Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 RNU6-162P-201ENST00000516228 103 ntBASIC-3.61□□□□□ -2.99
HMGB3O15347 RNU6-426P-201ENST00000516464 97 ntBASIC-3.61□□□□□ -2.99
HMGB3O15347 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.61□□□□□ -2.99
HMGB3O15347 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.62□□□□□ -2.99
HMGB3O15347 AC074348.1-201ENST00000426503 132 ntBASIC-3.62□□□□□ -2.99
HMGB3O15347 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.62□□□□□ -2.99
HMGB3O15347 RNU6-694P-201ENST00000364071 147 ntBASIC-3.63□□□□□ -2.99
HMGB3O15347 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.63□□□□□ -2.99
HMGB3O15347 RNU6-804P-201ENST00000384286 107 ntBASIC-3.63□□□□□ -2.99
HMGB3O15347 RNU6-523P-201ENST00000516304 54 ntBASIC-3.63□□□□□ -2.99
HMGB3O15347 U6.95-201ENST00000636931 70 ntBASIC-3.63□□□□□ -2.99
HMGB3O15347 RNY1P1-201ENST00000364372 112 ntBASIC-3.64□□□□□ -2.99
HMGB3O15347 RNA5SP173-201ENST00000364857 136 ntBASIC-3.64□□□□□ -2.99
HMGB3O15347 RNY4P18-201ENST00000391107 89 ntBASIC-3.64□□□□□ -2.99
HMGB3O15347 MTCYBP9-201ENST00000431021 303 ntBASIC-3.64□□□□□ -2.99
HMGB3O15347 RNU6-557P-201ENST00000516842 110 ntBASIC-3.64□□□□□ -2.99
HMGB3O15347 RNU6-633P-201ENST00000362612 103 ntBASIC-3.65□□□□□ -2.99
HMGB3O15347 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.65□□□□□ -2.99
HMGB3O15347 MIR1302-3-201ENST00000408128 138 ntBASIC-3.65□□□□□ -2.99
HMGB3O15347 MIR7978-201ENST00000636158 59 ntBASIC-3.65□□□□□ -2.99
HMGB3O15347 Y_RNA.107-201ENST00000363190 121 ntBASIC-3.66□□□□□ -3
HMGB3O15347 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.66□□□□□ -3
HMGB3O15347 MIR581-201ENST00000384895 96 ntBASIC-3.66□□□□□ -3
HMGB3O15347 MIR5693-201ENST00000577722 73 ntBASIC-3.66□□□□□ -3
HMGB3O15347 AC008737.2-201ENST00000599446 118 ntBASIC-3.66□□□□□ -3
HMGB3O15347 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.67□□□□□ -3
HMGB3O15347 MIR590-201ENST00000385008 97 ntBASIC-3.67□□□□□ -3
HMGB3O15347 MIR125B1-201ENST00000385236 88 ntBASIC-3.67□□□□□ -3
HMGB3O15347 SNORA40-201ENST00000388090 126 ntBASIC-3.67□□□□□ -3
HMGB3O15347 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.68□□□□□ -3
HMGB3O15347 RNU6-668P-201ENST00000364180 107 ntBASIC-3.68□□□□□ -3
HMGB3O15347 MIR568-201ENST00000385036 95 ntBASIC-3.68□□□□□ -3
HMGB3O15347 MIR579-201ENST00000385221 98 ntBASIC-3.68□□□□□ -3
HMGB3O15347 AC093729.1-201ENST00000513074 128 ntBASIC-3.68□□□□□ -3
HMGB3O15347 RNU6-129P-201ENST00000391022 107 ntBASIC-3.69□□□□□ -3
HMGB3O15347 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.7□□□□□ -3
HMGB3O15347 SNORD60-201ENST00000383903 83 ntBASIC-3.71□□□□□ -3
HMGB3O15347 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.73□□□□□ -3.01
HMGB3O15347 RNU6-686P-201ENST00000364839 107 ntBASIC-3.73□□□□□ -3.01
HMGB3O15347 RNU6-172P-201ENST00000411000 93 ntBASIC-3.73□□□□□ -3.01
HMGB3O15347 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.73□□□□□ -3.01
HMGB3O15347 RNU6-974P-201ENST00000384099 108 ntBASIC-3.74□□□□□ -3.01
HMGB3O15347 MIR548N-201ENST00000408742 75 ntBASIC-3.74□□□□□ -3.01
HMGB3O15347 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.74□□□□□ -3.01
HMGB3O15347 SNORD113-3-201ENST00000364830 72 ntBASIC-3.75□□□□□ -3.01
HMGB3O15347 MIR606-201ENST00000384851 96 ntBASIC-3.75□□□□□ -3.01
HMGB3O15347 MIR1302-5-201ENST00000408164 150 ntBASIC-3.75□□□□□ -3.01
HMGB3O15347 Y_RNA.818-201ENST00000618813 71 ntBASIC-3.75□□□□□ -3.01
HMGB3O15347 RNU6-200P-201ENST00000364743 107 ntBASIC-3.76□□□□□ -3.01
HMGB3O15347 RNU6-257P-201ENST00000410238 98 ntBASIC-3.76□□□□□ -3.01
HMGB3O15347 RNU6-659P-201ENST00000516454 104 ntBASIC-3.76□□□□□ -3.01
HMGB3O15347 MIR8053-201ENST00000613344 75 ntBASIC-3.76□□□□□ -3.01
HMGB3O15347 SNORD113.1-201ENST00000363280 73 ntBASIC-3.77□□□□□ -3.01
HMGB3O15347 RNU6-520P-201ENST00000384717 104 ntBASIC-3.77□□□□□ -3.01
HMGB3O15347 RNY4P25-201ENST00000459254 96 ntBASIC-3.77□□□□□ -3.01
HMGB3O15347 AC004792.1-201ENST00000614523 137 ntBASIC-3.77□□□□□ -3.01
HMGB3O15347 MIR202-201ENST00000362219 110 ntBASIC-3.78□□□□□ -3.01
HMGB3O15347 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.78□□□□□ -3.01
HMGB3O15347 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.78□□□□□ -3.01
HMGB3O15347 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.78□□□□□ -3.01
HMGB3O15347 MTND5P41-201ENST00000517498 206 ntBASIC-3.78□□□□□ -3.01
HMGB3O15347 MIR4668-201ENST00000582284 70 ntBASIC-3.78□□□□□ -3.01
HMGB3O15347 MIRLET7A1-201ENST00000362295 80 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 RNU6-649P-201ENST00000384463 107 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 SNORD116-21-201ENST00000384507 92 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 RNU6-402P-201ENST00000410678 103 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 RNU6-109P-201ENST00000516364 107 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 RNU6-184P-201ENST00000516514 107 ntBASIC-3.79□□□□□ -3.02
HMGB3O15347 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.8□□□□□ -3.02
HMGB3O15347 MIR1297-201ENST00000637311 77 ntBASIC-3.8□□□□□ -3.02
HMGB3O15347 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.8□□□□□ -3.02
HMGB3O15347 RNU6-1325P-201ENST00000364905 105 ntBASIC-3.81□□□□□ -3.02
HMGB3O15347 MIR4801-201ENST00000582704 82 ntBASIC-3.81□□□□□ -3.02
HMGB3O15347 Y_RNA.290-201ENST00000364879 114 ntBASIC-3.82□□□□□ -3.02
HMGB3O15347 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-3.82□□□□□ -3.02
HMGB3O15347 RNU6-971P-201ENST00000516920 106 ntBASIC-3.82□□□□□ -3.02
HMGB3O15347 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.83□□□□□ -3.02
HMGB3O15347 Y_RNA.193-201ENST00000363979 102 ntBASIC-3.84□□□□□ -3.02
HMGB3O15347 RNU6-106P-201ENST00000384405 107 ntBASIC-3.84□□□□□ -3.02
HMGB3O15347 RNU6-738P-201ENST00000384531 106 ntBASIC-3.84□□□□□ -3.02
HMGB3O15347 MIR509-1-201ENST00000385265 94 ntBASIC-3.84□□□□□ -3.02
HMGB3O15347 MIR509-2-201ENST00000390724 91 ntBASIC-3.84□□□□□ -3.02
HMGB3O15347 RNU7-160P-201ENST00000516660 62 ntBASIC-3.84□□□□□ -3.02
HMGB3O15347 Y_RNA.489-201ENST00000384410 101 ntBASIC-3.85□□□□□ -3.03
HMGB3O15347 Y_RNA.620-201ENST00000411009 88 ntBASIC-3.85□□□□□ -3.03
HMGB3O15347 RNU6-755P-201ENST00000364400 103 ntBASIC-3.86□□□□□ -3.03
HMGB3O15347 SNORA17.4-201ENST00000391287 132 ntBASIC-3.86□□□□□ -3.03
HMGB3O15347 RNU6-834P-201ENST00000362367 110 ntBASIC-3.87□□□□□ -3.03
HMGB3O15347 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.87□□□□□ -3.03
HMGB3O15347 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.87□□□□□ -3.03
HMGB3O15347 RNU6-987P-201ENST00000384759 104 ntBASIC-3.87□□□□□ -3.03
HMGB3O15347 SNORA63.4-201ENST00000362763 126 ntBASIC-3.89□□□□□ -3.03
HMGB3O15347 RNU6-497P-201ENST00000365316 104 ntBASIC-3.89□□□□□ -3.03
HMGB3O15347 AL353621.2-201ENST00000605340 133 ntBASIC-3.89□□□□□ -3.03
HMGB3O15347 Y_RNA.219-201ENST00000364232 113 ntBASIC-3.9□□□□□ -3.03
HMGB3O15347 SNORD45A-201ENST00000384512 84 ntBASIC-3.9□□□□□ -3.03
HMGB3O15347 SNORA19-201ENST00000384737 128 ntBASIC-3.9□□□□□ -3.03
HMGB3O15347 MIR4484-201ENST00000582855 83 ntBASIC-3.9□□□□□ -3.03
Retrieved 100 of 98,524 protein–RNA pairs in 199.6 ms