Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MIR4484-201ENST00000582855 83 ntBASIC-5.06□□□□□ -3.22
CKS1BP61024 RNU6-380P-201ENST00000410207 107 ntBASIC-5.07□□□□□ -3.22
CKS1BP61024 RNU6-426P-201ENST00000516464 97 ntBASIC-5.07□□□□□ -3.22
CKS1BP61024 SNORD45.2-201ENST00000363552 72 ntBASIC-5.08□□□□□ -3.22
CKS1BP61024 Y_RNA.520-201ENST00000384556 102 ntBASIC-5.08□□□□□ -3.22
CKS1BP61024 Y_RNA.149-201ENST00000363558 117 ntBASIC-5.09□□□□□ -3.22
CKS1BP61024 Y_RNA.320-201ENST00000365144 102 ntBASIC-5.09□□□□□ -3.22
CKS1BP61024 RNU6-810P-201ENST00000364001 107 ntBASIC-5.1□□□□□ -3.23
CKS1BP61024 RNU6-1296P-201ENST00000383879 107 ntBASIC-5.11□□□□□ -3.23
CKS1BP61024 Y_RNA.219-201ENST00000364232 113 ntBASIC-5.12□□□□□ -3.23
CKS1BP61024 SNORA40-201ENST00000388090 126 ntBASIC-5.12□□□□□ -3.23
CKS1BP61024 Y_RNA.290-201ENST00000364879 114 ntBASIC-5.13□□□□□ -3.23
CKS1BP61024 Y_RNA.620-201ENST00000411009 88 ntBASIC-5.13□□□□□ -3.23
CKS1BP61024 AL117187.1-201ENST00000555482 181 ntBASIC-5.13□□□□□ -3.23
CKS1BP61024 RNU6-92P-201ENST00000605893 104 ntBASIC-5.13□□□□□ -3.23
CKS1BP61024 AC062037.2-201ENST00000610137 73 ntBASIC-5.13□□□□□ -3.23
CKS1BP61024 RNU6-109P-201ENST00000516364 107 ntBASIC-5.16□□□□□ -3.24
CKS1BP61024 RNU6-184P-201ENST00000516514 107 ntBASIC-5.16□□□□□ -3.24
CKS1BP61024 RNU6-804P-201ENST00000384286 107 ntBASIC-5.17□□□□□ -3.24
CKS1BP61024 SNORD115-45-201ENST00000391078 81 ntBASIC-5.17□□□□□ -3.24
CKS1BP61024 RNU6-231P-201ENST00000517122 103 ntBASIC-5.17□□□□□ -3.24
CKS1BP61024 AP001318.4-201ENST00000616637 121 ntBASIC-5.17□□□□□ -3.24
CKS1BP61024 SNORD116-21-201ENST00000384507 92 ntBASIC-5.18□□□□□ -3.24
CKS1BP61024 TMSB4XP3-201ENST00000445144 114 ntBASIC-5.19□□□□□ -3.24
CKS1BP61024 RNU6-665P-201ENST00000384639 107 ntBASIC-5.2□□□□□ -3.24
CKS1BP61024 Y_RNA.422-201ENST00000384054 114 ntBASIC-5.21□□□□□ -3.24
CKS1BP61024 RNU6-542P-201ENST00000516405 103 ntBASIC-5.21□□□□□ -3.24
CKS1BP61024 RNU6-1169P-201ENST00000363537 103 ntBASIC-5.22□□□□□ -3.25
CKS1BP61024 RNU6-497P-201ENST00000365316 104 ntBASIC-5.22□□□□□ -3.25
CKS1BP61024 SNORA40B-201ENST00000385573 128 ntBASIC-5.22□□□□□ -3.25
CKS1BP61024 SNORD116.2-201ENST00000391251 93 ntBASIC-5.22□□□□□ -3.25
CKS1BP61024 SNORD116-22-201ENST00000384430 92 ntBASIC-5.23□□□□□ -3.25
CKS1BP61024 Y_RNA.619-201ENST00000410951 90 ntBASIC-5.23□□□□□ -3.25
CKS1BP61024 AL451105.1-201ENST00000450005 189 ntBASIC-5.23□□□□□ -3.25
CKS1BP61024 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-5.23□□□□□ -3.25
CKS1BP61024 MIR548BB-201ENST00000626714 66 ntBASIC-5.23□□□□□ -3.25
CKS1BP61024 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-5.23□□□□□ -3.25
CKS1BP61024 RNU6-1161P-201ENST00000516176 102 ntBASIC-5.25□□□□□ -3.25
CKS1BP61024 MIR548AI-201ENST00000579940 88 ntBASIC-5.25□□□□□ -3.25
CKS1BP61024 SNORD116-24-201ENST00000384549 92 ntBASIC-5.26□□□□□ -3.25
CKS1BP61024 SNORA19-201ENST00000384737 128 ntBASIC-5.26□□□□□ -3.25
CKS1BP61024 SNORD60.1-201ENST00000362451 73 ntBASIC-5.27□□□□□ -3.25
CKS1BP61024 Y_RNA.137-201ENST00000363455 112 ntBASIC-5.27□□□□□ -3.25
CKS1BP61024 MTCYBP6-201ENST00000441810 138 ntBASIC-5.27□□□□□ -3.25
CKS1BP61024 RNU6-219P-201ENST00000364728 107 ntBASIC-5.28□□□□□ -3.25
CKS1BP61024 RNU6-895P-201ENST00000384125 103 ntBASIC-5.28□□□□□ -3.25
CKS1BP61024 RNU6-257P-201ENST00000410238 98 ntBASIC-5.28□□□□□ -3.25
CKS1BP61024 MIR664A-201ENST00000626086 82 ntBASIC-5.28□□□□□ -3.25
CKS1BP61024 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-5.29□□□□□ -3.26
CKS1BP61024 AC004792.1-201ENST00000614523 137 ntBASIC-5.29□□□□□ -3.26
CKS1BP61024 MIR1302-3-201ENST00000408128 138 ntBASIC-5.3□□□□□ -3.26
CKS1BP61024 RNU6-822P-201ENST00000362707 106 ntBASIC-5.33□□□□□ -3.26
CKS1BP61024 RNU6-1241P-201ENST00000384536 107 ntBASIC-5.33□□□□□ -3.26
CKS1BP61024 MIR2052-201ENST00000636055 55 ntBASIC-5.33□□□□□ -3.26
CKS1BP61024 Y_RNA.544-201ENST00000384650 113 ntBASIC-5.34□□□□□ -3.26
CKS1BP61024 RNU6-854P-201ENST00000364036 107 ntBASIC-5.36□□□□□ -3.27
CKS1BP61024 RNU6-1124P-201ENST00000384169 107 ntBASIC-5.36□□□□□ -3.27
CKS1BP61024 MIR548S-201ENST00000581352 82 ntBASIC-5.36□□□□□ -3.27
CKS1BP61024 Y_RNA.17-201ENST00000362433 111 ntBASIC-5.37□□□□□ -3.27
CKS1BP61024 Y_RNA.343-201ENST00000365354 112 ntBASIC-5.37□□□□□ -3.27
CKS1BP61024 RNU6-1160P-201ENST00000384546 104 ntBASIC-5.37□□□□□ -3.27
CKS1BP61024 MIR154-201ENST00000385243 84 ntBASIC-5.37□□□□□ -3.27
CKS1BP61024 Y_RNA.611-201ENST00000410682 108 ntBASIC-5.37□□□□□ -3.27
CKS1BP61024 RNU6-196P-201ENST00000384315 107 ntBASIC-5.38□□□□□ -3.27
CKS1BP61024 MTCYBP9-201ENST00000431021 303 ntBASIC-5.38□□□□□ -3.27
CKS1BP61024 MTND5P41-201ENST00000517498 206 ntBASIC-5.38□□□□□ -3.27
CKS1BP61024 AC044792.1-201ENST00000593294 196 ntBASIC-5.38□□□□□ -3.27
CKS1BP61024 Y_RNA.535-201ENST00000384612 99 ntBASIC-5.39□□□□□ -3.27
CKS1BP61024 RNU6-267P-201ENST00000516714 103 ntBASIC-5.39□□□□□ -3.27
CKS1BP61024 RNU6-315P-201ENST00000362666 107 ntBASIC-5.4□□□□□ -3.27
CKS1BP61024 MIR124-1-201ENST00000385275 85 ntBASIC-5.4□□□□□ -3.27
CKS1BP61024 RNU6-200P-201ENST00000364743 107 ntBASIC-5.41□□□□□ -3.28
CKS1BP61024 SNORA40.16-201ENST00000517238 121 ntBASIC-5.41□□□□□ -3.28
CKS1BP61024 AC006160.2-201ENST00000637708 154 ntBASIC-5.41□□□□□ -3.28
CKS1BP61024 RNU7-119P-201ENST00000459279 63 ntBASIC-5.43□□□□□ -3.28
CKS1BP61024 AC008737.2-201ENST00000599446 118 ntBASIC-5.45□□□□□ -3.28
CKS1BP61024 MIR548AH-201ENST00000637109 76 ntBASIC-5.45□□□□□ -3.28
CKS1BP61024 SNORA63-201ENST00000363450 132 ntBASIC-5.46□□□□□ -3.28
CKS1BP61024 RNU6-797P-201ENST00000363101 109 ntBASIC-5.47□□□□□ -3.29
CKS1BP61024 RNU6-742P-201ENST00000365289 107 ntBASIC-5.47□□□□□ -3.29
CKS1BP61024 Y_RNA.43-201ENST00000362670 111 ntBASIC-5.48□□□□□ -3.29
CKS1BP61024 AL353621.2-201ENST00000605340 133 ntBASIC-5.49□□□□□ -3.29
CKS1BP61024 AC062037.1-201ENST00000605302 128 ntBASIC-5.5□□□□□ -3.29
CKS1BP61024 Y_RNA.218-201ENST00000364218 104 ntBASIC-5.51□□□□□ -3.29
CKS1BP61024 MIR568-201ENST00000385036 95 ntBASIC-5.51□□□□□ -3.29
CKS1BP61024 RNU6-70P-201ENST00000516438 60 ntBASIC-5.51□□□□□ -3.29
CKS1BP61024 Y_RNA.489-201ENST00000384410 101 ntBASIC-5.52□□□□□ -3.29
CKS1BP61024 MIR656-201ENST00000385224 78 ntBASIC-5.52□□□□□ -3.29
CKS1BP61024 Y_RNA.273-201ENST00000364703 102 ntBASIC-5.55□□□□□ -3.3
CKS1BP61024 Y_RNA.607-201ENST00000410597 98 ntBASIC-5.55□□□□□ -3.3
CKS1BP61024 AC139453.2-201ENST00000487255 133 ntBASIC-5.55□□□□□ -3.3
CKS1BP61024 RNU6-122P-201ENST00000516818 107 ntBASIC-5.55□□□□□ -3.3
CKS1BP61024 RNU6-1128P-201ENST00000362825 109 ntBASIC-5.57□□□□□ -3.3
CKS1BP61024 Y_RNA.193-201ENST00000363979 102 ntBASIC-5.57□□□□□ -3.3
CKS1BP61024 Y_RNA.382-201ENST00000365672 114 ntBASIC-5.57□□□□□ -3.3
CKS1BP61024 RNU6-1340P-201ENST00000384438 107 ntBASIC-5.58□□□□□ -3.3
CKS1BP61024 RNU6-675P-201ENST00000384236 104 ntBASIC-5.59□□□□□ -3.3
CKS1BP61024 RNU7-200P-201ENST00000516105 62 ntBASIC-5.59□□□□□ -3.3
CKS1BP61024 MALAT1.1-201ENST00000618249 95 ntBASIC-5.59□□□□□ -3.3
CKS1BP61024 MIR606-201ENST00000384851 96 ntBASIC-5.6□□□□□ -3.31
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms