Protein–RNA interactions for Protein: Q9NY46

SCN3A, Sodium channel protein type 3 subunit alpha, humanhuman

Predictions only

Length 2,000 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3AQ9NY46 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.29□□□□□ -2.78
SCN3AQ9NY46 AC006160.2-201ENST00000637708 154 ntBASIC-2.29□□□□□ -2.78
SCN3AQ9NY46 RNU6-755P-201ENST00000364400 103 ntBASIC-2.29□□□□□ -2.78
SCN3AQ9NY46 RNA5SP173-201ENST00000364857 136 ntBASIC-2.29□□□□□ -2.78
SCN3AQ9NY46 MIR590-201ENST00000385008 97 ntBASIC-2.29□□□□□ -2.78
SCN3AQ9NY46 RNU6-327P-201ENST00000516270 127 ntBASIC-2.29□□□□□ -2.78
SCN3AQ9NY46 RNU6-388P-201ENST00000517012 105 ntBASIC-2.29□□□□□ -2.78
SCN3AQ9NY46 RNU6-389P-201ENST00000517048 105 ntBASIC-2.29□□□□□ -2.78
SCN3AQ9NY46 U6.95-201ENST00000636931 70 ntBASIC-2.29□□□□□ -2.78
SCN3AQ9NY46 MIR379-201ENST00000362218 67 ntBASIC-2.3□□□□□ -2.78
SCN3AQ9NY46 SNORA27.2-201ENST00000363365 126 ntBASIC-2.3□□□□□ -2.78
SCN3AQ9NY46 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.3□□□□□ -2.78
SCN3AQ9NY46 MTATP8P2-201ENST00000435212 202 ntBASIC-2.3□□□□□ -2.78
SCN3AQ9NY46 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.3□□□□□ -2.78
SCN3AQ9NY46 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.3□□□□□ -2.78
SCN3AQ9NY46 MT-TG-201ENST00000387429 68 ntBASIC-2.3□□□□□ -2.78
SCN3AQ9NY46 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.3□□□□□ -2.78
SCN3AQ9NY46 SNORA63-201ENST00000363450 132 ntBASIC-2.31□□□□□ -2.78
SCN3AQ9NY46 SNORD116-22-201ENST00000384430 92 ntBASIC-2.31□□□□□ -2.78
SCN3AQ9NY46 AC074348.1-201ENST00000426503 132 ntBASIC-2.31□□□□□ -2.78
SCN3AQ9NY46 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.31□□□□□ -2.78
SCN3AQ9NY46 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.31□□□□□ -2.78
SCN3AQ9NY46 SNORD45.1-201ENST00000363181 77 ntBASIC-2.32□□□□□ -2.78
SCN3AQ9NY46 SNORD60-201ENST00000383903 83 ntBASIC-2.32□□□□□ -2.78
SCN3AQ9NY46 RNU6-804P-201ENST00000384286 107 ntBASIC-2.32□□□□□ -2.78
SCN3AQ9NY46 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.32□□□□□ -2.78
SCN3AQ9NY46 RNY1P1-201ENST00000364372 112 ntBASIC-2.32□□□□□ -2.78
SCN3AQ9NY46 RNU6-649P-201ENST00000384463 107 ntBASIC-2.32□□□□□ -2.78
SCN3AQ9NY46 SNORA19-201ENST00000384737 128 ntBASIC-2.32□□□□□ -2.78
SCN3AQ9NY46 RNU6-987P-201ENST00000384759 104 ntBASIC-2.32□□□□□ -2.78
SCN3AQ9NY46 RNU6-162P-201ENST00000516228 103 ntBASIC-2.32□□□□□ -2.78
SCN3AQ9NY46 RNU6-971P-201ENST00000516920 106 ntBASIC-2.32□□□□□ -2.78
SCN3AQ9NY46 RNU6-766P-201ENST00000362478 107 ntBASIC-2.33□□□□□ -2.78
SCN3AQ9NY46 SNORA41B-201ENST00000384785 128 ntBASIC-2.33□□□□□ -2.78
SCN3AQ9NY46 RNU6-598P-201ENST00000364017 105 ntBASIC-2.34□□□□□ -2.78
SCN3AQ9NY46 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.34□□□□□ -2.78
SCN3AQ9NY46 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.34□□□□□ -2.78
SCN3AQ9NY46 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.34□□□□□ -2.78
SCN3AQ9NY46 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.35□□□□□ -2.79
SCN3AQ9NY46 MIR7978-201ENST00000636158 59 ntBASIC-2.35□□□□□ -2.79
SCN3AQ9NY46 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.35□□□□□ -2.79
SCN3AQ9NY46 MIR548N-201ENST00000408742 75 ntBASIC-2.35□□□□□ -2.79
SCN3AQ9NY46 RNU7-200P-201ENST00000516105 62 ntBASIC-2.35□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.35□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.35□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.35□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.35□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.35□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.36□□□□□ -2.79
SCN3AQ9NY46 RNU6-106P-201ENST00000384405 107 ntBASIC-2.36□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.36□□□□□ -2.79
SCN3AQ9NY46 RNU6-554P-201ENST00000410466 106 ntBASIC-2.36□□□□□ -2.79
SCN3AQ9NY46 RNY3P8-201ENST00000411366 126 ntBASIC-2.36□□□□□ -2.79
SCN3AQ9NY46 SNORD63.2-201ENST00000516303 64 ntBASIC-2.36□□□□□ -2.79
SCN3AQ9NY46 RNU6-523P-201ENST00000516304 54 ntBASIC-2.36□□□□□ -2.79
SCN3AQ9NY46 MIR4668-201ENST00000582284 70 ntBASIC-2.36□□□□□ -2.79
SCN3AQ9NY46 SNORD116-21-201ENST00000384507 92 ntBASIC-2.37□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.37□□□□□ -2.79
SCN3AQ9NY46 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.37□□□□□ -2.79
SCN3AQ9NY46 RNU6-542P-201ENST00000516405 103 ntBASIC-2.37□□□□□ -2.79
SCN3AQ9NY46 RNU6-557P-201ENST00000516842 110 ntBASIC-2.37□□□□□ -2.79
SCN3AQ9NY46 RNU6-196P-201ENST00000384315 107 ntBASIC-2.37□□□□□ -2.79
SCN3AQ9NY46 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.38□□□□□ -2.79
SCN3AQ9NY46 SNORD115-31-201ENST00000365318 82 ntBASIC-2.38□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.39□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.39□□□□□ -2.79
SCN3AQ9NY46 RNU6-604P-201ENST00000390917 100 ntBASIC-2.39□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.4□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.4□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.4□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.4□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.4□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.4□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.4□□□□□ -2.79
SCN3AQ9NY46 RNU6-330P-201ENST00000363015 107 ntBASIC-2.41□□□□□ -2.79
SCN3AQ9NY46 MIR154-201ENST00000385243 84 ntBASIC-2.41□□□□□ -2.79
SCN3AQ9NY46 RNU6-659P-201ENST00000516454 104 ntBASIC-2.41□□□□□ -2.79
SCN3AQ9NY46 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.41□□□□□ -2.8
SCN3AQ9NY46 MIR125B1-201ENST00000385236 88 ntBASIC-2.41□□□□□ -2.8
SCN3AQ9NY46 AP001318.4-201ENST00000616637 121 ntBASIC-2.41□□□□□ -2.8
SCN3AQ9NY46 SNORD45A-201ENST00000384512 84 ntBASIC-2.42□□□□□ -2.8
SCN3AQ9NY46 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.42□□□□□ -2.8
SCN3AQ9NY46 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.42□□□□□ -2.8
SCN3AQ9NY46 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.42□□□□□ -2.8
SCN3AQ9NY46 RNU6-668P-201ENST00000364180 107 ntBASIC-2.42□□□□□ -2.8
SCN3AQ9NY46 AC097484.2-201ENST00000509147 251 ntBASIC-2.42□□□□□ -2.8
SCN3AQ9NY46 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.43□□□□□ -2.8
SCN3AQ9NY46 MIR579-201ENST00000385221 98 ntBASIC-2.44□□□□□ -2.8
SCN3AQ9NY46 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.46□□□□□ -2.8
SCN3AQ9NY46 AC093729.1-201ENST00000513074 128 ntBASIC-2.46□□□□□ -2.8
SCN3AQ9NY46 RNU6-694P-201ENST00000364071 147 ntBASIC-2.46□□□□□ -2.8
SCN3AQ9NY46 RNU6-361P-201ENST00000364454 107 ntBASIC-2.46□□□□□ -2.8
SCN3AQ9NY46 RNU6-974P-201ENST00000384099 108 ntBASIC-2.46□□□□□ -2.8
SCN3AQ9NY46 RNU6-402P-201ENST00000410678 103 ntBASIC-2.46□□□□□ -2.8
SCN3AQ9NY46 RNU6-686P-201ENST00000364839 107 ntBASIC-2.47□□□□□ -2.8
SCN3AQ9NY46 RNU6-141P-201ENST00000410499 105 ntBASIC-2.47□□□□□ -2.8
SCN3AQ9NY46 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.47□□□□□ -2.8
SCN3AQ9NY46 SNORA40.13-201ENST00000516379 120 ntBASIC-2.47□□□□□ -2.81
SCN3AQ9NY46 MIR4503-201ENST00000582187 83 ntBASIC-2.47□□□□□ -2.81
SCN3AQ9NY46 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.48□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms