Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU6-70P-201ENST00000516438 60 ntBASIC-0.92□□□□□ -2.56
CCDC88CQ9P219 MIR3170-201ENST00000582699 77 ntBASIC-0.92□□□□□ -2.56
CCDC88CQ9P219 MIR6874-201ENST00000635894 71 ntBASIC-0.92□□□□□ -2.56
CCDC88CQ9P219 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.93□□□□□ -2.56
CCDC88CQ9P219 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.93□□□□□ -2.56
CCDC88CQ9P219 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.93□□□□□ -2.56
CCDC88CQ9P219 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.93□□□□□ -2.56
CCDC88CQ9P219 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.93□□□□□ -2.56
CCDC88CQ9P219 SNORD20-201ENST00000384550 80 ntBASIC-0.93□□□□□ -2.56
CCDC88CQ9P219 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.93□□□□□ -2.56
CCDC88CQ9P219 SNORA41B-201ENST00000384785 128 ntBASIC-0.93□□□□□ -2.56
CCDC88CQ9P219 RNU6-219P-201ENST00000364728 107 ntBASIC-0.94□□□□□ -2.56
CCDC88CQ9P219 RNU6-542P-201ENST00000516405 103 ntBASIC-0.94□□□□□ -2.56
CCDC88CQ9P219 RNY1P1-201ENST00000364372 112 ntBASIC-0.94□□□□□ -2.56
CCDC88CQ9P219 RNU6-81P-201ENST00000365608 104 ntBASIC-0.94□□□□□ -2.56
CCDC88CQ9P219 RNU6-557P-201ENST00000516842 110 ntBASIC-0.94□□□□□ -2.56
CCDC88CQ9P219 MIR3910-1-201ENST00000580936 111 ntBASIC-0.94□□□□□ -2.56
CCDC88CQ9P219 RNY4P27-201ENST00000363341 96 ntBASIC-0.95□□□□□ -2.56
CCDC88CQ9P219 SNORD116-16-201ENST00000384533 92 ntBASIC-0.95□□□□□ -2.56
CCDC88CQ9P219 MIR520D-201ENST00000385002 87 ntBASIC-0.95□□□□□ -2.56
CCDC88CQ9P219 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.95□□□□□ -2.56
CCDC88CQ9P219 MIR548BB-201ENST00000626714 66 ntBASIC-0.95□□□□□ -2.56
CCDC88CQ9P219 SNORD1B-201ENST00000363091 84 ntBASIC-0.96□□□□□ -2.56
CCDC88CQ9P219 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.96□□□□□ -2.56
CCDC88CQ9P219 RNU6-563P-201ENST00000364872 108 ntBASIC-0.96□□□□□ -2.56
CCDC88CQ9P219 AL606753.1-201ENST00000427435 87 ntBASIC-0.96□□□□□ -2.56
CCDC88CQ9P219 MALAT1.1-201ENST00000618249 95 ntBASIC-0.96□□□□□ -2.56
CCDC88CQ9P219 SNORA63.4-201ENST00000362763 126 ntBASIC-0.96□□□□□ -2.56
CCDC88CQ9P219 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.96□□□□□ -2.56
CCDC88CQ9P219 RNU6-732P-201ENST00000516033 103 ntBASIC-0.96□□□□□ -2.56
CCDC88CQ9P219 RNU6-974P-201ENST00000384099 108 ntBASIC-0.97□□□□□ -2.56
CCDC88CQ9P219 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.98□□□□□ -2.57
CCDC88CQ9P219 MIR548C-201ENST00000384815 97 ntBASIC-0.98□□□□□ -2.57
CCDC88CQ9P219 RNU7-171P-201ENST00000459581 62 ntBASIC-0.98□□□□□ -2.57
CCDC88CQ9P219 RNU6-686P-201ENST00000364839 107 ntBASIC-0.99□□□□□ -2.57
CCDC88CQ9P219 MT-TR-201ENST00000387439 65 ntBASIC-0.99□□□□□ -2.57
CCDC88CQ9P219 MIR429-201ENST00000362106 83 ntBASIC-0.99□□□□□ -2.57
CCDC88CQ9P219 RNU6-669P-201ENST00000365575 107 ntBASIC-0.99□□□□□ -2.57
CCDC88CQ9P219 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.99□□□□□ -2.57
CCDC88CQ9P219 RNU6-247P-201ENST00000362636 107 ntBASIC-1□□□□□ -2.57
CCDC88CQ9P219 RNU6-228P-201ENST00000362700 106 ntBASIC-1□□□□□ -2.57
CCDC88CQ9P219 RNU6-147P-201ENST00000383983 107 ntBASIC-1□□□□□ -2.57
CCDC88CQ9P219 SNORD19B.1-201ENST00000630615 80 ntBASIC-1□□□□□ -2.57
CCDC88CQ9P219 MIR7978-201ENST00000636158 59 ntBASIC-1□□□□□ -2.57
CCDC88CQ9P219 RNU6-44P-201ENST00000384045 107 ntBASIC-1.01□□□□□ -2.57
CCDC88CQ9P219 RNA5SP89-201ENST00000410300 108 ntBASIC-1.01□□□□□ -2.57
CCDC88CQ9P219 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.01□□□□□ -2.57
CCDC88CQ9P219 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.01□□□□□ -2.57
CCDC88CQ9P219 RNU6-640P-201ENST00000363693 105 ntBASIC-1.01□□□□□ -2.57
CCDC88CQ9P219 RNU6-119P-201ENST00000364882 107 ntBASIC-1.01□□□□□ -2.57
CCDC88CQ9P219 MIR488-201ENST00000365739 83 ntBASIC-1.01□□□□□ -2.57
CCDC88CQ9P219 RNU6-49P-201ENST00000384256 107 ntBASIC-1.01□□□□□ -2.57
CCDC88CQ9P219 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.02□□□□□ -2.57
CCDC88CQ9P219 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.02□□□□□ -2.57
CCDC88CQ9P219 MIR548H1-201ENST00000408610 102 ntBASIC-1.02□□□□□ -2.57
CCDC88CQ9P219 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.02□□□□□ -2.57
CCDC88CQ9P219 RNU6-919P-201ENST00000516731 104 ntBASIC-1.02□□□□□ -2.57
CCDC88CQ9P219 RNU6-844P-201ENST00000517175 102 ntBASIC-1.02□□□□□ -2.57
CCDC88CQ9P219 AC013734.1-201ENST00000619329 111 ntBASIC-1.02□□□□□ -2.57
CCDC88CQ9P219 RNU6-834P-201ENST00000362367 110 ntBASIC-1.03□□□□□ -2.57
CCDC88CQ9P219 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.03□□□□□ -2.57
CCDC88CQ9P219 RNU6-668P-201ENST00000364180 107 ntBASIC-1.03□□□□□ -2.57
CCDC88CQ9P219 MIR23C-201ENST00000579846 100 ntBASIC-1.03□□□□□ -2.57
CCDC88CQ9P219 U6.97-201ENST00000636904 101 ntBASIC-1.03□□□□□ -2.57
CCDC88CQ9P219 SNORA25.5-201ENST00000363782 126 ntBASIC-1.03□□□□□ -2.57
CCDC88CQ9P219 RNU6-598P-201ENST00000364017 105 ntBASIC-1.03□□□□□ -2.57
CCDC88CQ9P219 RNU6-787P-201ENST00000384032 107 ntBASIC-1.03□□□□□ -2.57
CCDC88CQ9P219 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.03□□□□□ -2.57
CCDC88CQ9P219 MIR579-201ENST00000385221 98 ntBASIC-1.03□□□□□ -2.57
CCDC88CQ9P219 RNU6-604P-201ENST00000390917 100 ntBASIC-1.03□□□□□ -2.57
CCDC88CQ9P219 RNU6-129P-201ENST00000391022 107 ntBASIC-1.03□□□□□ -2.57
CCDC88CQ9P219 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.04□□□□□ -2.58
CCDC88CQ9P219 SNORD60.1-201ENST00000362451 73 ntBASIC-1.05□□□□□ -2.58
CCDC88CQ9P219 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.05□□□□□ -2.58
CCDC88CQ9P219 RNU6-400P-201ENST00000391173 106 ntBASIC-1.05□□□□□ -2.58
CCDC88CQ9P219 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.05□□□□□ -2.58
CCDC88CQ9P219 RNU6-402P-201ENST00000410678 103 ntBASIC-1.05□□□□□ -2.58
CCDC88CQ9P219 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.05□□□□□ -2.58
CCDC88CQ9P219 SNORD115-31-201ENST00000365318 82 ntBASIC-1.05□□□□□ -2.58
CCDC88CQ9P219 MIR487B-201ENST00000385021 84 ntBASIC-1.05□□□□□ -2.58
CCDC88CQ9P219 MIR450A2-201ENST00000385022 100 ntBASIC-1.05□□□□□ -2.58
CCDC88CQ9P219 snoU13.10-201ENST00000459301 103 ntBASIC-1.05□□□□□ -2.58
CCDC88CQ9P219 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.05□□□□□ -2.58
CCDC88CQ9P219 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.05□□□□□ -2.58
CCDC88CQ9P219 RNU6-315P-201ENST00000362666 107 ntBASIC-1.06□□□□□ -2.58
CCDC88CQ9P219 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.06□□□□□ -2.58
CCDC88CQ9P219 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.06□□□□□ -2.58
CCDC88CQ9P219 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.06□□□□□ -2.58
CCDC88CQ9P219 RNU6-258P-201ENST00000390884 101 ntBASIC-1.06□□□□□ -2.58
CCDC88CQ9P219 MIR4484-201ENST00000582855 83 ntBASIC-1.06□□□□□ -2.58
CCDC88CQ9P219 MIR3123-201ENST00000583417 75 ntBASIC-1.06□□□□□ -2.58
CCDC88CQ9P219 MIR548AM-201ENST00000584298 74 ntBASIC-1.06□□□□□ -2.58
CCDC88CQ9P219 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.06□□□□□ -2.58
CCDC88CQ9P219 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.07□□□□□ -2.58
CCDC88CQ9P219 MIR1255A-201ENST00000408338 113 ntBASIC-1.07□□□□□ -2.58
CCDC88CQ9P219 MIR548W-201ENST00000581970 74 ntBASIC-1.07□□□□□ -2.58
CCDC88CQ9P219 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.07□□□□□ -2.58
CCDC88CQ9P219 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.08□□□□□ -2.58
CCDC88CQ9P219 SNORD116-24-201ENST00000384549 92 ntBASIC-1.08□□□□□ -2.58
CCDC88CQ9P219 RNU6-540P-201ENST00000384622 101 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms