Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 MIR3170-201ENST00000582699 77 ntBASIC-1.22□□□□□ -2.6
IRX3P78415 U4.4-201ENST00000620626 117 ntBASIC-1.22□□□□□ -2.6
IRX3P78415 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.23□□□□□ -2.61
IRX3P78415 RNU6-645P-201ENST00000364649 106 ntBASIC-1.23□□□□□ -2.61
IRX3P78415 AL035461.1-201ENST00000421490 332 ntBASIC-1.23□□□□□ -2.61
IRX3P78415 MIR581-201ENST00000384895 96 ntBASIC-1.24□□□□□ -2.61
IRX3P78415 RNU6-696P-201ENST00000390834 107 ntBASIC-1.24□□□□□ -2.61
IRX3P78415 RNY3P8-201ENST00000411366 126 ntBASIC-1.24□□□□□ -2.61
IRX3P78415 RNU7-174P-201ENST00000516248 59 ntBASIC-1.24□□□□□ -2.61
IRX3P78415 MIR4796-201ENST00000580742 81 ntBASIC-1.24□□□□□ -2.61
IRX3P78415 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
IRX3P78415 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.24□□□□□ -2.61
IRX3P78415 MIR198-201ENST00000637333 62 ntBASIC-1.24□□□□□ -2.61
IRX3P78415 RNA5SP405-201ENST00000363059 114 ntBASIC-1.25□□□□□ -2.61
IRX3P78415 RNU6-880P-201ENST00000384526 107 ntBASIC-1.25□□□□□ -2.61
IRX3P78415 MIR579-201ENST00000385221 98 ntBASIC-1.25□□□□□ -2.61
IRX3P78415 MIR601-201ENST00000385256 79 ntBASIC-1.25□□□□□ -2.61
IRX3P78415 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.25□□□□□ -2.61
IRX3P78415 RNU6-340P-201ENST00000364005 107 ntBASIC-1.26□□□□□ -2.61
IRX3P78415 SNORD58A-201ENST00000383875 65 ntBASIC-1.26□□□□□ -2.61
IRX3P78415 MT-TM-201ENST00000387377 68 ntBASIC-1.26□□□□□ -2.61
IRX3P78415 RNU6-587P-201ENST00000391282 106 ntBASIC-1.26□□□□□ -2.61
IRX3P78415 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.26□□□□□ -2.61
IRX3P78415 MIR1468-201ENST00000410600 86 ntBASIC-1.26□□□□□ -2.61
IRX3P78415 RNU6-887P-201ENST00000410660 100 ntBASIC-1.26□□□□□ -2.61
IRX3P78415 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.26□□□□□ -2.61
IRX3P78415 SCARNA23-201ENST00000516060 130 ntBASIC-1.26□□□□□ -2.61
IRX3P78415 SNORD116-10-201ENST00000363791 102 ntBASIC-1.27□□□□□ -2.61
IRX3P78415 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.27□□□□□ -2.61
IRX3P78415 SNORA41B-201ENST00000384785 128 ntBASIC-1.27□□□□□ -2.61
IRX3P78415 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.27□□□□□ -2.61
IRX3P78415 RNU7-107P-201ENST00000459121 61 ntBASIC-1.27□□□□□ -2.61
IRX3P78415 MIR548V-201ENST00000584165 80 ntBASIC-1.27□□□□□ -2.61
IRX3P78415 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.28□□□□□ -2.61
IRX3P78415 RNU6-841P-201ENST00000383872 107 ntBASIC-1.28□□□□□ -2.61
IRX3P78415 MIR630-201ENST00000384957 97 ntBASIC-1.28□□□□□ -2.61
IRX3P78415 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
IRX3P78415 SNORD77.2-201ENST00000391045 68 ntBASIC-1.28□□□□□ -2.61
IRX3P78415 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.28□□□□□ -2.61
IRX3P78415 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.28□□□□□ -2.61
IRX3P78415 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.29□□□□□ -2.62
IRX3P78415 RNU6-194P-201ENST00000363862 105 ntBASIC-1.29□□□□□ -2.62
IRX3P78415 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.29□□□□□ -2.62
IRX3P78415 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.29□□□□□ -2.62
IRX3P78415 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.29□□□□□ -2.62
IRX3P78415 MIR496-201ENST00000385226 102 ntBASIC-1.29□□□□□ -2.62
IRX3P78415 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.29□□□□□ -2.62
IRX3P78415 RNU6-162P-201ENST00000516228 103 ntBASIC-1.29□□□□□ -2.62
IRX3P78415 RNU6-659P-201ENST00000516454 104 ntBASIC-1.29□□□□□ -2.62
IRX3P78415 RNU6-807P-201ENST00000516805 107 ntBASIC-1.29□□□□□ -2.62
IRX3P78415 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.3□□□□□ -2.62
IRX3P78415 SNORD1B-201ENST00000363091 84 ntBASIC-1.3□□□□□ -2.62
IRX3P78415 RNU6-752P-201ENST00000516376 102 ntBASIC-1.3□□□□□ -2.62
IRX3P78415 RNU6-971P-201ENST00000516920 106 ntBASIC-1.3□□□□□ -2.62
IRX3P78415 U4.2-201ENST00000618561 85 ntBASIC-1.3□□□□□ -2.62
IRX3P78415 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.3□□□□□ -2.62
IRX3P78415 AC099654.10-201ENST00000640395 161 ntBASIC-1.3□□□□□ -2.62
IRX3P78415 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.31□□□□□ -2.62
IRX3P78415 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.31□□□□□ -2.62
IRX3P78415 RNU6-604P-201ENST00000390917 100 ntBASIC-1.31□□□□□ -2.62
IRX3P78415 SNORD113-2-201ENST00000391082 72 ntBASIC-1.31□□□□□ -2.62
IRX3P78415 RNU6-904P-201ENST00000516206 101 ntBASIC-1.31□□□□□ -2.62
IRX3P78415 SNORD33.1-201ENST00000516213 88 ntBASIC-1.31□□□□□ -2.62
IRX3P78415 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.31□□□□□ -2.62
IRX3P78415 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.32□□□□□ -2.62
IRX3P78415 MIR1236-201ENST00000408340 102 ntBASIC-1.32□□□□□ -2.62
IRX3P78415 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.32□□□□□ -2.62
IRX3P78415 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.33□□□□□ -2.62
IRX3P78415 RNU6-669P-201ENST00000365575 107 ntBASIC-1.33□□□□□ -2.62
IRX3P78415 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.33□□□□□ -2.62
IRX3P78415 AL450471.1-201ENST00000447509 127 ntBASIC-1.33□□□□□ -2.62
IRX3P78415 SNORD63.2-201ENST00000516303 64 ntBASIC-1.33□□□□□ -2.62
IRX3P78415 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.33□□□□□ -2.62
IRX3P78415 RNU7-151P-201ENST00000516930 53 ntBASIC-1.33□□□□□ -2.62
IRX3P78415 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.34□□□□□ -2.62
IRX3P78415 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.34□□□□□ -2.62
IRX3P78415 RNU7-61P-201ENST00000515897 61 ntBASIC-1.34□□□□□ -2.62
IRX3P78415 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.34□□□□□ -2.62
IRX3P78415 MIR7978-201ENST00000636158 59 ntBASIC-1.34□□□□□ -2.62
IRX3P78415 RNY4P27-201ENST00000363341 96 ntBASIC-1.35□□□□□ -2.63
IRX3P78415 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.35□□□□□ -2.63
IRX3P78415 MIR664A-201ENST00000626086 82 ntBASIC-1.35□□□□□ -2.63
IRX3P78415 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.36□□□□□ -2.63
IRX3P78415 SNORD116-21-201ENST00000384507 92 ntBASIC-1.36□□□□□ -2.63
IRX3P78415 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.36□□□□□ -2.63
IRX3P78415 MIR1302-5-201ENST00000408164 150 ntBASIC-1.36□□□□□ -2.63
IRX3P78415 RNU6-109P-201ENST00000516364 107 ntBASIC-1.36□□□□□ -2.63
IRX3P78415 RNU6-184P-201ENST00000516514 107 ntBASIC-1.36□□□□□ -2.63
IRX3P78415 RNU6-537P-201ENST00000517277 103 ntBASIC-1.36□□□□□ -2.63
IRX3P78415 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.36□□□□□ -2.63
IRX3P78415 RNU6-247P-201ENST00000362636 107 ntBASIC-1.37□□□□□ -2.63
IRX3P78415 RNU6-681P-201ENST00000364012 104 ntBASIC-1.37□□□□□ -2.63
IRX3P78415 SNORD113-3-201ENST00000364830 72 ntBASIC-1.37□□□□□ -2.63
IRX3P78415 RNU6-995P-201ENST00000391244 107 ntBASIC-1.37□□□□□ -2.63
IRX3P78415 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.37□□□□□ -2.63
IRX3P78415 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.37□□□□□ -2.63
IRX3P78415 RNU6-794P-201ENST00000517261 64 ntBASIC-1.37□□□□□ -2.63
IRX3P78415 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.37□□□□□ -2.63
IRX3P78415 RNU6-141P-201ENST00000410499 105 ntBASIC-1.38□□□□□ -2.63
IRX3P78415 MIR4484-201ENST00000582855 83 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 340.4 ms