Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 SNORD54-201ENST00000459159 67 ntBASIC-1.15□□□□□ -2.59
SMPD3Q9NY59 snoU13.10-201ENST00000459301 103 ntBASIC-1.15□□□□□ -2.59
SMPD3Q9NY59 RNU6-841P-201ENST00000383872 107 ntBASIC-1.16□□□□□ -2.6
SMPD3Q9NY59 MTATP8P2-201ENST00000435212 202 ntBASIC-1.16□□□□□ -2.6
SMPD3Q9NY59 MIR2052-201ENST00000636055 55 ntBASIC-1.16□□□□□ -2.6
SMPD3Q9NY59 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.17□□□□□ -2.6
SMPD3Q9NY59 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.17□□□□□ -2.6
SMPD3Q9NY59 RNU6-696P-201ENST00000390834 107 ntBASIC-1.17□□□□□ -2.6
SMPD3Q9NY59 RNU6-587P-201ENST00000391282 106 ntBASIC-1.17□□□□□ -2.6
SMPD3Q9NY59 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.17□□□□□ -2.6
SMPD3Q9NY59 MIR3170-201ENST00000582699 77 ntBASIC-1.17□□□□□ -2.6
SMPD3Q9NY59 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.17□□□□□ -2.6
SMPD3Q9NY59 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.18□□□□□ -2.6
SMPD3Q9NY59 RNU6-330P-201ENST00000363015 107 ntBASIC-1.18□□□□□ -2.6
SMPD3Q9NY59 RNU6-645P-201ENST00000364649 106 ntBASIC-1.18□□□□□ -2.6
SMPD3Q9NY59 RNU6-974P-201ENST00000384099 108 ntBASIC-1.18□□□□□ -2.6
SMPD3Q9NY59 MIR581-201ENST00000384895 96 ntBASIC-1.18□□□□□ -2.6
SMPD3Q9NY59 RNU7-174P-201ENST00000516248 59 ntBASIC-1.18□□□□□ -2.6
SMPD3Q9NY59 U4.4-201ENST00000620626 117 ntBASIC-1.18□□□□□ -2.6
SMPD3Q9NY59 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.19□□□□□ -2.6
SMPD3Q9NY59 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.19□□□□□ -2.6
SMPD3Q9NY59 RNU6-22P-201ENST00000384355 107 ntBASIC-1.19□□□□□ -2.6
SMPD3Q9NY59 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.19□□□□□ -2.6
SMPD3Q9NY59 MIR548M-201ENST00000408260 86 ntBASIC-1.19□□□□□ -2.6
SMPD3Q9NY59 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.19□□□□□ -2.6
SMPD3Q9NY59 U6.97-201ENST00000636904 101 ntBASIC-1.19□□□□□ -2.6
SMPD3Q9NY59 RNU6-633P-201ENST00000362612 103 ntBASIC-1.2□□□□□ -2.6
SMPD3Q9NY59 MT-TM-201ENST00000387377 68 ntBASIC-1.2□□□□□ -2.6
SMPD3Q9NY59 AL031737.1-201ENST00000450125 223 ntBASIC-1.2□□□□□ -2.6
SMPD3Q9NY59 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.2□□□□□ -2.6
SMPD3Q9NY59 MIR4668-201ENST00000582284 70 ntBASIC-1.2□□□□□ -2.6
SMPD3Q9NY59 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.2□□□□□ -2.6
SMPD3Q9NY59 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.2□□□□□ -2.6
SMPD3Q9NY59 RNU6-624P-201ENST00000363411 107 ntBASIC-1.21□□□□□ -2.6
SMPD3Q9NY59 MT-TR-201ENST00000387439 65 ntBASIC-1.21□□□□□ -2.6
SMPD3Q9NY59 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.21□□□□□ -2.6
SMPD3Q9NY59 RNU6-982P-201ENST00000516216 102 ntBASIC-1.21□□□□□ -2.6
SMPD3Q9NY59 RNU6-807P-201ENST00000516805 107 ntBASIC-1.21□□□□□ -2.6
SMPD3Q9NY59 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.21□□□□□ -2.6
SMPD3Q9NY59 RNU6-194P-201ENST00000363862 105 ntBASIC-1.22□□□□□ -2.6
SMPD3Q9NY59 RNY3P8-201ENST00000411366 126 ntBASIC-1.22□□□□□ -2.6
SMPD3Q9NY59 MIR548C-201ENST00000384815 97 ntBASIC-1.23□□□□□ -2.61
SMPD3Q9NY59 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
SMPD3Q9NY59 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.23□□□□□ -2.61
SMPD3Q9NY59 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.23□□□□□ -2.61
SMPD3Q9NY59 MIR450A1-201ENST00000362262 91 ntBASIC-1.24□□□□□ -2.61
SMPD3Q9NY59 RNU6-497P-201ENST00000365316 104 ntBASIC-1.24□□□□□ -2.61
SMPD3Q9NY59 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.24□□□□□ -2.61
SMPD3Q9NY59 SNORA41B-201ENST00000384785 128 ntBASIC-1.24□□□□□ -2.61
SMPD3Q9NY59 RNU6-313P-201ENST00000516317 112 ntBASIC-1.24□□□□□ -2.61
SMPD3Q9NY59 RNU6-267P-201ENST00000516714 103 ntBASIC-1.24□□□□□ -2.61
SMPD3Q9NY59 RNU6-219P-201ENST00000364728 107 ntBASIC-1.25□□□□□ -2.61
SMPD3Q9NY59 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.25□□□□□ -2.61
SMPD3Q9NY59 AC093729.1-201ENST00000513074 128 ntBASIC-1.25□□□□□ -2.61
SMPD3Q9NY59 MIR4748-201ENST00000578076 82 ntBASIC-1.25□□□□□ -2.61
SMPD3Q9NY59 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.26□□□□□ -2.61
SMPD3Q9NY59 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.26□□□□□ -2.61
SMPD3Q9NY59 SNORD116-22-201ENST00000384430 92 ntBASIC-1.26□□□□□ -2.61
SMPD3Q9NY59 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.26□□□□□ -2.61
SMPD3Q9NY59 MIR630-201ENST00000384957 97 ntBASIC-1.26□□□□□ -2.61
SMPD3Q9NY59 SNORD113-2-201ENST00000391082 72 ntBASIC-1.26□□□□□ -2.61
SMPD3Q9NY59 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.26□□□□□ -2.61
SMPD3Q9NY59 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.26□□□□□ -2.61
SMPD3Q9NY59 MIR579-201ENST00000385221 98 ntBASIC-1.27□□□□□ -2.61
SMPD3Q9NY59 RNU6-604P-201ENST00000390917 100 ntBASIC-1.27□□□□□ -2.61
SMPD3Q9NY59 MIR3675-201ENST00000583661 73 ntBASIC-1.27□□□□□ -2.61
SMPD3Q9NY59 MIR548V-201ENST00000584165 80 ntBASIC-1.27□□□□□ -2.61
SMPD3Q9NY59 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.27□□□□□ -2.61
SMPD3Q9NY59 SNORD1B-201ENST00000363091 84 ntBASIC-1.28□□□□□ -2.61
SMPD3Q9NY59 RNU6-669P-201ENST00000365575 107 ntBASIC-1.28□□□□□ -2.61
SMPD3Q9NY59 SNORA8.1-201ENST00000384250 140 ntBASIC-1.28□□□□□ -2.61
SMPD3Q9NY59 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.28□□□□□ -2.61
SMPD3Q9NY59 RNU6-402P-201ENST00000410678 103 ntBASIC-1.28□□□□□ -2.61
SMPD3Q9NY59 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.28□□□□□ -2.61
SMPD3Q9NY59 AC074348.1-201ENST00000426503 132 ntBASIC-1.28□□□□□ -2.61
SMPD3Q9NY59 SNORA40.13-201ENST00000516379 120 ntBASIC-1.28□□□□□ -2.61
SMPD3Q9NY59 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.28□□□□□ -2.61
SMPD3Q9NY59 RNU7-151P-201ENST00000516930 53 ntBASIC-1.28□□□□□ -2.61
SMPD3Q9NY59 MIR23C-201ENST00000579846 100 ntBASIC-1.28□□□□□ -2.61
SMPD3Q9NY59 MIR7978-201ENST00000636158 59 ntBASIC-1.28□□□□□ -2.61
SMPD3Q9NY59 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.29□□□□□ -2.62
SMPD3Q9NY59 RNU6-141P-201ENST00000410499 105 ntBASIC-1.29□□□□□ -2.62
SMPD3Q9NY59 RNU6-557P-201ENST00000516842 110 ntBASIC-1.29□□□□□ -2.62
SMPD3Q9NY59 RNU6-303P-201ENST00000517091 106 ntBASIC-1.29□□□□□ -2.62
SMPD3Q9NY59 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.29□□□□□ -2.62
SMPD3Q9NY59 AP001318.4-201ENST00000616637 121 ntBASIC-1.29□□□□□ -2.62
SMPD3Q9NY59 MALAT1.1-201ENST00000618249 95 ntBASIC-1.29□□□□□ -2.62
SMPD3Q9NY59 MIR548BB-201ENST00000626714 66 ntBASIC-1.29□□□□□ -2.62
SMPD3Q9NY59 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.3□□□□□ -2.62
SMPD3Q9NY59 RNU6-995P-201ENST00000391244 107 ntBASIC-1.3□□□□□ -2.62
SMPD3Q9NY59 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.3□□□□□ -2.62
SMPD3Q9NY59 RNU6-698P-201ENST00000363523 107 ntBASIC-1.31□□□□□ -2.62
SMPD3Q9NY59 SNORD113-3-201ENST00000364830 72 ntBASIC-1.31□□□□□ -2.62
SMPD3Q9NY59 RNU6-34P-201ENST00000364874 107 ntBASIC-1.31□□□□□ -2.62
SMPD3Q9NY59 MIR548AA1-201ENST00000384971 97 ntBASIC-1.31□□□□□ -2.62
SMPD3Q9NY59 SNORD63.2-201ENST00000516303 64 ntBASIC-1.31□□□□□ -2.62
SMPD3Q9NY59 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.31□□□□□ -2.62
SMPD3Q9NY59 SNORD45.1-201ENST00000363181 77 ntBASIC-1.32□□□□□ -2.62
SMPD3Q9NY59 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.32□□□□□ -2.62
SMPD3Q9NY59 RNY4P18-201ENST00000391107 89 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms