02539 SNORA63-201ENST00000363450 132 ntBASIC-4.81□□□□□ -3.18
HIST1H1AQ02539 MTCYBP9-201ENST00000431021 303 ntBASIC-4.81□□□□□ -3.18
HIST1H1AQ02539 RNU6-1161P-201ENST00000516176 102 ntBASIC-4.81□□□□□ -3.18
HIST1H1AQ02539 RNU6-200P-201ENST00000364743 107 ntBASIC-4.82□□□□□ -3.18
HIST1H1AQ02539 RNU6-742P-201ENST00000365289 107 ntBASIC-4.82□□□□□ -3.18
HIST1H1AQ02539 Y_RNA.535-201ENST00000384612 99 ntBASIC-4.82□□□□□ -3.18
HIST1H1AQ02539 Y_RNA.137-201ENST00000363455 112 ntBASIC-4.83□□□□□ -3.18
HIST1H1AQ02539 RNU6-854P-201ENST00000364036 107 ntBASIC-4.83□□□□□ -3.18
HIST1H1AQ02539 RNU6-1124P-201ENST00000384169 107 ntBASIC-4.83□□□□□ -3.18
HIST1H1AQ02539 RNU7-119P-201ENST00000459279 63 ntBASIC-4.83□□□□□ -3.18
HIST1H1AQ02539 AC044792.1-201ENST00000593294 196 ntBASIC-4.83□□□□□ -3.18
HIST1H1AQ02539 RNU6-797P-201ENST00000363101 109 ntBASIC-4.84□□□□□ -3.18
HIST1H1AQ02539 RNU6-70P-201ENST00000516438 60 ntBASIC-4.84□□□□□ -3.18
HIST1H1AQ02539 AC008737.2-201ENST00000599446 118 ntBASIC-4.84□□□□□ -3.18
HIST1H1AQ02539 MIR568-201ENST00000385036 95 ntBASIC-4.85□□□□□ -3.19
HIST1H1AQ02539 Y_RNA.43-201ENST00000362670 111 ntBASIC-4.87□□□□□ -3.19
HIST1H1AQ02539 Y_RNA.218-201ENST00000364218 104 ntBASIC-4.88□□□□□ -3.19
HIST1H1AQ02539 AC062037.1-201ENST00000605302 128 ntBASIC-4.88□□□□□ -3.19
HIST1H1AQ02539 Y_RNA.382-201ENST00000365672 114 ntBASIC-4.89□□□□□ -3.19
HIST1H1AQ02539 AC139453.2-201ENST00000487255 133 ntBASIC-4.89□□□□□ -3.19
HIST1H1AQ02539 MIR656-201ENST00000385224 78 ntBASIC-4.9□□□□□ -3.19
HIST1H1AQ02539 MIR124-1-201ENST00000385275 85 ntBASIC-4.91□□□□□ -3.2
HIST1H1AQ02539 AL353621.2-201ENST00000605340 133 ntBASIC-4.91□□□□□ -3.2
HIST1H1AQ02539 RNU6-122P-201ENST00000516818 107 ntBASIC-4.92□□□□□ -3.2
HIST1H1AQ02539 RNU6-1015P-201ENST00000517121 99 ntBASIC-4.94□□□□□ -3.2
HIST1H1AQ02539 Y_RNA.489-201ENST00000384410 101 ntBASIC-4.95□□□□□ -3.2
HIST1H1AQ02539 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.95□□□□□ -3.2
HIST1H1AQ02539 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-4.95□□□□□ -3.2
HIST1H1AQ02539 Y_RNA.607-201ENST00000410597 98 ntBASIC-4.95□□□□□ -3.2
HIST1H1AQ02539 RNU6-419P-201ENST00000517030 63 ntBASIC-4.95□□□□□ -3.2
HIST1H1AQ02539 MALAT1.1-201ENST00000618249 95 ntBASIC-4.95□□□□□ -3.2
HIST1H1AQ02539 RNU6-665P-201ENST00000384639 107 ntBASIC-4.96□□□□□ -3.2
HIST1H1AQ02539 RNU7-200P-201ENST00000516105 62 ntBASIC-4.96□□□□□ -3.2
HIST1H1AQ02539 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-4.96□□□□□ -3.2
HIST1H1AQ02539 RNU6-675P-201ENST00000384236 104 ntBASIC-4.97□□□□□ -3.21
HIST1H1AQ02539 Y_RNA.520-201ENST00000384556 102 ntBASIC-4.97□□□□□ -3.21
HIST1H1AQ02539 Y_RNA.273-201ENST00000364703 102 ntBASIC-4.98□□□□□ -3.21
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms