Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNU6-200P-201ENST00000364743 107 ntBASIC-2.38□□□□□ -2.79
HLA-DMBP28068 RNU6-574P-201ENST00000384265 107 ntBASIC-2.38□□□□□ -2.79
HLA-DMBP28068 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.38□□□□□ -2.79
HLA-DMBP28068 RNU7-107P-201ENST00000459121 61 ntBASIC-2.38□□□□□ -2.79
HLA-DMBP28068 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.39□□□□□ -2.79
HLA-DMBP28068 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.39□□□□□ -2.79
HLA-DMBP28068 SNORD33.1-201ENST00000516213 88 ntBASIC-2.39□□□□□ -2.79
HLA-DMBP28068 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.39□□□□□ -2.79
HLA-DMBP28068 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.39□□□□□ -2.79
HLA-DMBP28068 Y_RNA.8-201ENST00000362353 102 ntBASIC-2.4□□□□□ -2.79
HLA-DMBP28068 RNU6-598P-201ENST00000364017 105 ntBASIC-2.4□□□□□ -2.79
HLA-DMBP28068 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.4□□□□□ -2.79
HLA-DMBP28068 MT-TM-201ENST00000387377 68 ntBASIC-2.4□□□□□ -2.79
HLA-DMBP28068 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.41□□□□□ -2.8
HLA-DMBP28068 U6.95-201ENST00000636931 70 ntBASIC-2.41□□□□□ -2.8
HLA-DMBP28068 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.42□□□□□ -2.8
HLA-DMBP28068 SNORA40-201ENST00000388090 126 ntBASIC-2.42□□□□□ -2.8
HLA-DMBP28068 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.42□□□□□ -2.8
HLA-DMBP28068 AC004792.1-201ENST00000614523 137 ntBASIC-2.42□□□□□ -2.8
HLA-DMBP28068 RNU7-61P-201ENST00000515897 61 ntBASIC-2.43□□□□□ -2.8
HLA-DMBP28068 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.43□□□□□ -2.8
HLA-DMBP28068 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.43□□□□□ -2.8
HLA-DMBP28068 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.43□□□□□ -2.8
HLA-DMBP28068 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.43□□□□□ -2.8
HLA-DMBP28068 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.43□□□□□ -2.8
HLA-DMBP28068 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.44□□□□□ -2.8
HLA-DMBP28068 RNU6-797P-201ENST00000363101 109 ntBASIC-2.44□□□□□ -2.8
HLA-DMBP28068 RNU6-698P-201ENST00000363523 107 ntBASIC-2.44□□□□□ -2.8
HLA-DMBP28068 RNU6-34P-201ENST00000364874 107 ntBASIC-2.44□□□□□ -2.8
HLA-DMBP28068 MIR519C-201ENST00000385053 87 ntBASIC-2.44□□□□□ -2.8
HLA-DMBP28068 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.44□□□□□ -2.8
HLA-DMBP28068 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.44□□□□□ -2.8
HLA-DMBP28068 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.45□□□□□ -2.8
HLA-DMBP28068 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.45□□□□□ -2.8
HLA-DMBP28068 RNA5SP93-201ENST00000362525 114 ntBASIC-2.46□□□□□ -2.8
HLA-DMBP28068 RNU6-867P-201ENST00000364956 107 ntBASIC-2.46□□□□□ -2.8
HLA-DMBP28068 MTND5P41-201ENST00000517498 206 ntBASIC-2.46□□□□□ -2.8
HLA-DMBP28068 U4.4-201ENST00000620626 117 ntBASIC-2.46□□□□□ -2.8
HLA-DMBP28068 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.47□□□□□ -2.8
HLA-DMBP28068 RNU6-257P-201ENST00000410238 98 ntBASIC-2.47□□□□□ -2.8
HLA-DMBP28068 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.47□□□□□ -2.8
HLA-DMBP28068 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.47□□□□□ -2.8
HLA-DMBP28068 MIR3170-201ENST00000582699 77 ntBASIC-2.47□□□□□ -2.8
HLA-DMBP28068 MIR466-201ENST00000580653 84 ntBASIC-2.48□□□□□ -2.81
HLA-DMBP28068 MIR4503-201ENST00000582187 83 ntBASIC-2.48□□□□□ -2.81
HLA-DMBP28068 MIR3675-201ENST00000583661 73 ntBASIC-2.48□□□□□ -2.81
HLA-DMBP28068 U2.18-201ENST00000622185 84 ntBASIC-2.48□□□□□ -2.81
HLA-DMBP28068 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.48□□□□□ -2.81
HLA-DMBP28068 RNU6-766P-201ENST00000362478 107 ntBASIC-2.5□□□□□ -2.81
HLA-DMBP28068 RNU6-624P-201ENST00000363411 107 ntBASIC-2.5□□□□□ -2.81
HLA-DMBP28068 SNORA63-201ENST00000363450 132 ntBASIC-2.5□□□□□ -2.81
HLA-DMBP28068 MIR548AA1-201ENST00000384971 97 ntBASIC-2.5□□□□□ -2.81
HLA-DMBP28068 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.5□□□□□ -2.81
HLA-DMBP28068 MTATP8P2-201ENST00000435212 202 ntBASIC-2.5□□□□□ -2.81
HLA-DMBP28068 U7.3-201ENST00000616123 62 ntBASIC-2.5□□□□□ -2.81
HLA-DMBP28068 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.51□□□□□ -2.81
HLA-DMBP28068 SNORD115-31-201ENST00000365318 82 ntBASIC-2.51□□□□□ -2.81
HLA-DMBP28068 MIR590-201ENST00000385008 97 ntBASIC-2.51□□□□□ -2.81
HLA-DMBP28068 RNU6-162P-201ENST00000516228 103 ntBASIC-2.51□□□□□ -2.81
HLA-DMBP28068 MIR548W-201ENST00000581970 74 ntBASIC-2.51□□□□□ -2.81
HLA-DMBP28068 MIR548V-201ENST00000584165 80 ntBASIC-2.51□□□□□ -2.81
HLA-DMBP28068 AL353621.2-201ENST00000605340 133 ntBASIC-2.51□□□□□ -2.81
HLA-DMBP28068 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.51□□□□□ -2.81
HLA-DMBP28068 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.52□□□□□ -2.81
HLA-DMBP28068 snoU13.10-201ENST00000459301 103 ntBASIC-2.52□□□□□ -2.81
HLA-DMBP28068 RNU6-330P-201ENST00000363015 107 ntBASIC-2.53□□□□□ -2.81
HLA-DMBP28068 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.53□□□□□ -2.81
HLA-DMBP28068 SNORD115-37-201ENST00000363768 82 ntBASIC-2.53□□□□□ -2.81
HLA-DMBP28068 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.53□□□□□ -2.81
HLA-DMBP28068 RNU6-604P-201ENST00000390917 100 ntBASIC-2.53□□□□□ -2.81
HLA-DMBP28068 RNU6-982P-201ENST00000516216 102 ntBASIC-2.53□□□□□ -2.81
HLA-DMBP28068 RNU6-659P-201ENST00000516454 104 ntBASIC-2.53□□□□□ -2.81
HLA-DMBP28068 RNY4-201ENST00000516507 96 ntBASIC-2.53□□□□□ -2.81
HLA-DMBP28068 RNU6-303P-201ENST00000517091 106 ntBASIC-2.53□□□□□ -2.81
HLA-DMBP28068 MIR4748-201ENST00000578076 82 ntBASIC-2.53□□□□□ -2.81
HLA-DMBP28068 AC013734.1-201ENST00000619329 111 ntBASIC-2.53□□□□□ -2.81
HLA-DMBP28068 RNU6-971P-201ENST00000516920 106 ntBASIC-2.54□□□□□ -2.82
HLA-DMBP28068 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.54□□□□□ -2.82
HLA-DMBP28068 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.55□□□□□ -2.82
HLA-DMBP28068 RNU6-196P-201ENST00000384315 107 ntBASIC-2.55□□□□□ -2.82
HLA-DMBP28068 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.55□□□□□ -2.82
HLA-DMBP28068 RNU6-633P-201ENST00000362612 103 ntBASIC-2.56□□□□□ -2.82
HLA-DMBP28068 RNU6-247P-201ENST00000362636 107 ntBASIC-2.56□□□□□ -2.82
HLA-DMBP28068 SNORA8.1-201ENST00000384250 140 ntBASIC-2.56□□□□□ -2.82
HLA-DMBP28068 SNORD116-21-201ENST00000384507 92 ntBASIC-2.56□□□□□ -2.82
HLA-DMBP28068 SNORD116-16-201ENST00000384533 92 ntBASIC-2.56□□□□□ -2.82
HLA-DMBP28068 MIR1302-5-201ENST00000408164 150 ntBASIC-2.56□□□□□ -2.82
HLA-DMBP28068 RNU6-182P-201ENST00000516970 105 ntBASIC-2.56□□□□□ -2.82
HLA-DMBP28068 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.56□□□□□ -2.82
HLA-DMBP28068 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.56□□□□□ -2.82
HLA-DMBP28068 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.57□□□□□ -2.82
HLA-DMBP28068 RNU6-557P-201ENST00000516842 110 ntBASIC-2.57□□□□□ -2.82
HLA-DMBP28068 RNU6-379P-201ENST00000363813 104 ntBASIC-2.58□□□□□ -2.82
HLA-DMBP28068 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.58□□□□□ -2.82
HLA-DMBP28068 AC074348.1-201ENST00000426503 132 ntBASIC-2.58□□□□□ -2.82
HLA-DMBP28068 FTX_4.1-201ENST00000616291 147 ntBASIC-2.58□□□□□ -2.82
HLA-DMBP28068 U6.97-201ENST00000636904 101 ntBASIC-2.58□□□□□ -2.82
HLA-DMBP28068 SNORD45.1-201ENST00000363181 77 ntBASIC-2.59□□□□□ -2.82
HLA-DMBP28068 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.59□□□□□ -2.82
HLA-DMBP28068 RNU7-200P-201ENST00000516105 62 ntBASIC-2.59□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms