Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.13□□□□□ -2.59
EXOSC3Q9NQT5 RNU6-215P-201ENST00000365169 102 ntBASIC-1.14□□□□□ -2.59
EXOSC3Q9NQT5 MIR548C-201ENST00000384815 97 ntBASIC-1.14□□□□□ -2.59
EXOSC3Q9NQT5 AC018880.2-201ENST00000414265 201 ntBASIC-1.14□□□□□ -2.59
EXOSC3Q9NQT5 RNU6-557P-201ENST00000516842 110 ntBASIC-1.14□□□□□ -2.59
EXOSC3Q9NQT5 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.14□□□□□ -2.59
EXOSC3Q9NQT5 U2.7-201ENST00000619197 100 ntBASIC-1.14□□□□□ -2.59
EXOSC3Q9NQT5 SNORD114-3-201ENST00000364969 75 ntBASIC-1.15□□□□□ -2.59
EXOSC3Q9NQT5 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.15□□□□□ -2.59
EXOSC3Q9NQT5 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.15□□□□□ -2.59
EXOSC3Q9NQT5 RNU4-88P-201ENST00000411220 86 ntBASIC-1.15□□□□□ -2.59
EXOSC3Q9NQT5 RNU6-919P-201ENST00000516731 104 ntBASIC-1.15□□□□□ -2.59
EXOSC3Q9NQT5 RNU6-303P-201ENST00000517091 106 ntBASIC-1.15□□□□□ -2.59
EXOSC3Q9NQT5 MIR3675-201ENST00000583661 73 ntBASIC-1.15□□□□□ -2.59
EXOSC3Q9NQT5 RNU6-478P-201ENST00000363904 110 ntBASIC-1.16□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-686P-201ENST00000364839 107 ntBASIC-1.16□□□□□ -2.6
EXOSC3Q9NQT5 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.16□□□□□ -2.6
EXOSC3Q9NQT5 SNORA8.1-201ENST00000384250 140 ntBASIC-1.16□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-695P-201ENST00000391157 104 ntBASIC-1.16□□□□□ -2.6
EXOSC3Q9NQT5 MIR3123-201ENST00000583417 75 ntBASIC-1.16□□□□□ -2.6
EXOSC3Q9NQT5 MIR548AM-201ENST00000584298 74 ntBASIC-1.16□□□□□ -2.6
EXOSC3Q9NQT5 RNA5SP331-201ENST00000364986 107 ntBASIC-1.17□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-608P-201ENST00000383927 104 ntBASIC-1.17□□□□□ -2.6
EXOSC3Q9NQT5 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.17□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-844P-201ENST00000517175 102 ntBASIC-1.17□□□□□ -2.6
EXOSC3Q9NQT5 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.17□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-841P-201ENST00000383872 107 ntBASIC-1.18□□□□□ -2.6
EXOSC3Q9NQT5 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.18□□□□□ -2.6
EXOSC3Q9NQT5 MT-TM-201ENST00000387377 68 ntBASIC-1.18□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-129P-201ENST00000391022 107 ntBASIC-1.18□□□□□ -2.6
EXOSC3Q9NQT5 MIR548Q-201ENST00000408404 100 ntBASIC-1.18□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-563P-201ENST00000364872 108 ntBASIC-1.19□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-675P-201ENST00000384236 104 ntBASIC-1.19□□□□□ -2.6
EXOSC3Q9NQT5 MIR520D-201ENST00000385002 87 ntBASIC-1.19□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-604P-201ENST00000390917 100 ntBASIC-1.19□□□□□ -2.6
EXOSC3Q9NQT5 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.19□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-789P-201ENST00000517105 102 ntBASIC-1.19□□□□□ -2.6
EXOSC3Q9NQT5 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.2□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.2□□□□□ -2.6
EXOSC3Q9NQT5 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.2□□□□□ -2.6
EXOSC3Q9NQT5 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.2□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-807P-201ENST00000516805 107 ntBASIC-1.2□□□□□ -2.6
EXOSC3Q9NQT5 MIR4484-201ENST00000582855 83 ntBASIC-1.2□□□□□ -2.6
EXOSC3Q9NQT5 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.2□□□□□ -2.6
EXOSC3Q9NQT5 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.21□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-194P-201ENST00000363862 105 ntBASIC-1.21□□□□□ -2.6
EXOSC3Q9NQT5 SNORD115-31-201ENST00000365318 82 ntBASIC-1.21□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-630P-201ENST00000391258 106 ntBASIC-1.21□□□□□ -2.6
EXOSC3Q9NQT5 AC074348.1-201ENST00000426503 132 ntBASIC-1.21□□□□□ -2.6
EXOSC3Q9NQT5 AC006160.2-201ENST00000637708 154 ntBASIC-1.21□□□□□ -2.6
EXOSC3Q9NQT5 SNORD45.1-201ENST00000363181 77 ntBASIC-1.22□□□□□ -2.6
EXOSC3Q9NQT5 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.22□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-44P-201ENST00000384045 107 ntBASIC-1.22□□□□□ -2.6
EXOSC3Q9NQT5 RNU6-982P-201ENST00000516216 102 ntBASIC-1.23□□□□□ -2.61
EXOSC3Q9NQT5 AC120024.2-201ENST00000576526 175 ntBASIC-1.23□□□□□ -2.61
EXOSC3Q9NQT5 RNU6-119P-201ENST00000364882 107 ntBASIC-1.24□□□□□ -2.61
EXOSC3Q9NQT5 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.24□□□□□ -2.61
EXOSC3Q9NQT5 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.24□□□□□ -2.61
EXOSC3Q9NQT5 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.24□□□□□ -2.61
EXOSC3Q9NQT5 MIR548W-201ENST00000581970 74 ntBASIC-1.24□□□□□ -2.61
EXOSC3Q9NQT5 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.24□□□□□ -2.61
EXOSC3Q9NQT5 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.25□□□□□ -2.61
EXOSC3Q9NQT5 RNU6-406P-201ENST00000516470 107 ntBASIC-1.25□□□□□ -2.61
EXOSC3Q9NQT5 RNA5SP93-201ENST00000362525 114 ntBASIC-1.26□□□□□ -2.61
EXOSC3Q9NQT5 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.26□□□□□ -2.61
EXOSC3Q9NQT5 RNU6-458P-201ENST00000384179 107 ntBASIC-1.26□□□□□ -2.61
EXOSC3Q9NQT5 RNU6-258P-201ENST00000390884 101 ntBASIC-1.26□□□□□ -2.61
EXOSC3Q9NQT5 U6.58-201ENST00000613107 107 ntBASIC-1.26□□□□□ -2.61
EXOSC3Q9NQT5 RNU6-598P-201ENST00000364017 105 ntBASIC-1.27□□□□□ -2.61
EXOSC3Q9NQT5 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.27□□□□□ -2.61
EXOSC3Q9NQT5 RNU6-49P-201ENST00000384256 107 ntBASIC-1.27□□□□□ -2.61
EXOSC3Q9NQT5 RNU6-696P-201ENST00000390834 107 ntBASIC-1.27□□□□□ -2.61
EXOSC3Q9NQT5 MIR1207-201ENST00000408249 87 ntBASIC-1.27□□□□□ -2.61
EXOSC3Q9NQT5 MIR4748-201ENST00000578076 82 ntBASIC-1.27□□□□□ -2.61
EXOSC3Q9NQT5 IGLL4P-201ENST00000614590 133 ntBASIC-1.27□□□□□ -2.61
EXOSC3Q9NQT5 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.28□□□□□ -2.61
EXOSC3Q9NQT5 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
EXOSC3Q9NQT5 RNA5SP89-201ENST00000410300 108 ntBASIC-1.28□□□□□ -2.61
EXOSC3Q9NQT5 snoU13.10-201ENST00000459301 103 ntBASIC-1.28□□□□□ -2.61
EXOSC3Q9NQT5 RNU7-174P-201ENST00000516248 59 ntBASIC-1.28□□□□□ -2.61
EXOSC3Q9NQT5 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.28□□□□□ -2.61
EXOSC3Q9NQT5 MIR548AI-201ENST00000579940 88 ntBASIC-1.28□□□□□ -2.61
EXOSC3Q9NQT5 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.29□□□□□ -2.62
EXOSC3Q9NQT5 RNY1P1-201ENST00000364372 112 ntBASIC-1.29□□□□□ -2.62
EXOSC3Q9NQT5 RNU6-380P-201ENST00000410207 107 ntBASIC-1.29□□□□□ -2.62
EXOSC3Q9NQT5 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.29□□□□□ -2.62
EXOSC3Q9NQT5 SNORD54-201ENST00000459159 67 ntBASIC-1.29□□□□□ -2.62
EXOSC3Q9NQT5 AL627230.5-201ENST00000619807 58 ntBASIC-1.29□□□□□ -2.62
EXOSC3Q9NQT5 MIR1297-201ENST00000637311 77 ntBASIC-1.29□□□□□ -2.62
EXOSC3Q9NQT5 MIR23C-201ENST00000579846 100 ntBASIC-1.3□□□□□ -2.62
EXOSC3Q9NQT5 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.31□□□□□ -2.62
EXOSC3Q9NQT5 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.31□□□□□ -2.62
EXOSC3Q9NQT5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.31□□□□□ -2.62
EXOSC3Q9NQT5 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.31□□□□□ -2.62
EXOSC3Q9NQT5 MIR466-201ENST00000580653 84 ntBASIC-1.31□□□□□ -2.62
EXOSC3Q9NQT5 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.31□□□□□ -2.62
EXOSC3Q9NQT5 AC013734.1-201ENST00000619329 111 ntBASIC-1.31□□□□□ -2.62
EXOSC3Q9NQT5 U2.18-201ENST00000622185 84 ntBASIC-1.31□□□□□ -2.62
EXOSC3Q9NQT5 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.32□□□□□ -2.62
EXOSC3Q9NQT5 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 313.1 ms