Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 RNU4-40P-201ENST00000364351 143 ntBASIC-6.05□□□□□ -3.38
TFF3Q07654 RNU4-85P-201ENST00000364675 123 ntBASIC-6.05□□□□□ -3.38
TFF3Q07654 RNU6-1241P-201ENST00000384536 107 ntBASIC-6.05□□□□□ -3.38
TFF3Q07654 RN7SKP298-201ENST00000515950 94 ntBASIC-6.05□□□□□ -3.38
TFF3Q07654 MIR5690-201ENST00000583739 73 ntBASIC-6.05□□□□□ -3.38
TFF3Q07654 Y_RNA.16-201ENST00000362421 102 ntBASIC-6.06□□□□□ -3.38
TFF3Q07654 Y_RNA.206-201ENST00000364136 102 ntBASIC-6.06□□□□□ -3.38
TFF3Q07654 SNORD116.2-201ENST00000391251 93 ntBASIC-6.06□□□□□ -3.38
TFF3Q07654 AL160413.1-201ENST00000622780 310 ntBASIC-6.06□□□□□ -3.38
TFF3Q07654 SNORA63.7-201ENST00000365579 123 ntBASIC-6.08□□□□□ -3.38
TFF3Q07654 SNORA26.8-201ENST00000391306 124 ntBASIC-6.08□□□□□ -3.38
TFF3Q07654 Y_RNA.96-201ENST00000363092 109 ntBASIC-6.09□□□□□ -3.38
TFF3Q07654 Y_RNA.335-201ENST00000365299 96 ntBASIC-6.09□□□□□ -3.38
TFF3Q07654 RNU6-493P-201ENST00000391321 108 ntBASIC-6.09□□□□□ -3.38
TFF3Q07654 MIR4509-3-201ENST00000578671 94 ntBASIC-6.09□□□□□ -3.38
TFF3Q07654 MIR4509-2-201ENST00000583920 94 ntBASIC-6.09□□□□□ -3.38
TFF3Q07654 AC015540.1-201ENST00000615828 501 ntBASIC-6.09□□□□□ -3.38
TFF3Q07654 MIR4509-1-201ENST00000618224 94 ntBASIC-6.09□□□□□ -3.38
TFF3Q07654 RNU6-795P-201ENST00000516323 103 ntBASIC-6.1□□□□□ -3.39
TFF3Q07654 RNU6-624P-201ENST00000363411 107 ntBASIC-6.11□□□□□ -3.39
TFF3Q07654 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-6.11□□□□□ -3.39
TFF3Q07654 RNU6-232P-201ENST00000517144 64 ntBASIC-6.11□□□□□ -3.39
TFF3Q07654 MIR4679-2-201ENST00000578358 77 ntBASIC-6.11□□□□□ -3.39
TFF3Q07654 RNU6-92P-201ENST00000605893 104 ntBASIC-6.11□□□□□ -3.39
TFF3Q07654 MIR3915-201ENST00000578518 97 ntBASIC-6.12□□□□□ -3.39
TFF3Q07654 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-6.12□□□□□ -3.39
TFF3Q07654 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-6.12□□□□□ -3.39
TFF3Q07654 RNU6-510P-201ENST00000391239 108 ntBASIC-6.13□□□□□ -3.39
TFF3Q07654 RNU6-836P-201ENST00000362920 107 ntBASIC-6.14□□□□□ -3.39
TFF3Q07654 MTATP6P25-201ENST00000574491 261 ntBASIC-6.14□□□□□ -3.39
TFF3Q07654 Y_RNA.218-201ENST00000364218 104 ntBASIC-6.15□□□□□ -3.39
TFF3Q07654 Y_RNA.496-201ENST00000384444 101 ntBASIC-6.15□□□□□ -3.39
TFF3Q07654 MIR519C-201ENST00000385053 87 ntBASIC-6.15□□□□□ -3.39
TFF3Q07654 RNU6-780P-201ENST00000391030 104 ntBASIC-6.16□□□□□ -3.4
TFF3Q07654 RNU4-14P-201ENST00000410858 122 ntBASIC-6.16□□□□□ -3.4
TFF3Q07654 SCARNA23-201ENST00000516060 130 ntBASIC-6.17□□□□□ -3.4
TFF3Q07654 RNU6-557P-201ENST00000516842 110 ntBASIC-6.17□□□□□ -3.4
TFF3Q07654 SNORA40.16-201ENST00000517238 121 ntBASIC-6.17□□□□□ -3.4
TFF3Q07654 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-6.17□□□□□ -3.4
TFF3Q07654 AC078883.4-201ENST00000623218 367 ntBASIC-6.17□□□□□ -3.4
TFF3Q07654 Y_RNA.29-201ENST00000362570 113 ntBASIC-6.18□□□□□ -3.4
TFF3Q07654 SNORA63.4-201ENST00000362763 126 ntBASIC-6.18□□□□□ -3.4
TFF3Q07654 RNU6-422P-201ENST00000384632 107 ntBASIC-6.19□□□□□ -3.4
TFF3Q07654 RNU6-876P-201ENST00000391295 104 ntBASIC-6.19□□□□□ -3.4
TFF3Q07654 RNU2-72P-201ENST00000411175 163 ntBASIC-6.19□□□□□ -3.4
TFF3Q07654 SNORD60.1-201ENST00000362451 73 ntBASIC-6.21□□□□□ -3.4
TFF3Q07654 RNU6-788P-201ENST00000390967 104 ntBASIC-6.21□□□□□ -3.4
TFF3Q07654 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-6.22□□□□□ -3.41
TFF3Q07654 Y_RNA.635-201ENST00000459041 101 ntBASIC-6.22□□□□□ -3.41
TFF3Q07654 U2.14-201ENST00000615943 113 ntBASIC-6.22□□□□□ -3.41
TFF3Q07654 AL035470.1-201ENST00000622571 220 ntBASIC-6.22□□□□□ -3.41
TFF3Q07654 Y_RNA.165-201ENST00000363721 102 ntBASIC-6.23□□□□□ -3.41
TFF3Q07654 SNORD37.2-201ENST00000391075 66 ntBASIC-6.23□□□□□ -3.41
TFF3Q07654 RNU7-125P-201ENST00000458760 62 ntBASIC-6.23□□□□□ -3.41
TFF3Q07654 RNU6-196P-201ENST00000384315 107 ntBASIC-6.24□□□□□ -3.41
TFF3Q07654 RNU5A-2P-201ENST00000384337 116 ntBASIC-6.24□□□□□ -3.41
TFF3Q07654 Y_RNA.661-201ENST00000516003 99 ntBASIC-6.24□□□□□ -3.41
TFF3Q07654 RNY3P15-201ENST00000516297 97 ntBASIC-6.24□□□□□ -3.41
TFF3Q07654 MIR5009-201ENST00000578736 100 ntBASIC-6.25□□□□□ -3.41
TFF3Q07654 MIR548AI-201ENST00000579940 88 ntBASIC-6.25□□□□□ -3.41
TFF3Q07654 Y_RNA.202-201ENST00000364083 110 ntBASIC-6.26□□□□□ -3.41
TFF3Q07654 SNORD45A-201ENST00000384512 84 ntBASIC-6.26□□□□□ -3.41
TFF3Q07654 RNY3P16-201ENST00000516338 101 ntBASIC-6.26□□□□□ -3.41
TFF3Q07654 U6.104-201ENST00000637979 90 ntBASIC-6.26□□□□□ -3.41
TFF3Q07654 RNU6-419P-201ENST00000517030 63 ntBASIC-6.27□□□□□ -3.41
TFF3Q07654 MIR1297-201ENST00000637311 77 ntBASIC-6.27□□□□□ -3.41
TFF3Q07654 RNU6-542P-201ENST00000516405 103 ntBASIC-6.28□□□□□ -3.41
TFF3Q07654 Y_RNA.84-201ENST00000363011 104 ntBASIC-6.29□□□□□ -3.42
TFF3Q07654 RNU6-686P-201ENST00000364839 107 ntBASIC-6.29□□□□□ -3.42
TFF3Q07654 MIR1302-11-201ENST00000408051 138 ntBASIC-6.29□□□□□ -3.42
TFF3Q07654 MIR1302-9-201ENST00000408365 138 ntBASIC-6.29□□□□□ -3.42
TFF3Q07654 MIR1302-10-201ENST00000408734 138 ntBASIC-6.29□□□□□ -3.42
TFF3Q07654 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-6.29□□□□□ -3.42
TFF3Q07654 MIR1302-2-201ENST00000607096 138 ntBASIC-6.29□□□□□ -3.42
TFF3Q07654 Y_RNA.532-201ENST00000384590 113 ntBASIC-6.3□□□□□ -3.42
TFF3Q07654 RNU7-119P-201ENST00000459279 63 ntBASIC-6.3□□□□□ -3.42
TFF3Q07654 Y_RNA.252-201ENST00000364556 101 ntBASIC-6.31□□□□□ -3.42
TFF3Q07654 RNU6-806P-201ENST00000365147 105 ntBASIC-6.31□□□□□ -3.42
TFF3Q07654 SNORD115.2-201ENST00000391126 59 ntBASIC-6.31□□□□□ -3.42
TFF3Q07654 RNU6-1325P-201ENST00000364905 105 ntBASIC-6.32□□□□□ -3.42
TFF3Q07654 RNU6-915P-201ENST00000364943 103 ntBASIC-6.32□□□□□ -3.42
TFF3Q07654 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-6.32□□□□□ -3.42
TFF3Q07654 SNORA40.15-201ENST00000516884 107 ntBASIC-6.34□□□□□ -3.42
TFF3Q07654 Y_RNA.544-201ENST00000384650 113 ntBASIC-6.35□□□□□ -3.43
TFF3Q07654 AL158147.1-201ENST00000443970 75 ntBASIC-6.35□□□□□ -3.43
TFF3Q07654 DNAJC19P2-201ENST00000593340 302 ntBASIC-6.35□□□□□ -3.43
TFF3Q07654 MIR4317-201ENST00000637586 65 ntBASIC-6.35□□□□□ -3.43
TFF3Q07654 RNU7-121P-201ENST00000516604 62 ntBASIC-6.36□□□□□ -3.43
TFF3Q07654 AP001318.4-201ENST00000616637 121 ntBASIC-6.36□□□□□ -3.43
TFF3Q07654 MIRLET7A1-201ENST00000362295 80 ntBASIC-6.37□□□□□ -3.43
TFF3Q07654 Y_RNA.292-201ENST00000364904 97 ntBASIC-6.37□□□□□ -3.43
TFF3Q07654 RNU6-162P-201ENST00000516228 103 ntBASIC-6.37□□□□□ -3.43
TFF3Q07654 RNU6-267P-201ENST00000516714 103 ntBASIC-6.37□□□□□ -3.43
TFF3Q07654 MTATP8P2-201ENST00000435212 202 ntBASIC-6.38□□□□□ -3.43
TFF3Q07654 AC109635.3-201ENST00000529536 185 ntBASIC-6.38□□□□□ -3.43
TFF3Q07654 SNORD116-24-201ENST00000384549 92 ntBASIC-6.39□□□□□ -3.43
TFF3Q07654 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-6.39□□□□□ -3.43
TFF3Q07654 SNORD127-201ENST00000458892 86 ntBASIC-6.39□□□□□ -3.43
TFF3Q07654 RNU6-239P-201ENST00000390990 99 ntBASIC-6.4□□□□□ -3.43
TFF3Q07654 RNU6-1043P-201ENST00000410355 99 ntBASIC-6.41□□□□□ -3.44
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms