Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 MT-TR-201ENST00000387439 65 ntBASIC-1.57□□□□□ -2.66
RPAP3Q9H6T3 MIR4668-201ENST00000582284 70 ntBASIC-1.57□□□□□ -2.66
RPAP3Q9H6T3 MIR4490-201ENST00000582647 84 ntBASIC-1.57□□□□□ -2.66
RPAP3Q9H6T3 MIR2052-201ENST00000636055 55 ntBASIC-1.57□□□□□ -2.66
RPAP3Q9H6T3 RNU6-226P-201ENST00000363778 107 ntBASIC-1.58□□□□□ -2.66
RPAP3Q9H6T3 RNU6-478P-201ENST00000363904 110 ntBASIC-1.58□□□□□ -2.66
RPAP3Q9H6T3 MIR548C-201ENST00000384815 97 ntBASIC-1.58□□□□□ -2.66
RPAP3Q9H6T3 RNU6-168P-201ENST00000516189 101 ntBASIC-1.58□□□□□ -2.66
RPAP3Q9H6T3 MIR4770-201ENST00000579149 58 ntBASIC-1.58□□□□□ -2.66
RPAP3Q9H6T3 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.59□□□□□ -2.66
RPAP3Q9H6T3 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.59□□□□□ -2.66
RPAP3Q9H6T3 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.6□□□□□ -2.67
RPAP3Q9H6T3 MIR1468-201ENST00000410600 86 ntBASIC-1.6□□□□□ -2.67
RPAP3Q9H6T3 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.6□□□□□ -2.67
RPAP3Q9H6T3 RNU6-22P-201ENST00000384355 107 ntBASIC-1.61□□□□□ -2.67
RPAP3Q9H6T3 MIR4320-201ENST00000636981 65 ntBASIC-1.61□□□□□ -2.67
RPAP3Q9H6T3 MIR548Q-201ENST00000408404 100 ntBASIC-1.62□□□□□ -2.67
RPAP3Q9H6T3 AL031737.1-201ENST00000450125 223 ntBASIC-1.62□□□□□ -2.67
RPAP3Q9H6T3 AC093729.1-201ENST00000513074 128 ntBASIC-1.62□□□□□ -2.67
RPAP3Q9H6T3 RNU6-330P-201ENST00000363015 107 ntBASIC-1.63□□□□□ -2.67
RPAP3Q9H6T3 RNU6-624P-201ENST00000363411 107 ntBASIC-1.63□□□□□ -2.67
RPAP3Q9H6T3 RNA5SP86-201ENST00000390869 98 ntBASIC-1.63□□□□□ -2.67
RPAP3Q9H6T3 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.63□□□□□ -2.67
RPAP3Q9H6T3 RNU6-267P-201ENST00000516714 103 ntBASIC-1.63□□□□□ -2.67
RPAP3Q9H6T3 RNU6-645P-201ENST00000364649 106 ntBASIC-1.64□□□□□ -2.67
RPAP3Q9H6T3 RNU6-807P-201ENST00000516805 107 ntBASIC-1.64□□□□□ -2.67
RPAP3Q9H6T3 RNU6-458P-201ENST00000384179 107 ntBASIC-1.65□□□□□ -2.67
RPAP3Q9H6T3 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.65□□□□□ -2.67
RPAP3Q9H6T3 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.65□□□□□ -2.67
RPAP3Q9H6T3 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.65□□□□□ -2.67
RPAP3Q9H6T3 U6.58-201ENST00000613107 107 ntBASIC-1.65□□□□□ -2.67
RPAP3Q9H6T3 RNU6-608P-201ENST00000383927 104 ntBASIC-1.66□□□□□ -2.68
RPAP3Q9H6T3 SNORD116-22-201ENST00000384430 92 ntBASIC-1.66□□□□□ -2.68
RPAP3Q9H6T3 MIR520D-201ENST00000385002 87 ntBASIC-1.66□□□□□ -2.68
RPAP3Q9H6T3 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.67□□□□□ -2.68
RPAP3Q9H6T3 MIR548M-201ENST00000408260 86 ntBASIC-1.67□□□□□ -2.68
RPAP3Q9H6T3 RNU6-402P-201ENST00000410678 103 ntBASIC-1.67□□□□□ -2.68
RPAP3Q9H6T3 RNU6-79P-201ENST00000362511 107 ntBASIC-1.68□□□□□ -2.68
RPAP3Q9H6T3 AC018880.2-201ENST00000414265 201 ntBASIC-1.68□□□□□ -2.68
RPAP3Q9H6T3 RNU6-630P-201ENST00000391258 106 ntBASIC-1.69□□□□□ -2.68
RPAP3Q9H6T3 RNU7-174P-201ENST00000516248 59 ntBASIC-1.69□□□□□ -2.68
RPAP3Q9H6T3 RNU6-313P-201ENST00000516317 112 ntBASIC-1.69□□□□□ -2.68
RPAP3Q9H6T3 RNA5SP461-201ENST00000516451 104 ntBASIC-1.69□□□□□ -2.68
RPAP3Q9H6T3 MIR3675-201ENST00000583661 73 ntBASIC-1.69□□□□□ -2.68
RPAP3Q9H6T3 AP001318.4-201ENST00000616637 121 ntBASIC-1.69□□□□□ -2.68
RPAP3Q9H6T3 MALAT1.1-201ENST00000618249 95 ntBASIC-1.69□□□□□ -2.68
RPAP3Q9H6T3 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.7□□□□□ -2.68
RPAP3Q9H6T3 RNU6-219P-201ENST00000364728 107 ntBASIC-1.7□□□□□ -2.68
RPAP3Q9H6T3 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.7□□□□□ -2.68
RPAP3Q9H6T3 RNU6-696P-201ENST00000390834 107 ntBASIC-1.7□□□□□ -2.68
RPAP3Q9H6T3 MIR548H1-201ENST00000408610 102 ntBASIC-1.7□□□□□ -2.68
RPAP3Q9H6T3 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.7□□□□□ -2.68
RPAP3Q9H6T3 SNORA40.13-201ENST00000516379 120 ntBASIC-1.7□□□□□ -2.68
RPAP3Q9H6T3 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.7□□□□□ -2.68
RPAP3Q9H6T3 MIR548BB-201ENST00000626714 66 ntBASIC-1.7□□□□□ -2.68
RPAP3Q9H6T3 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.71□□□□□ -2.68
RPAP3Q9H6T3 MIR487B-201ENST00000385021 84 ntBASIC-1.71□□□□□ -2.68
RPAP3Q9H6T3 MIR601-201ENST00000385256 79 ntBASIC-1.71□□□□□ -2.68
RPAP3Q9H6T3 RNU6-400P-201ENST00000391173 106 ntBASIC-1.71□□□□□ -2.68
RPAP3Q9H6T3 RNU6-557P-201ENST00000516842 110 ntBASIC-1.71□□□□□ -2.68
RPAP3Q9H6T3 RNU6-303P-201ENST00000517091 106 ntBASIC-1.71□□□□□ -2.68
RPAP3Q9H6T3 RNU6-598P-201ENST00000364017 105 ntBASIC-1.72□□□□□ -2.68
RPAP3Q9H6T3 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.72□□□□□ -2.68
RPAP3Q9H6T3 RNY4P18-201ENST00000391107 89 ntBASIC-1.72□□□□□ -2.68
RPAP3Q9H6T3 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.72□□□□□ -2.68
RPAP3Q9H6T3 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.73□□□□□ -2.69
RPAP3Q9H6T3 RNU6-497P-201ENST00000365316 104 ntBASIC-1.73□□□□□ -2.69
RPAP3Q9H6T3 RNU6-982P-201ENST00000516216 102 ntBASIC-1.73□□□□□ -2.69
RPAP3Q9H6T3 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.74□□□□□ -2.69
RPAP3Q9H6T3 SNORA8.1-201ENST00000384250 140 ntBASIC-1.74□□□□□ -2.69
RPAP3Q9H6T3 RNU6-604P-201ENST00000390917 100 ntBASIC-1.74□□□□□ -2.69
RPAP3Q9H6T3 RNU6-587P-201ENST00000391282 106 ntBASIC-1.74□□□□□ -2.69
RPAP3Q9H6T3 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.74□□□□□ -2.69
RPAP3Q9H6T3 SNORD45.1-201ENST00000363181 77 ntBASIC-1.75□□□□□ -2.69
RPAP3Q9H6T3 U4.4-201ENST00000620626 117 ntBASIC-1.75□□□□□ -2.69
RPAP3Q9H6T3 U2.18-201ENST00000622185 84 ntBASIC-1.75□□□□□ -2.69
RPAP3Q9H6T3 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.76□□□□□ -2.69
RPAP3Q9H6T3 RNU6-686P-201ENST00000364839 107 ntBASIC-1.76□□□□□ -2.69
RPAP3Q9H6T3 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.76□□□□□ -2.69
RPAP3Q9H6T3 MIR4484-201ENST00000582855 83 ntBASIC-1.76□□□□□ -2.69
RPAP3Q9H6T3 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.77□□□□□ -2.69
RPAP3Q9H6T3 RNU6-563P-201ENST00000364872 108 ntBASIC-1.77□□□□□ -2.69
RPAP3Q9H6T3 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.77□□□□□ -2.69
RPAP3Q9H6T3 AC074348.1-201ENST00000426503 132 ntBASIC-1.77□□□□□ -2.69
RPAP3Q9H6T3 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.77□□□□□ -2.69
RPAP3Q9H6T3 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.78□□□□□ -2.69
RPAP3Q9H6T3 RNU6-540P-201ENST00000384622 101 ntBASIC-1.78□□□□□ -2.69
RPAP3Q9H6T3 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.79□□□□□ -2.7
RPAP3Q9H6T3 MIR488-201ENST00000365739 83 ntBASIC-1.79□□□□□ -2.7
RPAP3Q9H6T3 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.8□□□□□ -2.7
RPAP3Q9H6T3 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.8□□□□□ -2.7
RPAP3Q9H6T3 MIR3910-1-201ENST00000580936 111 ntBASIC-1.8□□□□□ -2.7
RPAP3Q9H6T3 MIR4723-201ENST00000585070 81 ntBASIC-1.8□□□□□ -2.7
RPAP3Q9H6T3 SNORD18.1-201ENST00000363807 70 ntBASIC-1.81□□□□□ -2.7
RPAP3Q9H6T3 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.81□□□□□ -2.7
RPAP3Q9H6T3 RNU6-129P-201ENST00000391022 107 ntBASIC-1.81□□□□□ -2.7
RPAP3Q9H6T3 RNU6-698P-201ENST00000363523 107 ntBASIC-1.82□□□□□ -2.7
RPAP3Q9H6T3 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.82□□□□□ -2.7
RPAP3Q9H6T3 RNU6-755P-201ENST00000364400 103 ntBASIC-1.82□□□□□ -2.7
RPAP3Q9H6T3 RNU6-34P-201ENST00000364874 107 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms