Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.01□□□□□ -2.73
NUP50Q9UKX7 RNU6-630P-201ENST00000391258 106 ntBASIC-2.01□□□□□ -2.73
NUP50Q9UKX7 MIR548BB-201ENST00000626714 66 ntBASIC-2.01□□□□□ -2.73
NUP50Q9UKX7 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.02□□□□□ -2.73
NUP50Q9UKX7 RNU6-81P-201ENST00000365608 104 ntBASIC-2.02□□□□□ -2.73
NUP50Q9UKX7 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.02□□□□□ -2.73
NUP50Q9UKX7 RNU6-267P-201ENST00000516714 103 ntBASIC-2.02□□□□□ -2.73
NUP50Q9UKX7 MIR450A1-201ENST00000362262 91 ntBASIC-2.03□□□□□ -2.73
NUP50Q9UKX7 RNU6-598P-201ENST00000364017 105 ntBASIC-2.03□□□□□ -2.73
NUP50Q9UKX7 RNU6-608P-201ENST00000383927 104 ntBASIC-2.03□□□□□ -2.73
NUP50Q9UKX7 AL031737.1-201ENST00000450125 223 ntBASIC-2.03□□□□□ -2.73
NUP50Q9UKX7 RNU6-980P-201ENST00000516925 103 ntBASIC-2.03□□□□□ -2.73
NUP50Q9UKX7 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.03□□□□□ -2.73
NUP50Q9UKX7 MALAT1.1-201ENST00000618249 95 ntBASIC-2.03□□□□□ -2.73
NUP50Q9UKX7 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.04□□□□□ -2.74
NUP50Q9UKX7 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.04□□□□□ -2.74
NUP50Q9UKX7 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.04□□□□□ -2.74
NUP50Q9UKX7 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.05□□□□□ -2.74
NUP50Q9UKX7 MIR520D-201ENST00000385002 87 ntBASIC-2.05□□□□□ -2.74
NUP50Q9UKX7 RNU6-129P-201ENST00000391022 107 ntBASIC-2.05□□□□□ -2.74
NUP50Q9UKX7 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.06□□□□□ -2.74
NUP50Q9UKX7 MIR548V-201ENST00000584165 80 ntBASIC-2.06□□□□□ -2.74
NUP50Q9UKX7 AP001318.4-201ENST00000616637 121 ntBASIC-2.06□□□□□ -2.74
NUP50Q9UKX7 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.07□□□□□ -2.74
NUP50Q9UKX7 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.07□□□□□ -2.74
NUP50Q9UKX7 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.08□□□□□ -2.74
NUP50Q9UKX7 SNORA40.13-201ENST00000516379 120 ntBASIC-2.08□□□□□ -2.74
NUP50Q9UKX7 U2.18-201ENST00000622185 84 ntBASIC-2.08□□□□□ -2.74
NUP50Q9UKX7 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.09□□□□□ -2.74
NUP50Q9UKX7 MIR4484-201ENST00000582855 83 ntBASIC-2.09□□□□□ -2.74
NUP50Q9UKX7 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.1□□□□□ -2.75
NUP50Q9UKX7 MTND4LP1-201ENST00000446263 157 ntBASIC-2.1□□□□□ -2.75
NUP50Q9UKX7 RNY4-201ENST00000516507 96 ntBASIC-2.1□□□□□ -2.75
NUP50Q9UKX7 MIR1297-201ENST00000637311 77 ntBASIC-2.1□□□□□ -2.75
NUP50Q9UKX7 MIR630-201ENST00000384957 97 ntBASIC-2.11□□□□□ -2.75
NUP50Q9UKX7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.11□□□□□ -2.75
NUP50Q9UKX7 RNU6-22P-201ENST00000384355 107 ntBASIC-2.12□□□□□ -2.75
NUP50Q9UKX7 MIR3139-201ENST00000579145 76 ntBASIC-2.12□□□□□ -2.75
NUP50Q9UKX7 RNA5SP215-201ENST00000363440 122 ntBASIC-2.13□□□□□ -2.75
NUP50Q9UKX7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.13□□□□□ -2.75
NUP50Q9UKX7 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.13□□□□□ -2.75
NUP50Q9UKX7 MIR23C-201ENST00000579846 100 ntBASIC-2.13□□□□□ -2.75
NUP50Q9UKX7 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.14□□□□□ -2.75
NUP50Q9UKX7 SNORD116-16-201ENST00000384533 92 ntBASIC-2.14□□□□□ -2.75
NUP50Q9UKX7 SNORD113-2-201ENST00000391082 72 ntBASIC-2.14□□□□□ -2.75
NUP50Q9UKX7 RNA5SP405-201ENST00000363059 114 ntBASIC-2.15□□□□□ -2.75
NUP50Q9UKX7 RNU6-668P-201ENST00000364180 107 ntBASIC-2.15□□□□□ -2.75
NUP50Q9UKX7 RNU6-675P-201ENST00000384236 104 ntBASIC-2.15□□□□□ -2.75
NUP50Q9UKX7 RNY4P18-201ENST00000391107 89 ntBASIC-2.15□□□□□ -2.75
NUP50Q9UKX7 RNU6-695P-201ENST00000391157 104 ntBASIC-2.15□□□□□ -2.75
NUP50Q9UKX7 MIR3170-201ENST00000582699 77 ntBASIC-2.15□□□□□ -2.75
NUP50Q9UKX7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.15□□□□□ -2.75
NUP50Q9UKX7 MIR8053-201ENST00000613344 75 ntBASIC-2.15□□□□□ -2.75
NUP50Q9UKX7 AC006160.2-201ENST00000637708 154 ntBASIC-2.15□□□□□ -2.75
NUP50Q9UKX7 SNORD113.1-201ENST00000363280 73 ntBASIC-2.16□□□□□ -2.76
NUP50Q9UKX7 MIR488-201ENST00000365739 83 ntBASIC-2.16□□□□□ -2.76
NUP50Q9UKX7 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.17□□□□□ -2.76
NUP50Q9UKX7 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.17□□□□□ -2.76
NUP50Q9UKX7 MIR548AA1-201ENST00000384971 97 ntBASIC-2.17□□□□□ -2.76
NUP50Q9UKX7 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.17□□□□□ -2.76
NUP50Q9UKX7 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.17□□□□□ -2.76
NUP50Q9UKX7 MT-TM-201ENST00000387377 68 ntBASIC-2.18□□□□□ -2.76
NUP50Q9UKX7 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.18□□□□□ -2.76
NUP50Q9UKX7 RNU6-380P-201ENST00000410207 107 ntBASIC-2.18□□□□□ -2.76
NUP50Q9UKX7 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.19□□□□□ -2.76
NUP50Q9UKX7 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.19□□□□□ -2.76
NUP50Q9UKX7 RNU6-841P-201ENST00000383872 107 ntBASIC-2.19□□□□□ -2.76
NUP50Q9UKX7 SNORD45A-201ENST00000384512 84 ntBASIC-2.2□□□□□ -2.76
NUP50Q9UKX7 RNU6-640P-201ENST00000363693 105 ntBASIC-2.21□□□□□ -2.76
NUP50Q9UKX7 RNA5SP173-201ENST00000364857 136 ntBASIC-2.21□□□□□ -2.76
NUP50Q9UKX7 SNORA41B-201ENST00000384785 128 ntBASIC-2.21□□□□□ -2.76
NUP50Q9UKX7 RNU6-844P-201ENST00000517175 102 ntBASIC-2.21□□□□□ -2.76
NUP50Q9UKX7 MIR3123-201ENST00000583417 75 ntBASIC-2.21□□□□□ -2.76
NUP50Q9UKX7 SNORD1B-201ENST00000363091 84 ntBASIC-2.22□□□□□ -2.76
NUP50Q9UKX7 RNU6-313P-201ENST00000516317 112 ntBASIC-2.22□□□□□ -2.76
NUP50Q9UKX7 AC120024.2-201ENST00000576526 175 ntBASIC-2.22□□□□□ -2.76
NUP50Q9UKX7 MIR548AM-201ENST00000584298 74 ntBASIC-2.22□□□□□ -2.76
NUP50Q9UKX7 SNORA63.4-201ENST00000362763 126 ntBASIC-2.23□□□□□ -2.77
NUP50Q9UKX7 RNU6-755P-201ENST00000364400 103 ntBASIC-2.23□□□□□ -2.77
NUP50Q9UKX7 MIR664A-201ENST00000626086 82 ntBASIC-2.23□□□□□ -2.77
NUP50Q9UKX7 RNU6-315P-201ENST00000362666 107 ntBASIC-2.24□□□□□ -2.77
NUP50Q9UKX7 MIR3668-201ENST00000582138 75 ntBASIC-2.24□□□□□ -2.77
NUP50Q9UKX7 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.24□□□□□ -2.77
NUP50Q9UKX7 RNU6-247P-201ENST00000362636 107 ntBASIC-2.25□□□□□ -2.77
NUP50Q9UKX7 RNU6-563P-201ENST00000364872 108 ntBASIC-2.25□□□□□ -2.77
NUP50Q9UKX7 RNU6-258P-201ENST00000390884 101 ntBASIC-2.25□□□□□ -2.77
NUP50Q9UKX7 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.25□□□□□ -2.77
NUP50Q9UKX7 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.25□□□□□ -2.77
NUP50Q9UKX7 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.26□□□□□ -2.77
NUP50Q9UKX7 RNU6-194P-201ENST00000363862 105 ntBASIC-2.27□□□□□ -2.77
NUP50Q9UKX7 RNU6-32P-201ENST00000383948 107 ntBASIC-2.27□□□□□ -2.77
NUP50Q9UKX7 RNU6-13P-201ENST00000384248 107 ntBASIC-2.27□□□□□ -2.77
NUP50Q9UKX7 RNU6-12P-201ENST00000384604 107 ntBASIC-2.27□□□□□ -2.77
NUP50Q9UKX7 RNU6-41P-201ENST00000384741 107 ntBASIC-2.27□□□□□ -2.77
NUP50Q9UKX7 RNU4-88P-201ENST00000411220 86 ntBASIC-2.27□□□□□ -2.77
NUP50Q9UKX7 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.27□□□□□ -2.77
NUP50Q9UKX7 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.27□□□□□ -2.77
NUP50Q9UKX7 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.28□□□□□ -2.77
NUP50Q9UKX7 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.28□□□□□ -2.77
NUP50Q9UKX7 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.28□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms