Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNU6-520P-201ENST00000384717 104 ntBASIC-3.81□□□□□ -3.02
IFT140Q96RY7 MTND4LP1-201ENST00000446263 157 ntBASIC-3.81□□□□□ -3.02
IFT140Q96RY7 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.82□□□□□ -3.02
IFT140Q96RY7 SNORD45.1-201ENST00000363181 77 ntBASIC-3.82□□□□□ -3.02
IFT140Q96RY7 RNA5SP173-201ENST00000364857 136 ntBASIC-3.82□□□□□ -3.02
IFT140Q96RY7 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.82□□□□□ -3.02
IFT140Q96RY7 MIR4680-201ENST00000580906 66 ntBASIC-3.82□□□□□ -3.02
IFT140Q96RY7 MIR8062-201ENST00000621515 85 ntBASIC-3.82□□□□□ -3.02
IFT140Q96RY7 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.83□□□□□ -3.02
IFT140Q96RY7 RNU6-330P-201ENST00000363015 107 ntBASIC-3.84□□□□□ -3.02
IFT140Q96RY7 SNORD113-3-201ENST00000364830 72 ntBASIC-3.84□□□□□ -3.02
IFT140Q96RY7 SNORA33.2-201ENST00000365413 134 ntBASIC-3.84□□□□□ -3.02
IFT140Q96RY7 RNU6-974P-201ENST00000384099 108 ntBASIC-3.84□□□□□ -3.02
IFT140Q96RY7 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.84□□□□□ -3.02
IFT140Q96RY7 RNU6-649P-201ENST00000384463 107 ntBASIC-3.84□□□□□ -3.02
IFT140Q96RY7 RNU6-129P-201ENST00000391022 107 ntBASIC-3.84□□□□□ -3.02
IFT140Q96RY7 MIR548N-201ENST00000408742 75 ntBASIC-3.84□□□□□ -3.02
IFT140Q96RY7 RNU6-803P-201ENST00000516034 102 ntBASIC-3.84□□□□□ -3.02
IFT140Q96RY7 U7.2-201ENST00000607576 63 ntBASIC-3.84□□□□□ -3.02
IFT140Q96RY7 MIR202-201ENST00000362219 110 ntBASIC-3.85□□□□□ -3.03
IFT140Q96RY7 MIR125B1-201ENST00000385236 88 ntBASIC-3.85□□□□□ -3.03
IFT140Q96RY7 RNU6-172P-201ENST00000411000 93 ntBASIC-3.85□□□□□ -3.03
IFT140Q96RY7 SCARNA23-201ENST00000516060 130 ntBASIC-3.86□□□□□ -3.03
IFT140Q96RY7 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.86□□□□□ -3.03
IFT140Q96RY7 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.86□□□□□ -3.03
IFT140Q96RY7 Y_RNA.356-201ENST00000365475 113 ntBASIC-3.87□□□□□ -3.03
IFT140Q96RY7 SNORA8.1-201ENST00000384250 140 ntBASIC-3.87□□□□□ -3.03
IFT140Q96RY7 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.88□□□□□ -3.03
IFT140Q96RY7 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.88□□□□□ -3.03
IFT140Q96RY7 RNU6-668P-201ENST00000364180 107 ntBASIC-3.88□□□□□ -3.03
IFT140Q96RY7 MIR519C-201ENST00000385053 87 ntBASIC-3.88□□□□□ -3.03
IFT140Q96RY7 SNORD58.1-201ENST00000391313 66 ntBASIC-3.88□□□□□ -3.03
IFT140Q96RY7 AC022559.1-201ENST00000520905 205 ntBASIC-3.88□□□□□ -3.03
IFT140Q96RY7 Y_RNA.419-201ENST00000384041 102 ntBASIC-3.89□□□□□ -3.03
IFT140Q96RY7 RNU6-474P-201ENST00000384243 107 ntBASIC-3.89□□□□□ -3.03
IFT140Q96RY7 RNU6-182P-201ENST00000516970 105 ntBASIC-3.89□□□□□ -3.03
IFT140Q96RY7 RNU6-106P-201ENST00000384405 107 ntBASIC-3.9□□□□□ -3.03
IFT140Q96RY7 SNORA17.4-201ENST00000391287 132 ntBASIC-3.9□□□□□ -3.03
IFT140Q96RY7 RNU6-1135P-201ENST00000411083 103 ntBASIC-3.9□□□□□ -3.03
IFT140Q96RY7 RNU6-912P-201ENST00000363800 104 ntBASIC-3.91□□□□□ -3.03
IFT140Q96RY7 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.91□□□□□ -3.03
IFT140Q96RY7 SNORA81.3-201ENST00000517283 198 ntBASIC-3.92□□□□□ -3.04
IFT140Q96RY7 RNU6-834P-201ENST00000362367 110 ntBASIC-3.92□□□□□ -3.04
IFT140Q96RY7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.92□□□□□ -3.04
IFT140Q96RY7 RNU4-71P-201ENST00000516258 113 ntBASIC-3.92□□□□□ -3.04
IFT140Q96RY7 RNU6-303P-201ENST00000517091 106 ntBASIC-3.92□□□□□ -3.04
IFT140Q96RY7 RNU6-985P-201ENST00000410182 104 ntBASIC-3.93□□□□□ -3.04
IFT140Q96RY7 RNU6-635P-201ENST00000516651 102 ntBASIC-3.93□□□□□ -3.04
IFT140Q96RY7 RNU6-1137P-201ENST00000517073 99 ntBASIC-3.93□□□□□ -3.04
IFT140Q96RY7 SNORD115-37-201ENST00000363768 82 ntBASIC-3.94□□□□□ -3.04
IFT140Q96RY7 Y_RNA.649-201ENST00000459077 103 ntBASIC-3.94□□□□□ -3.04
IFT140Q96RY7 AC141273.2-201ENST00000618989 130 ntBASIC-3.94□□□□□ -3.04
IFT140Q96RY7 MIR379-201ENST00000362218 67 ntBASIC-3.95□□□□□ -3.04
IFT140Q96RY7 RNU6-623P-201ENST00000363143 105 ntBASIC-3.95□□□□□ -3.04
IFT140Q96RY7 Y_RNA.272-201ENST00000364696 102 ntBASIC-3.95□□□□□ -3.04
IFT140Q96RY7 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.96□□□□□ -3.04
IFT140Q96RY7 AL157777.2-201ENST00000258070 137 ntBASIC-3.97□□□□□ -3.04
IFT140Q96RY7 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.97□□□□□ -3.04
IFT140Q96RY7 RNU6-574P-201ENST00000384265 107 ntBASIC-3.97□□□□□ -3.04
IFT140Q96RY7 AP000770.2-201ENST00000623694 100 ntBASIC-3.97□□□□□ -3.04
IFT140Q96RY7 Y_RNA.20-201ENST00000362479 113 ntBASIC-3.98□□□□□ -3.05
IFT140Q96RY7 Y_RNA.431-201ENST00000384086 102 ntBASIC-3.98□□□□□ -3.05
IFT140Q96RY7 MIR4795-201ENST00000584182 89 ntBASIC-3.98□□□□□ -3.05
IFT140Q96RY7 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.98□□□□□ -3.05
IFT140Q96RY7 RNU7-61P-201ENST00000515897 61 ntBASIC-3.98□□□□□ -3.05
IFT140Q96RY7 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.98□□□□□ -3.05
IFT140Q96RY7 RNU6-624P-201ENST00000363411 107 ntBASIC-3.99□□□□□ -3.05
IFT140Q96RY7 RNU6-361P-201ENST00000364454 107 ntBASIC-3.99□□□□□ -3.05
IFT140Q96RY7 RNU7-160P-201ENST00000516660 62 ntBASIC-3.99□□□□□ -3.05
IFT140Q96RY7 AC072026.1-201ENST00000605023 201 ntBASIC-3.99□□□□□ -3.05
IFT140Q96RY7 RNU6-828P-201ENST00000364876 107 ntBASIC-4□□□□□ -3.05
IFT140Q96RY7 RNU6-904P-201ENST00000516206 101 ntBASIC-4□□□□□ -3.05
IFT140Q96RY7 MIR548X2-201ENST00000579776 100 ntBASIC-4□□□□□ -3.05
IFT140Q96RY7 Y_RNA.200-201ENST00000364018 102 ntBASIC-4.01□□□□□ -3.05
IFT140Q96RY7 RNU4-40P-201ENST00000364351 143 ntBASIC-4.01□□□□□ -3.05
IFT140Q96RY7 RNY4P25-201ENST00000459254 96 ntBASIC-4.02□□□□□ -3.05
IFT140Q96RY7 RNU6-772P-201ENST00000516042 105 ntBASIC-4.02□□□□□ -3.05
IFT140Q96RY7 Y_RNA.240-201ENST00000364469 95 ntBASIC-4.03□□□□□ -3.05
IFT140Q96RY7 AC074348.1-201ENST00000426503 132 ntBASIC-4.03□□□□□ -3.05
IFT140Q96RY7 RNU6-162P-201ENST00000516228 103 ntBASIC-4.03□□□□□ -3.05
IFT140Q96RY7 MIR5693-201ENST00000577722 73 ntBASIC-4.03□□□□□ -3.05
IFT140Q96RY7 Y_RNA.586-201ENST00000391146 98 ntBASIC-4.04□□□□□ -3.06
IFT140Q96RY7 AL589823.1-201ENST00000429577 183 ntBASIC-4.04□□□□□ -3.06
IFT140Q96RY7 Y_RNA.69-201ENST00000362885 109 ntBASIC-4.05□□□□□ -3.06
IFT140Q96RY7 RNU6-875P-201ENST00000516488 106 ntBASIC-4.05□□□□□ -3.06
IFT140Q96RY7 MIR8053-201ENST00000613344 75 ntBASIC-4.05□□□□□ -3.06
IFT140Q96RY7 SNORD113.1-201ENST00000363280 73 ntBASIC-4.05□□□□□ -3.06
IFT140Q96RY7 RNU6-530P-201ENST00000391180 107 ntBASIC-4.05□□□□□ -3.06
IFT140Q96RY7 Y_RNA.680-201ENST00000516441 93 ntBASIC-4.05□□□□□ -3.06
IFT140Q96RY7 Y_RNA.830-201ENST00000628531 96 ntBASIC-4.05□□□□□ -3.06
IFT140Q96RY7 MIR548AJ2-201ENST00000408539 92 ntBASIC-4.06□□□□□ -3.06
IFT140Q96RY7 RNU6-1211P-201ENST00000459179 105 ntBASIC-4.07□□□□□ -3.06
IFT140Q96RY7 Y_RNA.478-201ENST00000384358 107 ntBASIC-4.08□□□□□ -3.06
IFT140Q96RY7 AC093729.1-201ENST00000513074 128 ntBASIC-4.08□□□□□ -3.06
IFT140Q96RY7 U7.3-201ENST00000616123 62 ntBASIC-4.08□□□□□ -3.06
IFT140Q96RY7 Y_RNA.129-201ENST00000363392 110 ntBASIC-4.09□□□□□ -3.06
IFT140Q96RY7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-4.09□□□□□ -3.06
IFT140Q96RY7 RNU6-554P-201ENST00000410466 106 ntBASIC-4.09□□□□□ -3.06
IFT140Q96RY7 RNU6-557P-201ENST00000516842 110 ntBASIC-4.09□□□□□ -3.06
IFT140Q96RY7 AC134503.1-201ENST00000633048 54 ntBASIC-4.09□□□□□ -3.06
Retrieved 100 of 98,524 protein–RNA pairs in 215.3 ms