Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.65□□□□□ -2.67
CACNA1SQ13698 SNORD113-2-201ENST00000391082 72 ntBASIC-1.66□□□□□ -2.68
CACNA1SQ13698 RNU6-633P-201ENST00000362612 103 ntBASIC-1.67□□□□□ -2.68
CACNA1SQ13698 SNORD18C-201ENST00000362704 69 ntBASIC-1.67□□□□□ -2.68
CACNA1SQ13698 RNY4P9-201ENST00000363194 97 ntBASIC-1.67□□□□□ -2.68
CACNA1SQ13698 SNORD116-16-201ENST00000384533 92 ntBASIC-1.67□□□□□ -2.68
CACNA1SQ13698 RNU7-153P-201ENST00000516455 62 ntBASIC-1.67□□□□□ -2.68
CACNA1SQ13698 RNU7-151P-201ENST00000516930 53 ntBASIC-1.67□□□□□ -2.68
CACNA1SQ13698 RNU6-645P-201ENST00000364649 106 ntBASIC-1.67□□□□□ -2.68
CACNA1SQ13698 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.67□□□□□ -2.68
CACNA1SQ13698 SNORD116-21-201ENST00000384507 92 ntBASIC-1.67□□□□□ -2.68
CACNA1SQ13698 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.67□□□□□ -2.68
CACNA1SQ13698 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.67□□□□□ -2.68
CACNA1SQ13698 MTATP8P2-201ENST00000435212 202 ntBASIC-1.67□□□□□ -2.68
CACNA1SQ13698 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.67□□□□□ -2.68
CACNA1SQ13698 U2.18-201ENST00000622185 84 ntBASIC-1.67□□□□□ -2.68
CACNA1SQ13698 MIR590-201ENST00000385008 97 ntBASIC-1.68□□□□□ -2.68
CACNA1SQ13698 MIR8053-201ENST00000613344 75 ntBASIC-1.68□□□□□ -2.68
CACNA1SQ13698 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.69□□□□□ -2.68
CACNA1SQ13698 SNORA27.2-201ENST00000363365 126 ntBASIC-1.69□□□□□ -2.68
CACNA1SQ13698 MIR630-201ENST00000384957 97 ntBASIC-1.69□□□□□ -2.68
CACNA1SQ13698 AC013734.1-201ENST00000619329 111 ntBASIC-1.69□□□□□ -2.68
CACNA1SQ13698 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.69□□□□□ -2.68
CACNA1SQ13698 AC006160.2-201ENST00000637708 154 ntBASIC-1.69□□□□□ -2.68
CACNA1SQ13698 RNU6-303P-201ENST00000517091 106 ntBASIC-1.7□□□□□ -2.68
CACNA1SQ13698 RNU6-995P-201ENST00000391244 107 ntBASIC-1.71□□□□□ -2.68
CACNA1SQ13698 RNU6-247P-201ENST00000362636 107 ntBASIC-1.71□□□□□ -2.68
CACNA1SQ13698 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.71□□□□□ -2.68
CACNA1SQ13698 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.71□□□□□ -2.68
CACNA1SQ13698 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.71□□□□□ -2.68
CACNA1SQ13698 RNU6-987P-201ENST00000384759 104 ntBASIC-1.72□□□□□ -2.68
CACNA1SQ13698 RNU6-794P-201ENST00000517261 64 ntBASIC-1.72□□□□□ -2.68
CACNA1SQ13698 SNORD1B-201ENST00000363091 84 ntBASIC-1.73□□□□□ -2.69
CACNA1SQ13698 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.73□□□□□ -2.69
CACNA1SQ13698 RNU6-669P-201ENST00000365575 107 ntBASIC-1.73□□□□□ -2.69
CACNA1SQ13698 RNY4P18-201ENST00000391107 89 ntBASIC-1.73□□□□□ -2.69
CACNA1SQ13698 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.73□□□□□ -2.69
CACNA1SQ13698 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.73□□□□□ -2.69
CACNA1SQ13698 FTX_4.1-201ENST00000616291 147 ntBASIC-1.73□□□□□ -2.69
CACNA1SQ13698 SNORD60-201ENST00000383903 83 ntBASIC-1.73□□□□□ -2.69
CACNA1SQ13698 RNU6-982P-201ENST00000516216 102 ntBASIC-1.73□□□□□ -2.69
CACNA1SQ13698 MIR379-201ENST00000362218 67 ntBASIC-1.74□□□□□ -2.69
CACNA1SQ13698 RNU6-755P-201ENST00000364400 103 ntBASIC-1.74□□□□□ -2.69
CACNA1SQ13698 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.74□□□□□ -2.69
CACNA1SQ13698 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.74□□□□□ -2.69
CACNA1SQ13698 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.74□□□□□ -2.69
CACNA1SQ13698 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.74□□□□□ -2.69
CACNA1SQ13698 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.74□□□□□ -2.69
CACNA1SQ13698 RNU6-230P-201ENST00000362457 104 ntBASIC-1.75□□□□□ -2.69
CACNA1SQ13698 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.75□□□□□ -2.69
CACNA1SQ13698 SNORA19-201ENST00000384737 128 ntBASIC-1.75□□□□□ -2.69
CACNA1SQ13698 MIR548N-201ENST00000408742 75 ntBASIC-1.75□□□□□ -2.69
CACNA1SQ13698 RNU6-598P-201ENST00000364017 105 ntBASIC-1.75□□□□□ -2.69
CACNA1SQ13698 MIR1302-5-201ENST00000408164 150 ntBASIC-1.75□□□□□ -2.69
CACNA1SQ13698 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.75□□□□□ -2.69
CACNA1SQ13698 MTND4LP1-201ENST00000446263 157 ntBASIC-1.75□□□□□ -2.69
CACNA1SQ13698 MIR7978-201ENST00000636158 59 ntBASIC-1.75□□□□□ -2.69
CACNA1SQ13698 RNY1P1-201ENST00000364372 112 ntBASIC-1.76□□□□□ -2.69
CACNA1SQ13698 RNU6-129P-201ENST00000391022 107 ntBASIC-1.76□□□□□ -2.69
CACNA1SQ13698 AC074348.1-201ENST00000426503 132 ntBASIC-1.77□□□□□ -2.69
CACNA1SQ13698 RNU6-766P-201ENST00000362478 107 ntBASIC-1.77□□□□□ -2.69
CACNA1SQ13698 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.77□□□□□ -2.69
CACNA1SQ13698 MIR4668-201ENST00000582284 70 ntBASIC-1.77□□□□□ -2.69
CACNA1SQ13698 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.77□□□□□ -2.69
CACNA1SQ13698 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.78□□□□□ -2.69
CACNA1SQ13698 SNORD115-31-201ENST00000365318 82 ntBASIC-1.78□□□□□ -2.69
CACNA1SQ13698 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.78□□□□□ -2.69
CACNA1SQ13698 RNU6-523P-201ENST00000516304 54 ntBASIC-1.78□□□□□ -2.69
CACNA1SQ13698 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.78□□□□□ -2.69
CACNA1SQ13698 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.79□□□□□ -2.7
CACNA1SQ13698 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.79□□□□□ -2.7
CACNA1SQ13698 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.79□□□□□ -2.7
CACNA1SQ13698 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.79□□□□□ -2.7
CACNA1SQ13698 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.79□□□□□ -2.7
CACNA1SQ13698 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.79□□□□□ -2.7
CACNA1SQ13698 AP001318.4-201ENST00000616637 121 ntBASIC-1.79□□□□□ -2.7
CACNA1SQ13698 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.79□□□□□ -2.7
CACNA1SQ13698 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.79□□□□□ -2.7
CACNA1SQ13698 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.79□□□□□ -2.7
CACNA1SQ13698 SNORD113.1-201ENST00000363280 73 ntBASIC-1.8□□□□□ -2.7
CACNA1SQ13698 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.8□□□□□ -2.7
CACNA1SQ13698 SNORD116-14-201ENST00000383894 92 ntBASIC-1.8□□□□□ -2.7
CACNA1SQ13698 SNORD116-17-201ENST00000383929 92 ntBASIC-1.8□□□□□ -2.7
CACNA1SQ13698 SNORD116-15-201ENST00000384445 92 ntBASIC-1.8□□□□□ -2.7
CACNA1SQ13698 SNORD116-19-201ENST00000384729 92 ntBASIC-1.8□□□□□ -2.7
CACNA1SQ13698 SNORA41B-201ENST00000384785 128 ntBASIC-1.8□□□□□ -2.7
CACNA1SQ13698 RNU6-554P-201ENST00000410466 106 ntBASIC-1.8□□□□□ -2.7
CACNA1SQ13698 SNORA40.13-201ENST00000516379 120 ntBASIC-1.8□□□□□ -2.7
CACNA1SQ13698 U6.97-201ENST00000636904 101 ntBASIC-1.8□□□□□ -2.7
CACNA1SQ13698 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.8□□□□□ -2.7
CACNA1SQ13698 AC008267.6-201ENST00000441664 139 ntBASIC-1.8□□□□□ -2.7
CACNA1SQ13698 RNU6-162P-201ENST00000516228 103 ntBASIC-1.8□□□□□ -2.7
CACNA1SQ13698 RNU6-557P-201ENST00000516842 110 ntBASIC-1.8□□□□□ -2.7
CACNA1SQ13698 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.8□□□□□ -2.7
CACNA1SQ13698 RNU6-361P-201ENST00000364454 107 ntBASIC-1.81□□□□□ -2.7
CACNA1SQ13698 SNORA8.1-201ENST00000384250 140 ntBASIC-1.81□□□□□ -2.7
CACNA1SQ13698 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.81□□□□□ -2.7
CACNA1SQ13698 AC097484.2-201ENST00000509147 251 ntBASIC-1.81□□□□□ -2.7
CACNA1SQ13698 AC093729.1-201ENST00000513074 128 ntBASIC-1.81□□□□□ -2.7
CACNA1SQ13698 SNORD45.1-201ENST00000363181 77 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms