Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNU6-972P-201ENST00000391208 107 ntBASIC-1.55□□□□□ -2.66
TREX1Q9NSU2 U4.4-201ENST00000620626 117 ntBASIC-1.55□□□□□ -2.66
TREX1Q9NSU2 RNU6-766P-201ENST00000362478 107 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 RNU6-698P-201ENST00000363523 107 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 RNU6-34P-201ENST00000364874 107 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 MIR548AA1-201ENST00000384971 97 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 RNU6-772P-201ENST00000516042 105 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 MIR548W-201ENST00000581970 74 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 AC013734.1-201ENST00000619329 111 ntBASIC-1.56□□□□□ -2.66
TREX1Q9NSU2 SNORD115-31-201ENST00000365318 82 ntBASIC-1.57□□□□□ -2.66
TREX1Q9NSU2 RNU6-887P-201ENST00000410660 100 ntBASIC-1.57□□□□□ -2.66
TREX1Q9NSU2 RNU7-153P-201ENST00000516455 62 ntBASIC-1.57□□□□□ -2.66
TREX1Q9NSU2 RNU6-118P-201ENST00000516552 102 ntBASIC-1.57□□□□□ -2.66
TREX1Q9NSU2 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.57□□□□□ -2.66
TREX1Q9NSU2 MIR3139-201ENST00000579145 76 ntBASIC-1.57□□□□□ -2.66
TREX1Q9NSU2 SNORD77.2-201ENST00000391045 68 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 snoU13.10-201ENST00000459301 103 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 RNU6-426P-201ENST00000516464 97 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 MIR4748-201ENST00000578076 82 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 MIR466-201ENST00000580653 84 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 AC005520.4-201ENST00000604337 90 ntBASIC-1.58□□□□□ -2.66
TREX1Q9NSU2 SNORD116-10-201ENST00000363791 102 ntBASIC-1.59□□□□□ -2.66
TREX1Q9NSU2 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.59□□□□□ -2.66
TREX1Q9NSU2 RNU6-537P-201ENST00000517277 103 ntBASIC-1.59□□□□□ -2.66
TREX1Q9NSU2 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.59□□□□□ -2.66
TREX1Q9NSU2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.59□□□□□ -2.66
TREX1Q9NSU2 RNU6-247P-201ENST00000362636 107 ntBASIC-1.6□□□□□ -2.67
TREX1Q9NSU2 MIR548V-201ENST00000584165 80 ntBASIC-1.6□□□□□ -2.67
TREX1Q9NSU2 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.6□□□□□ -2.67
TREX1Q9NSU2 SNORA27.2-201ENST00000363365 126 ntBASIC-1.61□□□□□ -2.67
TREX1Q9NSU2 RNU6-379P-201ENST00000363813 104 ntBASIC-1.61□□□□□ -2.67
TREX1Q9NSU2 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.61□□□□□ -2.67
TREX1Q9NSU2 SNORD116-16-201ENST00000384533 92 ntBASIC-1.61□□□□□ -2.67
TREX1Q9NSU2 MTND4LP9-201ENST00000427694 174 ntBASIC-1.61□□□□□ -2.67
TREX1Q9NSU2 RNU6-388P-201ENST00000517012 105 ntBASIC-1.61□□□□□ -2.67
TREX1Q9NSU2 RNU6-389P-201ENST00000517048 105 ntBASIC-1.61□□□□□ -2.67
TREX1Q9NSU2 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.62□□□□□ -2.67
TREX1Q9NSU2 U6.97-201ENST00000636904 101 ntBASIC-1.62□□□□□ -2.67
TREX1Q9NSU2 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.63□□□□□ -2.67
TREX1Q9NSU2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.63□□□□□ -2.67
TREX1Q9NSU2 SCARNA23-201ENST00000516060 130 ntBASIC-1.63□□□□□ -2.67
TREX1Q9NSU2 RNU6-982P-201ENST00000516216 102 ntBASIC-1.63□□□□□ -2.67
TREX1Q9NSU2 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.63□□□□□ -2.67
TREX1Q9NSU2 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.63□□□□□ -2.67
TREX1Q9NSU2 FTX_4.1-201ENST00000616291 147 ntBASIC-1.63□□□□□ -2.67
TREX1Q9NSU2 SNORD1B-201ENST00000363091 84 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 RNU6-463P-201ENST00000384340 107 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 MT-TM-201ENST00000387377 68 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 SNORD113-2-201ENST00000391082 72 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 MTND5P41-201ENST00000517498 206 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 MIR3675-201ENST00000583661 73 ntBASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.64□□□□□ -2.67
TREX1Q9NSU2 SNORD18C-201ENST00000362704 69 ntBASIC-1.65□□□□□ -2.67
TREX1Q9NSU2 RNU6-669P-201ENST00000365575 107 ntBASIC-1.65□□□□□ -2.67
TREX1Q9NSU2 SNORA40-201ENST00000388090 126 ntBASIC-1.65□□□□□ -2.67
TREX1Q9NSU2 RNU7-107P-201ENST00000459121 61 ntBASIC-1.65□□□□□ -2.67
TREX1Q9NSU2 AC097484.2-201ENST00000509147 251 ntBASIC-1.65□□□□□ -2.67
TREX1Q9NSU2 RNU6-904P-201ENST00000516206 101 ntBASIC-1.65□□□□□ -2.67
TREX1Q9NSU2 RNU6-330P-201ENST00000363015 107 ntBASIC-1.66□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.66□□□□□ -2.68
TREX1Q9NSU2 MIR630-201ENST00000384957 97 ntBASIC-1.66□□□□□ -2.68
TREX1Q9NSU2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.66□□□□□ -2.68
TREX1Q9NSU2 RNU6-604P-201ENST00000390917 100 ntBASIC-1.66□□□□□ -2.68
TREX1Q9NSU2 RNY3P8-201ENST00000411366 126 ntBASIC-1.66□□□□□ -2.68
TREX1Q9NSU2 RNU7-151P-201ENST00000516930 53 ntBASIC-1.66□□□□□ -2.68
TREX1Q9NSU2 RNU6-624P-201ENST00000363411 107 ntBASIC-1.67□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.67□□□□□ -2.68
TREX1Q9NSU2 SNORA41B-201ENST00000384785 128 ntBASIC-1.67□□□□□ -2.68
TREX1Q9NSU2 MIR519C-201ENST00000385053 87 ntBASIC-1.67□□□□□ -2.68
TREX1Q9NSU2 RNU6-995P-201ENST00000391244 107 ntBASIC-1.67□□□□□ -2.68
TREX1Q9NSU2 SNORD63.2-201ENST00000516303 64 ntBASIC-1.67□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.68□□□□□ -2.68
TREX1Q9NSU2 RNA5SP215-201ENST00000363440 122 ntBASIC-1.68□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.68□□□□□ -2.68
TREX1Q9NSU2 RNU6-523P-201ENST00000516304 54 ntBASIC-1.68□□□□□ -2.68
TREX1Q9NSU2 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.68□□□□□ -2.68
TREX1Q9NSU2 MIR7978-201ENST00000636158 59 ntBASIC-1.68□□□□□ -2.68
TREX1Q9NSU2 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 RNU6-694P-201ENST00000364071 147 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 RNU6-119P-201ENST00000364882 107 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 SNORA8.1-201ENST00000384250 140 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 MIR125B1-201ENST00000385236 88 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 RNU7-61P-201ENST00000515897 61 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 RNU6-182P-201ENST00000516970 105 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 AL353621.2-201ENST00000605340 133 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms