Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 MIR519A2-201ENST00000384990 87 ntBASIC-1.24□□□□□ -2.61
KLHDC3Q9BQ90 MIR889-201ENST00000401280 79 ntBASIC-1.24□□□□□ -2.61
KLHDC3Q9BQ90 RNU6-313P-201ENST00000516317 112 ntBASIC-1.24□□□□□ -2.61
KLHDC3Q9BQ90 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.25□□□□□ -2.61
KLHDC3Q9BQ90 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.25□□□□□ -2.61
KLHDC3Q9BQ90 MIR496-201ENST00000385226 102 ntBASIC-1.25□□□□□ -2.61
KLHDC3Q9BQ90 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.25□□□□□ -2.61
KLHDC3Q9BQ90 RNU6-732P-201ENST00000516033 103 ntBASIC-1.25□□□□□ -2.61
KLHDC3Q9BQ90 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.25□□□□□ -2.61
KLHDC3Q9BQ90 SNORA26.4-201ENST00000391188 123 ntBASIC-1.26□□□□□ -2.61
KLHDC3Q9BQ90 SNORD115-33-201ENST00000363723 82 ntBASIC-1.27□□□□□ -2.61
KLHDC3Q9BQ90 RNU6-983P-201ENST00000516004 103 ntBASIC-1.27□□□□□ -2.61
KLHDC3Q9BQ90 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.27□□□□□ -2.61
KLHDC3Q9BQ90 MIR450A1-201ENST00000362262 91 ntBASIC-1.28□□□□□ -2.61
KLHDC3Q9BQ90 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.28□□□□□ -2.61
KLHDC3Q9BQ90 RNU6-624P-201ENST00000363411 107 ntBASIC-1.28□□□□□ -2.61
KLHDC3Q9BQ90 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.28□□□□□ -2.61
KLHDC3Q9BQ90 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.28□□□□□ -2.61
KLHDC3Q9BQ90 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.28□□□□□ -2.61
KLHDC3Q9BQ90 AC093729.1-201ENST00000513074 128 ntBASIC-1.28□□□□□ -2.61
KLHDC3Q9BQ90 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.29□□□□□ -2.62
KLHDC3Q9BQ90 SNORD116-22-201ENST00000384430 92 ntBASIC-1.29□□□□□ -2.62
KLHDC3Q9BQ90 RNU6-656P-201ENST00000516785 107 ntBASIC-1.29□□□□□ -2.62
KLHDC3Q9BQ90 AC138207.3-201ENST00000585289 166 ntBASIC-1.29□□□□□ -2.62
KLHDC3Q9BQ90 SNORA40.13-201ENST00000516379 120 ntBASIC-1.3□□□□□ -2.62
KLHDC3Q9BQ90 MIR29B1-201ENST00000385015 81 ntBASIC-1.31□□□□□ -2.62
KLHDC3Q9BQ90 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.31□□□□□ -2.62
KLHDC3Q9BQ90 RNU6-118P-201ENST00000516552 102 ntBASIC-1.31□□□□□ -2.62
KLHDC3Q9BQ90 RNU6-807P-201ENST00000516805 107 ntBASIC-1.31□□□□□ -2.62
KLHDC3Q9BQ90 AP001318.4-201ENST00000616637 121 ntBASIC-1.31□□□□□ -2.62
KLHDC3Q9BQ90 MALAT1.1-201ENST00000618249 95 ntBASIC-1.31□□□□□ -2.62
KLHDC3Q9BQ90 AC132825.6-201ENST00000638861 357 ntBASIC-1.31□□□□□ -2.62
KLHDC3Q9BQ90 RNU2-51P-201ENST00000410708 197 ntBASIC-1.32□□□□□ -2.62
KLHDC3Q9BQ90 RNU6-557P-201ENST00000516842 110 ntBASIC-1.32□□□□□ -2.62
KLHDC3Q9BQ90 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.32□□□□□ -2.62
KLHDC3Q9BQ90 RNY4P18-201ENST00000391107 89 ntBASIC-1.33□□□□□ -2.62
KLHDC3Q9BQ90 SNORD63.1-201ENST00000516178 80 ntBASIC-1.33□□□□□ -2.62
KLHDC3Q9BQ90 U2.7-201ENST00000619197 100 ntBASIC-1.33□□□□□ -2.62
KLHDC3Q9BQ90 RNU6-645P-201ENST00000364649 106 ntBASIC-1.34□□□□□ -2.62
KLHDC3Q9BQ90 RNU6-219P-201ENST00000364728 107 ntBASIC-1.34□□□□□ -2.62
KLHDC3Q9BQ90 RNU6-497P-201ENST00000365316 104 ntBASIC-1.35□□□□□ -2.63
KLHDC3Q9BQ90 AL353691.2-201ENST00000443795 59 ntBASIC-1.35□□□□□ -2.63
KLHDC3Q9BQ90 RNU6-303P-201ENST00000517091 106 ntBASIC-1.35□□□□□ -2.63
KLHDC3Q9BQ90 MIR4770-201ENST00000579149 58 ntBASIC-1.35□□□□□ -2.63
KLHDC3Q9BQ90 MIR3910-1-201ENST00000580936 111 ntBASIC-1.35□□□□□ -2.63
KLHDC3Q9BQ90 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.35□□□□□ -2.63
KLHDC3Q9BQ90 SNORD18.1-201ENST00000363807 70 ntBASIC-1.36□□□□□ -2.63
KLHDC3Q9BQ90 RNU6-755P-201ENST00000364400 103 ntBASIC-1.36□□□□□ -2.63
KLHDC3Q9BQ90 RNU6-119P-201ENST00000364882 107 ntBASIC-1.36□□□□□ -2.63
KLHDC3Q9BQ90 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.36□□□□□ -2.63
KLHDC3Q9BQ90 MIR3675-201ENST00000583661 73 ntBASIC-1.36□□□□□ -2.63
KLHDC3Q9BQ90 RNU6-228P-201ENST00000362700 106 ntBASIC-1.37□□□□□ -2.63
KLHDC3Q9BQ90 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.37□□□□□ -2.63
KLHDC3Q9BQ90 RNU6-402P-201ENST00000410678 103 ntBASIC-1.37□□□□□ -2.63
KLHDC3Q9BQ90 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.37□□□□□ -2.63
KLHDC3Q9BQ90 RNA5SP93-201ENST00000362525 114 ntBASIC-1.38□□□□□ -2.63
KLHDC3Q9BQ90 SNORD113-1-201ENST00000365321 69 ntBASIC-1.38□□□□□ -2.63
KLHDC3Q9BQ90 SNORA8.1-201ENST00000384250 140 ntBASIC-1.38□□□□□ -2.63
KLHDC3Q9BQ90 MIR548BB-201ENST00000626714 66 ntBASIC-1.38□□□□□ -2.63
KLHDC3Q9BQ90 SNORD115-22-201ENST00000364456 82 ntBASIC-1.39□□□□□ -2.63
KLHDC3Q9BQ90 RNU6-686P-201ENST00000364839 107 ntBASIC-1.39□□□□□ -2.63
KLHDC3Q9BQ90 MIR6818-201ENST00000621576 65 ntBASIC-1.39□□□□□ -2.63
KLHDC3Q9BQ90 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.4□□□□□ -2.63
KLHDC3Q9BQ90 MIR548C-201ENST00000384815 97 ntBASIC-1.4□□□□□ -2.63
KLHDC3Q9BQ90 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.41□□□□□ -2.64
KLHDC3Q9BQ90 RNU6-32P-201ENST00000383948 107 ntBASIC-1.41□□□□□ -2.64
KLHDC3Q9BQ90 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.41□□□□□ -2.64
KLHDC3Q9BQ90 RNU6-13P-201ENST00000384248 107 ntBASIC-1.41□□□□□ -2.64
KLHDC3Q9BQ90 RNU6-12P-201ENST00000384604 107 ntBASIC-1.41□□□□□ -2.64
KLHDC3Q9BQ90 RNU6-246P-201ENST00000384702 107 ntBASIC-1.41□□□□□ -2.64
KLHDC3Q9BQ90 RNU6-41P-201ENST00000384741 107 ntBASIC-1.41□□□□□ -2.64
KLHDC3Q9BQ90 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.41□□□□□ -2.64
KLHDC3Q9BQ90 AC074348.1-201ENST00000426503 132 ntBASIC-1.41□□□□□ -2.64
KLHDC3Q9BQ90 RNU6-267P-201ENST00000516714 103 ntBASIC-1.41□□□□□ -2.64
KLHDC3Q9BQ90 MIR487B-201ENST00000385021 84 ntBASIC-1.42□□□□□ -2.64
KLHDC3Q9BQ90 RNA5SP86-201ENST00000390869 98 ntBASIC-1.42□□□□□ -2.64
KLHDC3Q9BQ90 MIR548AG1-201ENST00000579932 66 ntBASIC-1.42□□□□□ -2.64
KLHDC3Q9BQ90 RNU6-330P-201ENST00000363015 107 ntBASIC-1.43□□□□□ -2.64
KLHDC3Q9BQ90 RNU6-129P-201ENST00000391022 107 ntBASIC-1.43□□□□□ -2.64
KLHDC3Q9BQ90 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.43□□□□□ -2.64
KLHDC3Q9BQ90 RNU4-61P-201ENST00000411243 107 ntBASIC-1.43□□□□□ -2.64
KLHDC3Q9BQ90 U7.5-201ENST00000517224 61 ntBASIC-1.43□□□□□ -2.64
KLHDC3Q9BQ90 MIR6502-201ENST00000617296 76 ntBASIC-1.43□□□□□ -2.64
KLHDC3Q9BQ90 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.44□□□□□ -2.64
KLHDC3Q9BQ90 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.44□□□□□ -2.64
KLHDC3Q9BQ90 RNU6-576P-201ENST00000390854 102 ntBASIC-1.44□□□□□ -2.64
KLHDC3Q9BQ90 RNU6-604P-201ENST00000390917 100 ntBASIC-1.44□□□□□ -2.64
KLHDC3Q9BQ90 RNU7-88P-201ENST00000458752 63 ntBASIC-1.44□□□□□ -2.64
KLHDC3Q9BQ90 MIR1297-201ENST00000637311 77 ntBASIC-1.44□□□□□ -2.64
KLHDC3Q9BQ90 RNU6-675P-201ENST00000384236 104 ntBASIC-1.45□□□□□ -2.64
KLHDC3Q9BQ90 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.45□□□□□ -2.64
KLHDC3Q9BQ90 RNU7-174P-201ENST00000516248 59 ntBASIC-1.45□□□□□ -2.64
KLHDC3Q9BQ90 MIR4490-201ENST00000582647 84 ntBASIC-1.45□□□□□ -2.64
KLHDC3Q9BQ90 RNU6-640P-201ENST00000363693 105 ntBASIC-1.46□□□□□ -2.64
KLHDC3Q9BQ90 RNU6-478P-201ENST00000363904 110 ntBASIC-1.46□□□□□ -2.64
KLHDC3Q9BQ90 MIR488-201ENST00000365739 83 ntBASIC-1.46□□□□□ -2.64
KLHDC3Q9BQ90 MIR527-201ENST00000385244 85 ntBASIC-1.46□□□□□ -2.64
KLHDC3Q9BQ90 MIR548H1-201ENST00000408610 102 ntBASIC-1.46□□□□□ -2.64
KLHDC3Q9BQ90 RNU6-380P-201ENST00000410207 107 ntBASIC-1.46□□□□□ -2.64
KLHDC3Q9BQ90 SNORD45.1-201ENST00000363181 77 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms