Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 RNU6-231P-201ENST00000517122 103 ntBASIC-0.58□□□□□ -2.5
CBX4O00257 MIR5683-201ENST00000636514 76 ntBASIC-0.58□□□□□ -2.5
CBX4O00257 MIR520D-201ENST00000385002 87 ntBASIC-0.6□□□□□ -2.51
CBX4O00257 MIR579-201ENST00000385221 98 ntBASIC-0.6□□□□□ -2.51
CBX4O00257 RNU7-151P-201ENST00000516930 53 ntBASIC-0.6□□□□□ -2.51
CBX4O00257 MIR466-201ENST00000580653 84 ntBASIC-0.6□□□□□ -2.51
CBX4O00257 RNU6-590P-201ENST00000365039 107 ntBASIC-0.61□□□□□ -2.51
CBX4O00257 RNU6-10P-201ENST00000384036 107 ntBASIC-0.61□□□□□ -2.51
CBX4O00257 MIR7110-201ENST00000612638 86 ntBASIC-0.61□□□□□ -2.51
CBX4O00257 MIR7978-201ENST00000636158 59 ntBASIC-0.61□□□□□ -2.51
CBX4O00257 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
CBX4O00257 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.62□□□□□ -2.51
CBX4O00257 MIR3170-201ENST00000582699 77 ntBASIC-0.62□□□□□ -2.51
CBX4O00257 MIR6738-201ENST00000619620 64 ntBASIC-0.62□□□□□ -2.51
CBX4O00257 MIR382-201ENST00000637119 76 ntBASIC-0.62□□□□□ -2.51
CBX4O00257 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.63□□□□□ -2.51
CBX4O00257 MIR507-201ENST00000385234 94 ntBASIC-0.63□□□□□ -2.51
CBX4O00257 AC139453.2-201ENST00000487255 133 ntBASIC-0.63□□□□□ -2.51
CBX4O00257 MIR3938-201ENST00000582157 103 ntBASIC-0.63□□□□□ -2.51
CBX4O00257 RNU6-995P-201ENST00000391244 107 ntBASIC-0.64□□□□□ -2.51
CBX4O00257 SNORD116.2-201ENST00000391251 93 ntBASIC-0.64□□□□□ -2.51
CBX4O00257 AL500527.2-201ENST00000454105 95 ntBASIC-0.64□□□□□ -2.51
CBX4O00257 MIR4490-201ENST00000582647 84 ntBASIC-0.64□□□□□ -2.51
CBX4O00257 RNU6-810P-201ENST00000364001 107 ntBASIC-0.65□□□□□ -2.51
CBX4O00257 MIR125B1-201ENST00000385236 88 ntBASIC-0.65□□□□□ -2.51
CBX4O00257 SNORA40.16-201ENST00000517238 121 ntBASIC-0.65□□□□□ -2.51
CBX4O00257 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.65□□□□□ -2.51
CBX4O00257 RNA5SP26-201ENST00000362406 119 ntBASIC-0.66□□□□□ -2.52
CBX4O00257 SNORD114-3-201ENST00000364969 75 ntBASIC-0.66□□□□□ -2.52
CBX4O00257 RNU6-608P-201ENST00000383927 104 ntBASIC-0.66□□□□□ -2.52
CBX4O00257 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.66□□□□□ -2.52
CBX4O00257 RPL35AP4-201ENST00000412007 102 ntBASIC-0.66□□□□□ -2.52
CBX4O00257 MIR378F-201ENST00000578143 78 ntBASIC-0.66□□□□□ -2.52
CBX4O00257 RNU6-258P-201ENST00000390884 101 ntBASIC-0.67□□□□□ -2.52
CBX4O00257 RNU7-119P-201ENST00000459279 63 ntBASIC-0.67□□□□□ -2.52
CBX4O00257 AC125388.1-201ENST00000459631 156 ntBASIC-0.67□□□□□ -2.52
CBX4O00257 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.67□□□□□ -2.52
CBX4O00257 snoU83B.1-201ENST00000517136 88 ntBASIC-0.67□□□□□ -2.52
CBX4O00257 RNU6-247P-201ENST00000362636 107 ntBASIC-0.68□□□□□ -2.52
CBX4O00257 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.68□□□□□ -2.52
CBX4O00257 SNORA40B-201ENST00000385573 128 ntBASIC-0.68□□□□□ -2.52
CBX4O00257 RNU7-160P-201ENST00000516660 62 ntBASIC-0.68□□□□□ -2.52
CBX4O00257 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.69□□□□□ -2.52
CBX4O00257 MIR29B1-201ENST00000385015 81 ntBASIC-0.69□□□□□ -2.52
CBX4O00257 MIR4324-201ENST00000584846 72 ntBASIC-0.69□□□□□ -2.52
CBX4O00257 MIR6818-201ENST00000621576 65 ntBASIC-0.69□□□□□ -2.52
CBX4O00257 RNU6-520P-201ENST00000384717 104 ntBASIC-0.7□□□□□ -2.52
CBX4O00257 MIR196A1-201ENST00000388006 70 ntBASIC-0.71□□□□□ -2.52
CBX4O00257 SNORD63.2-201ENST00000516303 64 ntBASIC-0.71□□□□□ -2.52
CBX4O00257 RNU6-446P-201ENST00000362827 106 ntBASIC-0.72□□□□□ -2.52
CBX4O00257 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.72□□□□□ -2.52
CBX4O00257 AC090616.4-201ENST00000448026 115 ntBASIC-0.72□□□□□ -2.52
CBX4O00257 SCARNA17-201ENST00000516183 144 ntBASIC-0.72□□□□□ -2.52
CBX4O00257 RNU6-974P-201ENST00000384099 108 ntBASIC-0.73□□□□□ -2.53
CBX4O00257 RNU7-134P-201ENST00000458997 64 ntBASIC-0.73□□□□□ -2.53
CBX4O00257 RNU6-828P-201ENST00000364876 107 ntBASIC-0.74□□□□□ -2.53
CBX4O00257 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.74□□□□□ -2.53
CBX4O00257 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.74□□□□□ -2.53
CBX4O00257 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.74□□□□□ -2.53
CBX4O00257 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.74□□□□□ -2.53
CBX4O00257 MIR4499-201ENST00000584834 69 ntBASIC-0.74□□□□□ -2.53
CBX4O00257 uc_338.19-201ENST00000616808 99 ntBASIC-0.74□□□□□ -2.53
CBX4O00257 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.75□□□□□ -2.53
CBX4O00257 MIR633-201ENST00000384821 98 ntBASIC-0.75□□□□□ -2.53
CBX4O00257 MIR365A-201ENST00000362260 87 ntBASIC-0.76□□□□□ -2.53
CBX4O00257 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.76□□□□□ -2.53
CBX4O00257 SNORD83B-201ENST00000386745 93 ntBASIC-0.77□□□□□ -2.53
CBX4O00257 RNA5SP461-201ENST00000516451 104 ntBASIC-0.77□□□□□ -2.53
CBX4O00257 SNORA27.2-201ENST00000363365 126 ntBASIC-0.78□□□□□ -2.53
CBX4O00257 RNU6-829P-201ENST00000363700 112 ntBASIC-0.78□□□□□ -2.53
CBX4O00257 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.79□□□□□ -2.54
CBX4O00257 RNU6-788P-201ENST00000390967 104 ntBASIC-0.79□□□□□ -2.54
CBX4O00257 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.8□□□□□ -2.54
CBX4O00257 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.8□□□□□ -2.54
CBX4O00257 RNU6-164P-201ENST00000364604 103 ntBASIC-0.8□□□□□ -2.54
CBX4O00257 SNORD113-4-201ENST00000364802 75 ntBASIC-0.8□□□□□ -2.54
CBX4O00257 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.81□□□□□ -2.54
CBX4O00257 AC079150.2-201ENST00000443733 78 ntBASIC-0.81□□□□□ -2.54
CBX4O00257 RNU6-576P-201ENST00000390854 102 ntBASIC-0.82□□□□□ -2.54
CBX4O00257 MIR23C-201ENST00000579846 100 ntBASIC-0.83□□□□□ -2.54
CBX4O00257 MIR4441-201ENST00000582623 100 ntBASIC-0.83□□□□□ -2.54
CBX4O00257 MIR1285-2-201ENST00000408311 88 ntBASIC-0.84□□□□□ -2.54
CBX4O00257 AL451105.1-201ENST00000450005 189 ntBASIC-0.84□□□□□ -2.54
CBX4O00257 RNU6-419P-201ENST00000517030 63 ntBASIC-0.84□□□□□ -2.54
CBX4O00257 RNY3P8-201ENST00000411366 126 ntBASIC-0.85□□□□□ -2.55
CBX4O00257 AC018880.2-201ENST00000414265 201 ntBASIC-0.85□□□□□ -2.55
CBX4O00257 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.85□□□□□ -2.55
CBX4O00257 AC091912.2-201ENST00000624798 167 ntBASIC-0.85□□□□□ -2.55
CBX4O00257 RNU6-563P-201ENST00000364872 108 ntBASIC-0.86□□□□□ -2.55
CBX4O00257 RNU6-499P-201ENST00000365615 107 ntBASIC-0.86□□□□□ -2.55
CBX4O00257 RNA5SP180-201ENST00000516181 101 ntBASIC-0.86□□□□□ -2.55
CBX4O00257 MIR3115-201ENST00000577915 68 ntBASIC-0.86□□□□□ -2.55
CBX4O00257 MIR6874-201ENST00000635894 71 ntBASIC-0.86□□□□□ -2.55
CBX4O00257 RNY4P27-201ENST00000363341 96 ntBASIC-0.87□□□□□ -2.55
CBX4O00257 AC120024.2-201ENST00000576526 175 ntBASIC-0.87□□□□□ -2.55
CBX4O00257 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.88□□□□□ -2.55
CBX4O00257 MIR548X-201ENST00000580069 75 ntBASIC-0.88□□□□□ -2.55
CBX4O00257 RNU6-79P-201ENST00000362511 107 ntBASIC-0.89□□□□□ -2.55
CBX4O00257 RNU6-530P-201ENST00000391180 107 ntBASIC-0.89□□□□□ -2.55
CBX4O00257 AC013734.1-201ENST00000619329 111 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms