Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU6-557P-201ENST00000516842 110 ntBASIC-1.35□□□□□ -2.63
CLCF1Q9UBD9 MALAT1.1-201ENST00000618249 95 ntBASIC-1.35□□□□□ -2.63
CLCF1Q9UBD9 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.36□□□□□ -2.63
CLCF1Q9UBD9 MIR548C-201ENST00000384815 97 ntBASIC-1.36□□□□□ -2.63
CLCF1Q9UBD9 RNU6-303P-201ENST00000517091 106 ntBASIC-1.36□□□□□ -2.63
CLCF1Q9UBD9 MIR3675-201ENST00000583661 73 ntBASIC-1.36□□□□□ -2.63
CLCF1Q9UBD9 AC091912.2-201ENST00000624798 167 ntBASIC-1.36□□□□□ -2.63
CLCF1Q9UBD9 MIR527-201ENST00000385244 85 ntBASIC-1.37□□□□□ -2.63
CLCF1Q9UBD9 AC132825.6-201ENST00000638861 357 ntBASIC-1.37□□□□□ -2.63
CLCF1Q9UBD9 RNU6-219P-201ENST00000364728 107 ntBASIC-1.38□□□□□ -2.63
CLCF1Q9UBD9 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.38□□□□□ -2.63
CLCF1Q9UBD9 RNY4P18-201ENST00000391107 89 ntBASIC-1.38□□□□□ -2.63
CLCF1Q9UBD9 MIR5683-201ENST00000636514 76 ntBASIC-1.38□□□□□ -2.63
CLCF1Q9UBD9 RNU6-330P-201ENST00000363015 107 ntBASIC-1.39□□□□□ -2.63
CLCF1Q9UBD9 RNA5SP192-201ENST00000364404 120 ntBASIC-1.39□□□□□ -2.63
CLCF1Q9UBD9 RNU6-686P-201ENST00000364839 107 ntBASIC-1.39□□□□□ -2.63
CLCF1Q9UBD9 RNU6-576P-201ENST00000390854 102 ntBASIC-1.39□□□□□ -2.63
CLCF1Q9UBD9 RNU6-402P-201ENST00000410678 103 ntBASIC-1.39□□□□□ -2.63
CLCF1Q9UBD9 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.39□□□□□ -2.63
CLCF1Q9UBD9 MIR3115-201ENST00000577915 68 ntBASIC-1.39□□□□□ -2.63
CLCF1Q9UBD9 MIR3165-201ENST00000579874 75 ntBASIC-1.39□□□□□ -2.63
CLCF1Q9UBD9 MIR548BB-201ENST00000626714 66 ntBASIC-1.39□□□□□ -2.63
CLCF1Q9UBD9 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.4□□□□□ -2.63
CLCF1Q9UBD9 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.41□□□□□ -2.64
CLCF1Q9UBD9 SNORA8.1-201ENST00000384250 140 ntBASIC-1.41□□□□□ -2.64
CLCF1Q9UBD9 AC090616.4-201ENST00000448026 115 ntBASIC-1.41□□□□□ -2.64
CLCF1Q9UBD9 MIR3910-1-201ENST00000580936 111 ntBASIC-1.41□□□□□ -2.64
CLCF1Q9UBD9 RNU6-497P-201ENST00000365316 104 ntBASIC-1.42□□□□□ -2.64
CLCF1Q9UBD9 MIR548Q-201ENST00000408404 100 ntBASIC-1.42□□□□□ -2.64
CLCF1Q9UBD9 RNU6-267P-201ENST00000516714 103 ntBASIC-1.42□□□□□ -2.64
CLCF1Q9UBD9 RNU6-706P-201ENST00000517229 104 ntBASIC-1.42□□□□□ -2.64
CLCF1Q9UBD9 MIR4520-1-201ENST00000582609 70 ntBASIC-1.42□□□□□ -2.64
CLCF1Q9UBD9 MIR4490-201ENST00000582647 84 ntBASIC-1.42□□□□□ -2.64
CLCF1Q9UBD9 AC138207.3-201ENST00000585289 166 ntBASIC-1.42□□□□□ -2.64
CLCF1Q9UBD9 RNU6-478P-201ENST00000363904 110 ntBASIC-1.43□□□□□ -2.64
CLCF1Q9UBD9 SNX3P1X-201ENST00000414887 175 ntBASIC-1.43□□□□□ -2.64
CLCF1Q9UBD9 RNU6-755P-201ENST00000364400 103 ntBASIC-1.44□□□□□ -2.64
CLCF1Q9UBD9 RNU6-129P-201ENST00000391022 107 ntBASIC-1.44□□□□□ -2.64
CLCF1Q9UBD9 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.44□□□□□ -2.64
CLCF1Q9UBD9 AC074348.1-201ENST00000426503 132 ntBASIC-1.44□□□□□ -2.64
CLCF1Q9UBD9 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.45□□□□□ -2.64
CLCF1Q9UBD9 RNU6-32P-201ENST00000383948 107 ntBASIC-1.45□□□□□ -2.64
CLCF1Q9UBD9 RNU6-13P-201ENST00000384248 107 ntBASIC-1.45□□□□□ -2.64
CLCF1Q9UBD9 RNU6-12P-201ENST00000384604 107 ntBASIC-1.45□□□□□ -2.64
CLCF1Q9UBD9 RNU6-41P-201ENST00000384741 107 ntBASIC-1.45□□□□□ -2.64
CLCF1Q9UBD9 RNU6-380P-201ENST00000410207 107 ntBASIC-1.45□□□□□ -2.64
CLCF1Q9UBD9 RNU6-982P-201ENST00000516216 102 ntBASIC-1.45□□□□□ -2.64
CLCF1Q9UBD9 RNU7-174P-201ENST00000516248 59 ntBASIC-1.45□□□□□ -2.64
CLCF1Q9UBD9 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.46□□□□□ -2.64
CLCF1Q9UBD9 SNORD45.1-201ENST00000363181 77 ntBASIC-1.46□□□□□ -2.64
CLCF1Q9UBD9 RNU6-164P-201ENST00000364604 103 ntBASIC-1.46□□□□□ -2.64
CLCF1Q9UBD9 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.46□□□□□ -2.64
CLCF1Q9UBD9 RNU6-604P-201ENST00000390917 100 ntBASIC-1.46□□□□□ -2.64
CLCF1Q9UBD9 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.46□□□□□ -2.64
CLCF1Q9UBD9 MIR1297-201ENST00000637311 77 ntBASIC-1.46□□□□□ -2.64
CLCF1Q9UBD9 MIR429-201ENST00000362106 83 ntBASIC-1.47□□□□□ -2.64
CLCF1Q9UBD9 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.47□□□□□ -2.64
CLCF1Q9UBD9 RNU6-458P-201ENST00000384179 107 ntBASIC-1.47□□□□□ -2.64
CLCF1Q9UBD9 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.47□□□□□ -2.64
CLCF1Q9UBD9 HLA-S-202ENST00000425174 53 ntBASIC-1.47□□□□□ -2.64
CLCF1Q9UBD9 U6.58-201ENST00000613107 107 ntBASIC-1.47□□□□□ -2.64
CLCF1Q9UBD9 RNU6-226P-201ENST00000363778 107 ntBASIC-1.48□□□□□ -2.65
CLCF1Q9UBD9 AC006160.2-201ENST00000637708 154 ntBASIC-1.48□□□□□ -2.65
CLCF1Q9UBD9 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.49□□□□□ -2.65
CLCF1Q9UBD9 SNORD113-1-201ENST00000365321 69 ntBASIC-1.49□□□□□ -2.65
CLCF1Q9UBD9 RNU6-675P-201ENST00000384236 104 ntBASIC-1.49□□□□□ -2.65
CLCF1Q9UBD9 MIR5591-201ENST00000578248 65 ntBASIC-1.49□□□□□ -2.65
CLCF1Q9UBD9 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.5□□□□□ -2.65
CLCF1Q9UBD9 MIR6502-201ENST00000617296 76 ntBASIC-1.5□□□□□ -2.65
CLCF1Q9UBD9 MIR4320-201ENST00000636981 65 ntBASIC-1.5□□□□□ -2.65
CLCF1Q9UBD9 MIR198-201ENST00000637333 62 ntBASIC-1.5□□□□□ -2.65
CLCF1Q9UBD9 MIR488-201ENST00000365739 83 ntBASIC-1.51□□□□□ -2.65
CLCF1Q9UBD9 MIR520D-201ENST00000385002 87 ntBASIC-1.51□□□□□ -2.65
CLCF1Q9UBD9 MTND4LP1-201ENST00000446263 157 ntBASIC-1.51□□□□□ -2.65
CLCF1Q9UBD9 RNU6-844P-201ENST00000517175 102 ntBASIC-1.51□□□□□ -2.65
CLCF1Q9UBD9 RNU6-698P-201ENST00000363523 107 ntBASIC-1.52□□□□□ -2.65
CLCF1Q9UBD9 RNU6-640P-201ENST00000363693 105 ntBASIC-1.52□□□□□ -2.65
CLCF1Q9UBD9 RNU6-598P-201ENST00000364017 105 ntBASIC-1.52□□□□□ -2.65
CLCF1Q9UBD9 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.52□□□□□ -2.65
CLCF1Q9UBD9 RNU6-34P-201ENST00000364874 107 ntBASIC-1.52□□□□□ -2.65
CLCF1Q9UBD9 RNU6-696P-201ENST00000390834 107 ntBASIC-1.52□□□□□ -2.65
CLCF1Q9UBD9 RNU6-630P-201ENST00000391258 106 ntBASIC-1.52□□□□□ -2.65
CLCF1Q9UBD9 RNU6-168P-201ENST00000516189 101 ntBASIC-1.52□□□□□ -2.65
CLCF1Q9UBD9 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.52□□□□□ -2.65
CLCF1Q9UBD9 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.53□□□□□ -2.65
CLCF1Q9UBD9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
CLCF1Q9UBD9 RNU6-587P-201ENST00000391282 106 ntBASIC-1.53□□□□□ -2.65
CLCF1Q9UBD9 U4.4-201ENST00000620626 117 ntBASIC-1.53□□□□□ -2.65
CLCF1Q9UBD9 U2.18-201ENST00000622185 84 ntBASIC-1.53□□□□□ -2.65
CLCF1Q9UBD9 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.54□□□□□ -2.66
CLCF1Q9UBD9 RNU6-608P-201ENST00000383927 104 ntBASIC-1.54□□□□□ -2.66
CLCF1Q9UBD9 MIR4484-201ENST00000582855 83 ntBASIC-1.54□□□□□ -2.66
CLCF1Q9UBD9 MIR548V-201ENST00000584165 80 ntBASIC-1.54□□□□□ -2.66
CLCF1Q9UBD9 MIR8053-201ENST00000613344 75 ntBASIC-1.54□□□□□ -2.66
CLCF1Q9UBD9 RNU6-147P-201ENST00000383983 107 ntBASIC-1.55□□□□□ -2.66
CLCF1Q9UBD9 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.55□□□□□ -2.66
CLCF1Q9UBD9 SNORA63.4-201ENST00000362763 126 ntBASIC-1.56□□□□□ -2.66
CLCF1Q9UBD9 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.56□□□□□ -2.66
CLCF1Q9UBD9 AL606753.1-201ENST00000427435 87 ntBASIC-1.56□□□□□ -2.66
CLCF1Q9UBD9 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms