Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SNORA8.1-201ENST00000384250 140 ntBASIC-1.8□□□□□ -2.7
CASP4P49662 RNU2-51P-201ENST00000410708 197 ntBASIC-1.81□□□□□ -2.7
CASP4P49662 RNU7-174P-201ENST00000516248 59 ntBASIC-1.81□□□□□ -2.7
CASP4P49662 AP002795.1-201ENST00000534879 84 ntBASIC-1.81□□□□□ -2.7
CASP4P49662 MIR429-201ENST00000362106 83 ntBASIC-1.82□□□□□ -2.7
CASP4P49662 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.82□□□□□ -2.7
CASP4P49662 RNU6-219P-201ENST00000364728 107 ntBASIC-1.82□□□□□ -2.7
CASP4P49662 RNU6-686P-201ENST00000364839 107 ntBASIC-1.82□□□□□ -2.7
CASP4P49662 RNA5SP331-201ENST00000364986 107 ntBASIC-1.82□□□□□ -2.7
CASP4P49662 RNU6-458P-201ENST00000384179 107 ntBASIC-1.82□□□□□ -2.7
CASP4P49662 RNU6-22P-201ENST00000384355 107 ntBASIC-1.82□□□□□ -2.7
CASP4P49662 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.82□□□□□ -2.7
CASP4P49662 SNORA40.13-201ENST00000516379 120 ntBASIC-1.82□□□□□ -2.7
CASP4P49662 U6.58-201ENST00000613107 107 ntBASIC-1.82□□□□□ -2.7
CASP4P49662 MALAT1.1-201ENST00000618249 95 ntBASIC-1.82□□□□□ -2.7
CASP4P49662 MIR450A1-201ENST00000362262 91 ntBASIC-1.83□□□□□ -2.7
CASP4P49662 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.83□□□□□ -2.7
CASP4P49662 RNU6-330P-201ENST00000363015 107 ntBASIC-1.83□□□□□ -2.7
CASP4P49662 RNU6-478P-201ENST00000363904 110 ntBASIC-1.83□□□□□ -2.7
CASP4P49662 RNU6-497P-201ENST00000365316 104 ntBASIC-1.83□□□□□ -2.7
CASP4P49662 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.83□□□□□ -2.7
CASP4P49662 AL078595.1-201ENST00000404458 226 ntBASIC-1.83□□□□□ -2.7
CASP4P49662 SNX3P1X-201ENST00000414887 175 ntBASIC-1.83□□□□□ -2.7
CASP4P49662 MIR3671-201ENST00000580455 88 ntBASIC-1.83□□□□□ -2.7
CASP4P49662 RNU6-604P-201ENST00000390917 100 ntBASIC-1.84□□□□□ -2.7
CASP4P49662 MIR548Q-201ENST00000408404 100 ntBASIC-1.84□□□□□ -2.7
CASP4P49662 RNU6-402P-201ENST00000410678 103 ntBASIC-1.84□□□□□ -2.7
CASP4P49662 AC074348.1-201ENST00000426503 132 ntBASIC-1.84□□□□□ -2.7
CASP4P49662 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.84□□□□□ -2.7
CASP4P49662 AP001318.4-201ENST00000616637 121 ntBASIC-1.84□□□□□ -2.7
CASP4P49662 RNU6-696P-201ENST00000390834 107 ntBASIC-1.85□□□□□ -2.71
CASP4P49662 MIR548BB-201ENST00000626714 66 ntBASIC-1.85□□□□□ -2.71
CASP4P49662 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.86□□□□□ -2.71
CASP4P49662 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.86□□□□□ -2.71
CASP4P49662 MIR198-201ENST00000637333 62 ntBASIC-1.86□□□□□ -2.71
CASP4P49662 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.88□□□□□ -2.71
CASP4P49662 SNORD45.1-201ENST00000363181 77 ntBASIC-1.88□□□□□ -2.71
CASP4P49662 RNU6-129P-201ENST00000391022 107 ntBASIC-1.88□□□□□ -2.71
CASP4P49662 RNU6-313P-201ENST00000516317 112 ntBASIC-1.88□□□□□ -2.71
CASP4P49662 AC091912.2-201ENST00000624798 167 ntBASIC-1.88□□□□□ -2.71
CASP4P49662 RNU6-698P-201ENST00000363523 107 ntBASIC-1.89□□□□□ -2.71
CASP4P49662 RNU6-34P-201ENST00000364874 107 ntBASIC-1.89□□□□□ -2.71
CASP4P49662 RNU6-587P-201ENST00000391282 106 ntBASIC-1.89□□□□□ -2.71
CASP4P49662 RNU6-982P-201ENST00000516216 102 ntBASIC-1.89□□□□□ -2.71
CASP4P49662 RNU6-267P-201ENST00000516714 103 ntBASIC-1.89□□□□□ -2.71
CASP4P49662 MIR1297-201ENST00000637311 77 ntBASIC-1.89□□□□□ -2.71
CASP4P49662 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.9□□□□□ -2.71
CASP4P49662 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.9□□□□□ -2.71
CASP4P49662 MIR548M-201ENST00000408260 86 ntBASIC-1.91□□□□□ -2.72
CASP4P49662 RNU6-380P-201ENST00000410207 107 ntBASIC-1.91□□□□□ -2.72
CASP4P49662 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.91□□□□□ -2.72
CASP4P49662 RPL35AP4-201ENST00000412007 102 ntBASIC-1.91□□□□□ -2.72
CASP4P49662 AC090616.4-201ENST00000448026 115 ntBASIC-1.91□□□□□ -2.72
CASP4P49662 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.92□□□□□ -2.72
CASP4P49662 RNY4P18-201ENST00000391107 89 ntBASIC-1.92□□□□□ -2.72
CASP4P49662 MIR889-201ENST00000401280 79 ntBASIC-1.92□□□□□ -2.72
CASP4P49662 MIR8485-201ENST00000401372 91 ntBASIC-1.92□□□□□ -2.72
CASP4P49662 AL627230.5-201ENST00000619807 58 ntBASIC-1.92□□□□□ -2.72
CASP4P49662 MIR6874-201ENST00000635894 71 ntBASIC-1.92□□□□□ -2.72
CASP4P49662 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.92□□□□□ -2.72
CASP4P49662 HLA-S-202ENST00000425174 53 ntBASIC-1.93□□□□□ -2.72
CASP4P49662 MTND4LP1-201ENST00000446263 157 ntBASIC-1.93□□□□□ -2.72
CASP4P49662 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.94□□□□□ -2.72
CASP4P49662 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.94□□□□□ -2.72
CASP4P49662 MIR601-201ENST00000385256 79 ntBASIC-1.94□□□□□ -2.72
CASP4P49662 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.94□□□□□ -2.72
CASP4P49662 RNA5SP461-201ENST00000516451 104 ntBASIC-1.94□□□□□ -2.72
CASP4P49662 RNU6-755P-201ENST00000364400 103 ntBASIC-1.95□□□□□ -2.72
CASP4P49662 RNU6-168P-201ENST00000516189 101 ntBASIC-1.95□□□□□ -2.72
CASP4P49662 U4.4-201ENST00000620626 117 ntBASIC-1.95□□□□□ -2.72
CASP4P49662 RNU6-675P-201ENST00000384236 104 ntBASIC-1.96□□□□□ -2.72
CASP4P49662 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.96□□□□□ -2.72
CASP4P49662 AC018880.2-201ENST00000414265 201 ntBASIC-1.96□□□□□ -2.72
CASP4P49662 MIR8053-201ENST00000613344 75 ntBASIC-1.96□□□□□ -2.72
CASP4P49662 MIR5591-201ENST00000578248 65 ntBASIC-1.97□□□□□ -2.72
CASP4P49662 MIR548V-201ENST00000584165 80 ntBASIC-1.97□□□□□ -2.72
CASP4P49662 MIR6502-201ENST00000617296 76 ntBASIC-1.97□□□□□ -2.72
CASP4P49662 AC006160.2-201ENST00000637708 154 ntBASIC-1.97□□□□□ -2.72
CASP4P49662 RNA5SP215-201ENST00000363440 122 ntBASIC-1.98□□□□□ -2.73
CASP4P49662 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.98□□□□□ -2.73
CASP4P49662 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.98□□□□□ -2.73
CASP4P49662 MIR4484-201ENST00000582855 83 ntBASIC-1.98□□□□□ -2.73
CASP4P49662 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.99□□□□□ -2.73
CASP4P49662 RNU6-32P-201ENST00000383948 107 ntBASIC-1.99□□□□□ -2.73
CASP4P49662 RNU6-13P-201ENST00000384248 107 ntBASIC-1.99□□□□□ -2.73
CASP4P49662 RNU6-12P-201ENST00000384604 107 ntBASIC-1.99□□□□□ -2.73
CASP4P49662 RNU6-41P-201ENST00000384741 107 ntBASIC-1.99□□□□□ -2.73
CASP4P49662 RNU6-630P-201ENST00000391258 106 ntBASIC-1.99□□□□□ -2.73
CASP4P49662 RNU6-844P-201ENST00000517175 102 ntBASIC-1.99□□□□□ -2.73
CASP4P49662 MIR4770-201ENST00000579149 58 ntBASIC-1.99□□□□□ -2.73
CASP4P49662 RNU6-598P-201ENST00000364017 105 ntBASIC-2□□□□□ -2.73
CASP4P49662 Y_RNA.340-201ENST00000365330 92 ntBASIC-2□□□□□ -2.73
CASP4P49662 MIR488-201ENST00000365739 83 ntBASIC-2□□□□□ -2.73
CASP4P49662 MT-TR-201ENST00000387439 65 ntBASIC-2□□□□□ -2.73
CASP4P49662 RNA5SP180-201ENST00000516181 101 ntBASIC-2□□□□□ -2.73
CASP4P49662 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.01□□□□□ -2.73
CASP4P49662 RNU6-668P-201ENST00000364180 107 ntBASIC-2.01□□□□□ -2.73
CASP4P49662 RNA5SP173-201ENST00000364857 136 ntBASIC-2.01□□□□□ -2.73
CASP4P49662 RNU6-400P-201ENST00000391173 106 ntBASIC-2.01□□□□□ -2.73
CASP4P49662 MIR4520-1-201ENST00000582609 70 ntBASIC-2.01□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms